Literature DB >> 26675328

Reading the Combinatorial Histone Language.

Zhangli Su1, John M Denu1.   

Abstract

Histones are subject to frequent combinatorial post-translational modifications (PTMs), forming a complex chemical "language" that is interpreted by PTM-specific histone-interacting protein modules (reader domains). These specific interactions are thought to instruct gene expression and downstream biological functions. While the majority of studies have focused on individual modifications, our current understanding of the combinatorial PTM patterns on histones is starting to emerge, benefiting from the convergence of multiple technologies. Here, we review the key technical advances and progress on discovery and characterization of combinatorial histone PTM patterns. We focus on the interactions between reader domains and combinatorial PTMs, which is essential for understanding the mechanism and biological meaning of establishing and interpreting information embedded in histone PTM patterns.

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Year:  2015        PMID: 26675328     DOI: 10.1021/acschembio.5b00864

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  22 in total

1.  Emerging Chemistry Strategies for Engineering Native Chromatin.

Authors:  Yael David; Tom W Muir
Journal:  J Am Chem Soc       Date:  2017-06-27       Impact factor: 15.419

2.  Establishment of a vernalization requirement in Brachypodium distachyon requires REPRESSOR OF VERNALIZATION1.

Authors:  Daniel P Woods; Thomas S Ream; Frédéric Bouché; Joohyun Lee; Nicholas Thrower; Curtis Wilkerson; Richard M Amasino
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-05       Impact factor: 11.205

3.  Developing Spindlin1 small-molecule inhibitors by using protein microarrays.

Authors:  Narkhyun Bae; Monica Viviano; Xiaonan Su; Jie Lv; Donghang Cheng; Cari Sagum; Sabrina Castellano; Xue Bai; Claire Johnson; Mahmoud Ibrahim Khalil; Jianjun Shen; Kaifu Chen; Haitao Li; Gianluca Sbardella; Mark T Bedford
Journal:  Nat Chem Biol       Date:  2017-05-15       Impact factor: 15.040

Review 4.  Epigenetic drug discovery: a success story for cofactor interference.

Authors:  A Ganesan
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-06-05       Impact factor: 6.237

5.  Engineered Reader Proteins for Enhanced Detection of Methylated Lysine on Histones.

Authors:  Katherine I Albanese; Mackenzie W Krone; Christopher J Petell; Madison M Parker; Brian D Strahl; Eric M Brustad; Marcey L Waters
Journal:  ACS Chem Biol       Date:  2019-11-01       Impact factor: 5.100

6.  A transcriptional coregulator, SPIN·DOC, attenuates the coactivator activity of Spindlin1.

Authors:  Narkhyun Bae; Min Gao; Xu Li; Tolkappiyan Premkumar; Gianluca Sbardella; Junjie Chen; Mark T Bedford
Journal:  J Biol Chem       Date:  2017-10-23       Impact factor: 5.157

Review 7.  Chemical and Physiological Features of Mitochondrial Acylation.

Authors:  Alison E Ringel; Sarah A Tucker; Marcia C Haigis
Journal:  Mol Cell       Date:  2018-11-15       Impact factor: 17.970

8.  Differentially Isotope-Labeled Nucleosomes To Study Asymmetric Histone Modification Crosstalk by Time-Resolved NMR Spectroscopy.

Authors:  Stamatios Liokatis; Rebecca Klingberg; Song Tan; Dirk Schwarzer
Journal:  Angew Chem Int Ed Engl       Date:  2016-05-24       Impact factor: 15.336

9.  Tandem Histone-Binding Domains Enhance the Activity of a Synthetic Chromatin Effector.

Authors:  Stefan J Tekel; Daniel A Vargas; Lusheng Song; Joshua LaBaer; Michael R Caplan; Karmella A Haynes
Journal:  ACS Synth Biol       Date:  2018-02-23       Impact factor: 5.110

10.  Capillary Zone Electrophoresis-Tandem Mass Spectrometry As an Alternative to Liquid Chromatography-Tandem Mass Spectrometry for Top-down Proteomics of Histones.

Authors:  Daoyang Chen; Zhichang Yang; Xiaojing Shen; Liangliang Sun
Journal:  Anal Chem       Date:  2021-03-02       Impact factor: 6.986

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