Literature DB >> 26677226

The Chromatin Regulator BRPF3 Preferentially Activates the HBO1 Acetyltransferase but Is Dispensable for Mouse Development and Survival.

Kezhi Yan1, Linya You2, Cindy Degerny3, Mohammad Ghorbani2, Xin Liu3, Lulu Chen4, Lin Li2, Dengshun Miao4, Xiang-Jiao Yang5.   

Abstract

To interpret epigenetic information, chromatin readers utilize various protein domains for recognition of DNA and histone modifications. Some readers possess multidomains for modification recognition and are thus multivalent. Bromodomain- and plant homeodomain-linked finger-containing protein 3 (BRPF3) is such a chromatin reader, containing two plant homeodomain-linked fingers, one bromodomain and a PWWP domain. However, its molecular and biological functions remain to be investigated. Here, we report that endogenous BRPF3 preferentially forms a tetrameric complex with HBO1 (also known as KAT7) and two other subunits but not with related acetyltransferases such as MOZ, MORF, TIP60, and MOF (also known as KAT6A, KAT6B, KAT5, and KAT8, respectively). We have also characterized a mutant mouse strain with a lacZ reporter inserted at the Brpf3 locus. Systematic analysis of β-galactosidase activity revealed dynamic spatiotemporal expression of Brpf3 during mouse embryogenesis and high expression in the adult brain and testis. Brpf3 disruption, however, resulted in no obvious gross phenotypes. This is in stark contrast to Brpf1 and Brpf2, whose loss causes lethality at E9.5 and E15.5, respectively. In Brpf3-null mice and embryonic fibroblasts, RT-quantitative PCR uncovered no changes in levels of Brpf1 and Brpf2 transcripts, confirming no compensation from them. These results indicate that BRPF3 forms a functional tetrameric complex with HBO1 but is not required for mouse development and survival, thereby distinguishing BRPF3 from its paralogs, BRPF1 and BRPF2.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  chromatin modification; development; epigenetics; gene regulation; mouse genetics

Mesh:

Substances:

Year:  2015        PMID: 26677226      PMCID: PMC4742735          DOI: 10.1074/jbc.M115.703041

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.486


  74 in total

Review 1.  How chromatin-binding modules interpret histone modifications: lessons from professional pocket pickers.

Authors:  Sean D Taverna; Haitao Li; Alexander J Ruthenburg; C David Allis; Dinshaw J Patel
Journal:  Nat Struct Mol Biol       Date:  2007-11-05       Impact factor: 15.369

2.  Molecular basis of histone H3K36me3 recognition by the PWWP domain of Brpf1.

Authors:  Alessandro Vezzoli; Nicolas Bonadies; Mark D Allen; Stefan M V Freund; Clara M Santiveri; Brynn T Kvinlaug; Brian J P Huntly; Berthold Göttgens; Mark Bycroft
Journal:  Nat Struct Mol Biol       Date:  2010-04-18       Impact factor: 15.369

3.  HBO1 HAT complexes target chromatin throughout gene coding regions via multiple PHD finger interactions with histone H3 tail.

Authors:  Nehmé Saksouk; Nikita Avvakumov; Karen S Champagne; Tiffany Hung; Yannick Doyon; Christelle Cayrou; Eric Paquet; Mukta Ullah; Anne-Julie Landry; Valérie Côté; Xiang-Jiao Yang; Or Gozani; Tatiana G Kutateladze; Jacques Côté
Journal:  Mol Cell       Date:  2009-01-30       Impact factor: 17.970

4.  Role of Jade-1 in the histone acetyltransferase (HAT) HBO1 complex.

Authors:  Rebecca L Foy; Ihn Young Song; Vipul C Chitalia; Herbert T Cohen; Nehme Saksouk; Christelle Cayrou; Cyrus Vaziri; Jacques Côté; Maria V Panchenko
Journal:  J Biol Chem       Date:  2008-08-06       Impact factor: 5.157

5.  Molecular architecture of quartet MOZ/MORF histone acetyltransferase complexes.

Authors:  Mukta Ullah; Nadine Pelletier; Lin Xiao; Song Ping Zhao; Kainan Wang; Cindy Degerny; Soroush Tahmasebi; Christelle Cayrou; Yannick Doyon; Siew-Lee Goh; Nathalie Champagne; Jacques Côté; Xiang-Jiao Yang
Journal:  Mol Cell Biol       Date:  2008-09-15       Impact factor: 4.272

6.  The multidomain protein Brpf1 binds histones and is required for Hox gene expression and segmental identity.

Authors:  Kathrin Laue; Sylvain Daujat; Justin Gage Crump; Nikki Plaster; Henry H Roehl; Charles B Kimmel; Robert Schneider; Matthias Hammerschmidt
Journal:  Development       Date:  2008-06       Impact factor: 6.868

Review 7.  MOZ and MORF, two large MYSTic HATs in normal and cancer stem cells.

Authors:  X-J Yang; M Ullah
Journal:  Oncogene       Date:  2007-08-13       Impact factor: 9.867

Review 8.  MYST opportunities for growth control: yeast genes illuminate human cancer gene functions.

Authors:  A Lafon; C S Chang; E M Scott; S J Jacobson; L Pillus
Journal:  Oncogene       Date:  2007-08-13       Impact factor: 9.867

9.  Brpf1, a subunit of the MOZ histone acetyl transferase complex, maintains expression of anterior and posterior Hox genes for proper patterning of craniofacial and caudal skeletons.

Authors:  Kenta Hibiya; Takuo Katsumoto; Takashi Kondo; Issay Kitabayashi; Akira Kudo
Journal:  Dev Biol       Date:  2009-02-27       Impact factor: 3.582

10.  Agouti C57BL/6N embryonic stem cells for mouse genetic resources.

Authors:  Stephen J Pettitt; Qi Liang; Xin Y Rairdan; Jennifer L Moran; Haydn M Prosser; David R Beier; Kent C Lloyd; Allan Bradley; William C Skarnes
Journal:  Nat Methods       Date:  2009-06-14       Impact factor: 28.547

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  14 in total

Review 1.  Biological function and histone recognition of family IV bromodomain-containing proteins.

Authors:  Jonathan T Lloyd; Karen C Glass
Journal:  J Cell Physiol       Date:  2017-06-13       Impact factor: 6.384

2.  Histone acetyltransferase 7 (KAT7)-dependent intragenic histone acetylation regulates endothelial cell gene regulation.

Authors:  Matthew S Yan; Paul J Turgeon; Hon-Sum Jeffrey Man; Michelle K Dubinsky; J J David Ho; Suzan El-Rass; You-Dong Wang; Xiao-Yan Wen; Philip A Marsden
Journal:  J Biol Chem       Date:  2018-02-06       Impact factor: 5.157

3.  Mutations in the Chromatin Regulator Gene BRPF1 Cause Syndromic Intellectual Disability and Deficient Histone Acetylation.

Authors:  Kezhi Yan; Justine Rousseau; Rebecca Okashah Littlejohn; Courtney Kiss; Anna Lehman; Jill A Rosenfeld; Constance T R Stumpel; Alexander P A Stegmann; Laurie Robak; Fernando Scaglia; Thi Tuyet Mai Nguyen; He Fu; Norbert F Ajeawung; Maria Vittoria Camurri; Lin Li; Alice Gardham; Bianca Panis; Mohammed Almannai; Maria J Guillen Sacoto; Berivan Baskin; Claudia Ruivenkamp; Fan Xia; Weimin Bi; Megan T Cho; Thomas P Potjer; Gijs W E Santen; Michael J Parker; Natalie Canham; Margaret McKinnon; Lorraine Potocki; Jennifer J MacKenzie; Elizabeth R Roeder; Philippe M Campeau; Xiang-Jiao Yang
Journal:  Am J Hum Genet       Date:  2016-12-08       Impact factor: 11.025

4.  BRPF1 is essential for development of fetal hematopoietic stem cells.

Authors:  Linya You; Lin Li; Jinfeng Zou; Kezhi Yan; Jad Belle; Anastasia Nijnik; Edwin Wang; Xiang-Jiao Yang
Journal:  J Clin Invest       Date:  2016-08-08       Impact factor: 14.808

5.  Lysine acetyltransferase 8 is involved in cerebral development and syndromic intellectual disability.

Authors:  Lin Li; Mohammad Ghorbani; Monika Weisz-Hubshman; Justine Rousseau; Isabelle Thiffault; Rhonda E Schnur; Catherine Breen; Renske Oegema; Marjan Mm Weiss; Quinten Waisfisz; Sara Welner; Helen Kingston; Jordan A Hills; Elles Mj Boon; Lina Basel-Salmon; Osnat Konen; Hadassa Goldberg-Stern; Lily Bazak; Shay Tzur; Jianliang Jin; Xiuli Bi; Michael Bruccoleri; Kirsty McWalter; Megan T Cho; Maria Scarano; G Bradley Schaefer; Susan S Brooks; Susan Starling Hughes; K L I van Gassen; Johanna M van Hagen; Tej K Pandita; Pankaj B Agrawal; Philippe M Campeau; Xiang-Jiao Yang
Journal:  J Clin Invest       Date:  2020-03-02       Impact factor: 14.808

6.  Structural and mechanistic insights into regulation of HBO1 histone acetyltransferase activity by BRPF2.

Authors:  Ye Tao; Chen Zhong; Junjun Zhu; Shutong Xu; Jianping Ding
Journal:  Nucleic Acids Res       Date:  2017-06-02       Impact factor: 16.971

7.  Benzoisoquinolinediones as Potent and Selective Inhibitors of BRPF2 and TAF1/TAF1L Bromodomains.

Authors:  Léa Bouché; Clara D Christ; Stephan Siegel; Amaury E Fernández-Montalván; Simon J Holton; Oleg Fedorov; Antonius Ter Laak; Tatsuo Sugawara; Detlef Stöckigt; Cynthia Tallant; James Bennett; Octovia Monteiro; Laura Díaz-Sáez; Paulina Siejka; Julia Meier; Vera Pütter; Jörg Weiske; Susanne Müller; Kilian V M Huber; Ingo V Hartung; Bernard Haendler
Journal:  J Med Chem       Date:  2017-05-01       Impact factor: 7.446

8.  Deficient histone H3 propionylation by BRPF1-KAT6 complexes in neurodevelopmental disorders and cancer.

Authors:  Kezhi Yan; Justine Rousseau; Keren Machol; Laura A Cross; Katherine E Agre; Cynthia Forster Gibson; Anne Goverde; Kendra L Engleman; Hannah Verdin; Elfride De Baere; Lorraine Potocki; Dihong Zhou; Maxime Cadieux-Dion; Gary A Bellus; Monisa D Wagner; Rebecca J Hale; Natacha Esber; Alan F Riley; Benjamin D Solomon; Megan T Cho; Kirsty McWalter; Roy Eyal; Meagan K Hainlen; Bryce A Mendelsohn; Hillary M Porter; Brendan C Lanpher; Andrea M Lewis; Juliann Savatt; Isabelle Thiffault; Bert Callewaert; Philippe M Campeau; Xiang-Jiao Yang
Journal:  Sci Adv       Date:  2020-01-22       Impact factor: 14.136

9.  Myst2/Kat7 histone acetyltransferase interaction proteomics reveals tumour-suppressor Niam as a novel binding partner in embryonic stem cells.

Authors:  Mercedes Pardo; Lu Yu; Shihpei Shen; Peri Tate; Daniel Bode; Blake L Letney; Dawn E Quelle; William Skarnes; Jyoti S Choudhary
Journal:  Sci Rep       Date:  2017-08-15       Impact factor: 4.996

10.  BRPF3-HUWE1-mediated regulation of MYST2 is required for differentiation and cell-cycle progression in embryonic stem cells.

Authors:  Hye In Cho; Min Seong Kim; Jina Lee; Byong Chul Yoo; Kyung Hee Kim; Kwang-Min Choe; Yeun Kyu Jang
Journal:  Cell Death Differ       Date:  2020-06-18       Impact factor: 12.067

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