Literature DB >> 26676324

A unified Bayesian semiparametric approach to assess discrimination ability in survival analysis.

Lili Zhao1, Dai Feng2, Guoan Chen3, Jeremy M G Taylor1.   

Abstract

The discriminatory ability of a marker for censored survival data is routinely assessed by the time-dependent ROC curve and the c-index. The time-dependent ROC curve evaluates the ability of a biomarker to predict whether a patient lives past a particular time t. The c-index measures the global concordance of the marker and the survival time regardless of the time point. We propose a Bayesian semiparametric approach to estimate these two measures. The proposed estimators are based on the conditional distribution of the survival time given the biomarker and the empirical biomarker distribution. The conditional distribution is estimated by a linear-dependent Dirichlet process mixture model. The resulting ROC curve is smooth as it is estimated by a mixture of parametric functions. The proposed c-index estimator is shown to be more efficient than the commonly used Harrell's c-index since it uses all pairs of data rather than only informative pairs. The proposed estimators are evaluated through simulations and illustrated using a lung cancer dataset.
© 2015, The International Biometric Society.

Entities:  

Keywords:  AUC; Concordance; Diagnostic test; Linear-dependent Dirichlet process; ROC; Time-dependent ROC; c-index

Mesh:

Substances:

Year:  2015        PMID: 26676324      PMCID: PMC4899301          DOI: 10.1111/biom.12453

Source DB:  PubMed          Journal:  Biometrics        ISSN: 0006-341X            Impact factor:   2.571


  17 in total

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Journal:  J Stat Softw       Date:  2011-04-01       Impact factor: 6.440

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Journal:  Stat Med       Date:  2007-04-30       Impact factor: 2.373

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