Literature DB >> 2229371

Reproducibility and indices of discriminatory power of microbial typing methods.

P R Hunter1.   

Abstract

When microbial strain-typing methods are compared, the most important characteristics are typeability, reproducibility, and discriminatory power. While typeability and reproducibility can be presented as numerical values, indices of discriminatory power have only recently been described. This paper examines the relationship between reproducibility and indices of discriminatory power. In an individual typing method, an inverse relationship between reproducibility and discriminatory power appears as the number of test differences required in order to distinguish between strains is increased. A method of standardizing the discriminatory power of a typing method to a predetermined reproducibility is presented. In this way the discriminatory powers of different typing methods can be compared while being standardized for the effect of reproducibility.

Mesh:

Year:  1990        PMID: 2229371      PMCID: PMC268075          DOI: 10.1128/jcm.28.9.1903-1905.1990

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  7 in total

1.  Efficient selection of tests for bacteriological typing schemes.

Authors:  M A Gaston; P R Hunter
Journal:  J Clin Pathol       Date:  1989-07       Impact factor: 3.411

2.  Application of a numerical index of discriminatory power to a comparison of four physiochemical typing methods for Candida albicans.

Authors:  P R Hunter; C A Fraser
Journal:  J Clin Microbiol       Date:  1989-10       Impact factor: 5.948

Review 3.  Methods of multilocus enzyme electrophoresis for bacterial population genetics and systematics.

Authors:  R K Selander; D A Caugant; H Ochman; J M Musser; M N Gilmour; T S Whittam
Journal:  Appl Environ Microbiol       Date:  1986-05       Impact factor: 4.792

4.  Numerical index of the discriminatory ability of typing systems: an application of Simpson's index of diversity.

Authors:  P R Hunter; M A Gaston
Journal:  J Clin Microbiol       Date:  1988-11       Impact factor: 5.948

5.  Evaluation of a bacteriophage-typing scheme for Enterobacter cloacae.

Authors:  M A Gaston
Journal:  J Med Microbiol       Date:  1987-12       Impact factor: 2.472

6.  Fingerprinting Candida albicans.

Authors:  W Lee; J Burnie; R Matthews
Journal:  J Immunol Methods       Date:  1986-11-06       Impact factor: 2.303

7.  Comparison of two methods for bacteriocin typing of Serratia marcescens.

Authors:  P S Lai; Y F Ngeow; S D Puthucheary; C W Wang
Journal:  J Clin Microbiol       Date:  1983-01       Impact factor: 5.948

  7 in total
  146 in total

1.  Subtyping of Haemophilus influenzae strains by pulsed-field gel electrophoresis.

Authors:  M Saito; A Umeda; S i Yoshida
Journal:  J Clin Microbiol       Date:  1999-07       Impact factor: 5.948

Review 2.  Role of genomic typing in taxonomy, evolutionary genetics, and microbial epidemiology.

Authors:  A van Belkum; M Struelens; A de Visser; H Verbrugh; M Tibayrenc
Journal:  Clin Microbiol Rev       Date:  2001-07       Impact factor: 26.132

3.  Multicenter evaluation of epidemiological typing of methicillin-resistant Staphylococcus aureus strains by repetitive-element PCR analysis. The European Study Group on Epidemiological Markers of the ESCMID.

Authors:  A Deplano; A Schuermans; J Van Eldere; W Witte; H Meugnier; J Etienne; H Grundmann; D Jonas; G T Noordhoek; J Dijkstra; A van Belkum; W van Leeuwen; P T Tassios; N J Legakis; A van der Zee; A Bergmans; D S Blanc; F C Tenover; B C Cookson; G O'Neil; M J Struelens
Journal:  J Clin Microbiol       Date:  2000-10       Impact factor: 5.948

4.  Comparison of pulsed-field gel electrophoresis and coagulase gene restriction profile analysis techniques in the molecular typing of Staphylococcus aureus.

Authors:  C S Chiou; H L Wei; L C Yang
Journal:  J Clin Microbiol       Date:  2000-06       Impact factor: 5.948

5.  Method for optimizing pulsed-field gel electrophoresis banding pattern data.

Authors:  John E Warner; Andrew B Onderdonk
Journal:  J Mol Diagn       Date:  2003-02       Impact factor: 5.568

6.  Microsatellite analysis of three phylogenetic species of Paracoccidioides brasiliensis.

Authors:  Daniel R Matute; Victoria E Sepulveda; Lina M Quesada; Gustavo H Goldman; John W Taylor; Angela Restrepo; Juan G McEwen
Journal:  J Clin Microbiol       Date:  2006-06       Impact factor: 5.948

7.  Fast and simple epidemiological typing of Pseudomonas aeruginosa using the double-locus sequence typing (DLST) method.

Authors:  P Basset; D S Blanc
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2013-12-11       Impact factor: 3.267

8.  Validation of binary typing for Staphylococcus aureus strains.

Authors:  W van Leeuwen; H Verbrugh; J van der Velden; N van Leeuwen; M Heck; A van Belkum
Journal:  J Clin Microbiol       Date:  1999-03       Impact factor: 5.948

9.  A new method of antibiotyping yeasts for subspecies discrimination and distribution in human clinical specimens.

Authors:  G Quindós; V Lipperheide; B Barturen; R Alonso; J Bikandi; R San Millán; M Tellaetxe; L Ribacoba; J Pontón
Journal:  Eur J Epidemiol       Date:  1996-02       Impact factor: 8.082

10.  Utility of microsatellite markers and amplified fragment length polymorphism in the study of potentially ochratoxigenic black aspergilli.

Authors:  Alexandre Esteban; Su-lin L Leong; Ailsa D Hocking; M Lourdes Abarca; F Javier Cabañes; Nai Tran-Dinh
Journal:  Curr Microbiol       Date:  2008-07-31       Impact factor: 2.188

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