Literature DB >> 19187766

HBO1 HAT complexes target chromatin throughout gene coding regions via multiple PHD finger interactions with histone H3 tail.

Nehmé Saksouk1, Nikita Avvakumov, Karen S Champagne, Tiffany Hung, Yannick Doyon, Christelle Cayrou, Eric Paquet, Mukta Ullah, Anne-Julie Landry, Valérie Côté, Xiang-Jiao Yang, Or Gozani, Tatiana G Kutateladze, Jacques Côté.   

Abstract

The HBO1 HAT protein is the major source of histone H4 acetylation in vivo and has been shown to play critical roles in gene regulation and DNA replication. A distinctive characteristic of HBO1 HAT complexes is the presence of three PHD finger domains in two different subunits: tumor suppressor proteins ING4/5 and JADE1/2/3. Biochemical and functional analyses indicate that these domains interact with histone H3 N-terminal tail region, but with a different specificity toward its methylation status. Their combinatorial action is essential in regulating chromatin binding and substrate specificity of HBO1 complexes, as well as cell growth. Importantly, localization analyses on the human genome indicate that HBO1 complexes are enriched throughout the coding regions of genes, supporting a role in transcription elongation. These results underline the importance and versatility of PHD finger domains in regulating chromatin association and histone modification crosstalk within a single protein complex.

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Year:  2009        PMID: 19187766      PMCID: PMC2677731          DOI: 10.1016/j.molcel.2009.01.007

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  20 in total

Review 1.  Chromatin modifications and their function.

Authors:  Tony Kouzarides
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

2.  Molecular mechanism of histone H3K4me3 recognition by plant homeodomain of ING2.

Authors:  Pedro V Peña; Foteini Davrazou; Xiaobing Shi; Kay L Walter; Vladislav V Verkhusha; Or Gozani; Rui Zhao; Tatiana G Kutateladze
Journal:  Nature       Date:  2006-05-21       Impact factor: 49.962

3.  The landscape of histone modifications across 1% of the human genome in five human cell lines.

Authors:  Christoph M Koch; Robert M Andrews; Paul Flicek; Shane C Dillon; Ulaş Karaöz; Gayle K Clelland; Sarah Wilcox; David M Beare; Joanna C Fowler; Phillippe Couttet; Keith D James; Gregory C Lefebvre; Alexander W Bruce; Oliver M Dovey; Peter D Ellis; Pawandeep Dhami; Cordelia F Langford; Zhiping Weng; Ewan Birney; Nigel P Carter; David Vetrie; Ian Dunham
Journal:  Genome Res       Date:  2007-06       Impact factor: 9.043

4.  Jade-1, a candidate renal tumor suppressor that promotes apoptosis.

Authors:  Mina I Zhou; Rebecca L Foy; Vipul C Chitalia; Jin Zhao; Maria V Panchenko; Hongmei Wang; Herbert T Cohen
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-26       Impact factor: 11.205

5.  Detection of novel mRNA splice variants of human ING4 tumor suppressor gene.

Authors:  G Raho; C Miranda; E Tamborini; M A Pierotti; A Greco
Journal:  Oncogene       Date:  2007-02-26       Impact factor: 9.867

6.  ING tumor suppressor proteins are critical regulators of chromatin acetylation required for genome expression and perpetuation.

Authors:  Yannick Doyon; Christelle Cayrou; Mukta Ullah; Anne-Julie Landry; Valérie Côté; William Selleck; William S Lane; Song Tan; Xiang-Jiao Yang; Jacques Côté
Journal:  Mol Cell       Date:  2006-01-06       Impact factor: 17.970

7.  The menin tumor suppressor protein is an essential oncogenic cofactor for MLL-associated leukemogenesis.

Authors:  Akihiko Yokoyama; Tim C P Somervaille; Kevin S Smith; Orit Rozenblatt-Rosen; Matthew Meyerson; Michael L Cleary
Journal:  Cell       Date:  2005-10-21       Impact factor: 41.582

8.  ING4 mediates crosstalk between histone H3 K4 trimethylation and H3 acetylation to attenuate cellular transformation.

Authors:  Tiffany Hung; Olivier Binda; Karen S Champagne; Alex J Kuo; Kyle Johnson; Howard Y Chang; Matthew D Simon; Tatiana G Kutateladze; Or Gozani
Journal:  Mol Cell       Date:  2009-01-30       Impact factor: 17.970

9.  Disruptor of telomeric silencing-1 is a chromatin-specific histone H3 methyltransferase.

Authors:  Nicolas Lacoste; Rhea T Utley; Joanna M Hunter; Guy G Poirier; Jacques Côte
Journal:  J Biol Chem       Date:  2002-07-03       Impact factor: 5.157

10.  ING2 PHD domain links histone H3 lysine 4 methylation to active gene repression.

Authors:  Xiaobing Shi; Tao Hong; Kay L Walter; Mark Ewalt; Eriko Michishita; Tiffany Hung; Dylan Carney; Pedro Peña; Fei Lan; Mohan R Kaadige; Nicolas Lacoste; Christelle Cayrou; Foteini Davrazou; Anjanabha Saha; Bradley R Cairns; Donald E Ayer; Tatiana G Kutateladze; Yang Shi; Jacques Côté; Katrin F Chua; Or Gozani
Journal:  Nature       Date:  2006-05-21       Impact factor: 49.962

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  80 in total

1.  Conserved molecular interactions within the HBO1 acetyltransferase complexes regulate cell proliferation.

Authors:  Nikita Avvakumov; Marie-Eve Lalonde; Nehmé Saksouk; Eric Paquet; Karen C Glass; Anne-Julie Landry; Yannick Doyon; Christelle Cayrou; Geneviève A Robitaille; Darren E Richard; Xiang-Jiao Yang; Tatiana G Kutateladze; Jacques Côté
Journal:  Mol Cell Biol       Date:  2011-12-05       Impact factor: 4.272

2.  Inhibitor of growth-4 promotes IkappaB promoter activation to suppress NF-kappaB signaling and innate immunity.

Authors:  Andrew H Coles; Hugh Gannon; Anna Cerny; Evelyn Kurt-Jones; Stephen N Jones
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-07       Impact factor: 11.205

3.  Dynamic acetylation of all lysine-4 trimethylated histone H3 is evolutionarily conserved and mediated by p300/CBP.

Authors:  Nicholas T Crump; Catherine A Hazzalin; Erin M Bowers; Rhoda M Alani; Philip A Cole; Louis C Mahadevan
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-25       Impact factor: 11.205

Review 4.  The ING family tumor suppressors: from structure to function.

Authors:  Almass-Houd Aguissa-Touré; Ronald P C Wong; Gang Li
Journal:  Cell Mol Life Sci       Date:  2010-08-29       Impact factor: 9.261

Review 5.  The significance, development and progress of high-throughput combinatorial histone code analysis.

Authors:  Nicolas L Young; Peter A Dimaggio; Benjamin A Garcia
Journal:  Cell Mol Life Sci       Date:  2010-08-04       Impact factor: 9.261

Review 6.  MYST-family histone acetyltransferases: beyond chromatin.

Authors:  Vasileia Sapountzi; Jacques Côté
Journal:  Cell Mol Life Sci       Date:  2010-12-04       Impact factor: 9.261

7.  CpG island chromatin: a platform for gene regulation.

Authors:  Neil P Blackledge; Robert Klose
Journal:  Epigenetics       Date:  2011-02-01       Impact factor: 4.528

8.  HBO1 (KAT7) Does Not Have an Essential Role in Cell Proliferation, DNA Replication, or Histone 4 Acetylation in Human Cells.

Authors:  Anne K Voss; Tim Thomas; Andrew J Kueh; Samantha Eccles; Leonie Tang; Alexandra L Garnham; Rose E May; Marco J Herold; Gordon K Smyth
Journal:  Mol Cell Biol       Date:  2020-01-30       Impact factor: 4.272

9.  Identification of Phf16 and Pnpla3 as new adipogenic factors regulated by phytochemicals.

Authors:  Seo-Hyuk Chang; Ui Jeong Yun; Jin Hee Choi; Suji Kim; A Reum Lee; Dong Ho Lee; Min-Ju Seo; Vanja Panic; Claudio J Villanueva; No-Joon Song; Kye Won Park
Journal:  J Cell Biochem       Date:  2018-09-11       Impact factor: 4.429

10.  A novel non-coding RNA lncRNA-JADE connects DNA damage signalling to histone H4 acetylation.

Authors:  Guohui Wan; Xiaoxiao Hu; Yunhua Liu; Cecil Han; Anil K Sood; George A Calin; Xinna Zhang; Xiongbin Lu
Journal:  EMBO J       Date:  2013-10-04       Impact factor: 11.598

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