Literature DB >> 26682499

The Biochemical Evolution of Protein Complexes.

Todd M Greco1, Ileana M Cristea2.   

Abstract

Over the past decade, it became evident that proteins perform critical functions as components of specialized macromolecular complexes. Here, we discuss a recent study by Wan and colleagues, which highlights the significance of protein complexes by studying their conservation in organisms separated by up to a billion years of evolution.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Protein interactions; evolution; interactome; macromolecular complex; mass spectrometry; protein-protein interaction

Mesh：

Substances：

Year:  2015        PMID： 26682499      PMCID： PMC4706493          DOI： 10.1016/j.tibs.2015.11.007

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN： 0968-0004            Impact factor:   13.807


  9 in total

1.  A human interactome in three quantitative dimensions organized by stoichiometries and abundances.

Authors:  Marco Y Hein; Nina C Hubner; Ina Poser; Jürgen Cox; Nagarjuna Nagaraj; Yusuke Toyoda; Igor A Gak; Ina Weisswange; Jörg Mansfeld; Frank Buchholz; Anthony A Hyman; Matthias Mann
Journal:  Cell       Date:  2015-10-22       Impact factor: 41.582

2.  The BioPlex Network: A Systematic Exploration of the Human Interactome.

Authors:  Edward L Huttlin; Lily Ting; Raphael J Bruckner; Fana Gebreab; Melanie P Gygi; John Szpyt; Stanley Tam; Gabriela Zarraga; Greg Colby; Kurt Baltier; Rui Dong; Virginia Guarani; Laura Pontano Vaites; Alban Ordureau; Ramin Rad; Brian K Erickson; Martin Wühr; Joel Chick; Bo Zhai; Deepak Kolippakkam; Julian Mintseris; Robert A Obar; Tim Harris; Spyros Artavanis-Tsakonas; Mathew E Sowa; Pietro De Camilli; Joao A Paulo; J Wade Harper; Steven P Gygi
Journal:  Cell       Date:  2015-07-16       Impact factor: 41.582

3.  A protein complex network of Drosophila melanogaster.

Authors:  K G Guruharsha; Jean-François Rual; Bo Zhai; Julian Mintseris; Pujita Vaidya; Namita Vaidya; Chapman Beekman; Christina Wong; David Y Rhee; Odise Cenaj; Emily McKillip; Saumini Shah; Mark Stapleton; Kenneth H Wan; Charles Yu; Bayan Parsa; Joseph W Carlson; Xiao Chen; Bhaveen Kapadia; K VijayRaghavan; Steven P Gygi; Susan E Celniker; Robert A Obar; Spyros Artavanis-Tsakonas
Journal:  Cell       Date:  2011-10-28       Impact factor: 41.582

4.  CCDC22: a novel candidate gene for syndromic X-linked intellectual disability.

Authors:  I Voineagu; L Huang; K Winden; M Lazaro; E Haan; J Nelson; J McGaughran; L S Nguyen; K Friend; A Hackett; M Field; J Gecz; D Geschwind
Journal:  Mol Psychiatry       Date:  2011-08-09       Impact factor: 15.992

5.  Conserved patterns of protein interaction in multiple species.

Authors:  Roded Sharan; Silpa Suthram; Ryan M Kelley; Tanja Kuhn; Scott McCuine; Peter Uetz; Taylor Sittler; Richard M Karp; Trey Ideker
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-01       Impact factor: 11.205

6.  Interactions of the Antiviral Factor Interferon Gamma-Inducible Protein 16 (IFI16) Mediate Immune Signaling and Herpes Simplex Virus-1 Immunosuppression.

Authors:  Benjamin A Diner; Krystal K Lum; Aaron Javitt; Ileana M Cristea
Journal:  Mol Cell Proteomics       Date:  2015-02-18       Impact factor: 5.911

7.  Estimating the size of the human interactome.

Authors:  Michael P H Stumpf; Thomas Thorne; Eric de Silva; Ronald Stewart; Hyeong Jun An; Michael Lappe; Carsten Wiuf
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-12       Impact factor: 11.205

8.  Interplay between chaperones and protein disorder promotes the evolution of protein networks.

Authors:  Sebastian Pechmann; Judith Frydman
Journal:  PLoS Comput Biol       Date:  2014-06-26       Impact factor: 4.475

9.  Panorama of ancient metazoan macromolecular complexes.

Authors:  Cuihong Wan; Blake Borgeson; Sadhna Phanse; Fan Tu; Kevin Drew; Greg Clark; Xuejian Xiong; Olga Kagan; Julian Kwan; Alexandr Bezginov; Kyle Chessman; Swati Pal; Graham Cromar; Ophelia Papoulas; Zuyao Ni; Daniel R Boutz; Snejana Stoilova; Pierre C Havugimana; Xinghua Guo; Ramy H Malty; Mihail Sarov; Jack Greenblatt; Mohan Babu; W Brent Derry; Elisabeth R Tillier; John B Wallingford; John Parkinson; Edward M Marcotte; Andrew Emili
Journal:  Nature       Date:  2015-09-07       Impact factor: 49.962
  9 in total
  3 in total

Review 1.  Systems-wide Studies Uncover Commander, a Multiprotein Complex Essential to Human Development.

Authors:  Anna L Mallam; Edward M Marcotte
Journal:  Cell Syst       Date:  2017-05-24       Impact factor: 10.304

Review 2.  Self-Organization and Information Processing: From Basic Enzymatic Activities to Complex Adaptive Cellular Behavior.

Authors:  Ildefonso M De la Fuente; Luis Martínez; Jose Carrasco-Pujante; Maria Fedetz; José I López; Iker Malaina
Journal:  Front Genet       Date:  2021-05-21       Impact factor: 4.599

3.  Conservation and divergence of protein pathways in the vertebrate heart.

Authors:  Joel D Federspiel; Panna Tandon; Caralynn M Wilczewski; Lauren Wasson; Laura E Herring; Samvida S Venkatesh; Ileana M Cristea; Frank L Conlon
Journal:  PLoS Biol       Date:  2019-09-06       Impact factor: 8.029
  3 in total

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