| Literature DB >> 26674973 |
José Carlos P Esperança1, William R R Miranda2, José B Netto2, Fabiane S Lima2, Leonardo Baumworcel2, Leila Chimelli1, Rosane Silva2, Turán P Ürményi2, Pedro H Cabello3, Edson Rondinelli4, Débora S Faffe2.
Abstract
Atherosclerosis is a complex disease, involving both genetic and environmental factors. However, the influence of genetic variations on its early development remains unclear. This study examined the association of 12 different polymorphisms with atherosclerosis severity in anterior descending coronary (DA, n = 103) and carotid arteries (CA, n = 66) of autopsied young adults (< 30 years old). Histological sections (H-E) were classified according to the American Heart Association. Polymorphisms in ACE, TNF-α (- 308G/A and - 238 G/A), IFN-γ (+ 874 A/T), MMP-9 (- 1562 C/T), IL-10 (- 1082 A/G and - 819 C/T), NOS3 (894 G/T), ApoA1 (rs964184), ApoE (E2E3E4 isoforms), and TGF-β (codons 25 and 10) genes were genotyped by gel electrophoresis or automatic DNA sequencing. Firearm projectile or car accident was the main cause of death, and no information about classical risk factors was available. Histological analysis showed high prevalence of type III atherosclerotic lesions in both DA (69%) and CA (39%) arteries, while severe type IV and V lesions were observed in 14% (DA) and 33% (CA). Allele frequencies and genotype distributions were determined. Among the polymorphisms studied, IFN-γ and IL-10 (- 1082 A/G) were related to atherosclerosis severity in DA artery. No association between genotypes and lesion severity was found in CA. In conclusion, we observed that the high prevalence of early atherosclerosis in young adults is associated with IFN-γ (p < 0.001) and IL-10 (p = 0.013) genotypes. This association is blood vessel dependent. Our findings suggest that the vascular system presents site specialization, and specific genetic variations may provide future biomarkers for early disease identification.Entities:
Keywords: Atherosclerosis; Coronary artery disease; IL-10; INF-γ; Polymorphisms
Year: 2015 PMID: 26674973 PMCID: PMC4661558 DOI: 10.1016/j.bbacli.2015.02.005
Source DB: PubMed Journal: BBA Clin ISSN: 2214-6474
Gene polymorphisms studied, primer sequences, and amplification conditions.
| Gene | Chr | SNPs | Pair of primers (5′–3′) | PCR conditions |
|---|---|---|---|---|
| ACE | 17 | 287 bp Ins/Del in intron 16 | F: CTGGAGACCACTCCCATCCTTTCT | 94 °C—1 m (30 cycles), 58 °C—1 m, 72 °C—2 m |
| R:GATGTGGCCATCACATTCGTCAGA | ||||
| TNF-α | 6 | − 308G/A | F: TCCTGCATCCTGTCTGGAAGT | 94 °C—30 s (35 cycles), 60 °C—45 s, 72 °C—1 m |
| − 238G/A | R: AGGGAGCGTCTGCTGGCTGGGTG | |||
| IFN-γ | 12 | + 874A/T | F: GGAACTTCGTTGCTCACTGGG | 94 °C—30 s (35 cycles), 58 °C—45 s, 72 °C—1 m |
| R: CTATTACATCTACTGTGC CTTCCTG | ||||
| IL-10 | 1 | − 819 T/C (rs1800871) | F: CTC GCT GCA ACC CAA CTG GC | 94 °C—30 s (35 cycles), 55 °C—45 s, 72 °C—1 m |
| − 1082A/G (rs1800896) | R: CCT AGG TCA CAG TGA CGT GG | |||
| MMP-9 | 20 | − 1562C/T | F: AATGCCTGGCACATAGTAGGCCCT | 95 °C—1 m (35 cycles), 62 °C—1 m, 72 °C—1 m |
| R: CTTTCTTCCTAGCCAGCCGGCATC | ||||
| NOS3 | 7 | + 894G/T (rs1799983) | F: AAGGCAGGAGACAGTGGATGGA | 94 °C—30 s (30 cycles), 60 °C—45 s, 72 °C—30 s |
| R: CCCAGTCAATCCCTTTGGTGCTCA | ||||
| ApoA1 | 11 | G/C (rs964184) | F: AGATACCCACACAGCTCACTCCC | 94 °C—30 s (30 cycles), 60 °C—45 s, 72 °C—30 s |
| R: CAGCACTGGCCTCTGTATTGACC | ||||
| ApoE | 19 | E2E3E4 isoforms | TaqMan assay | |
| TGF-β | Codon 25 (G/C) | F: GCCCTTCTCCCTGAGGACCTC | 94 °C—30 s (30 cycles), 60 °C—45 s, 72 °C—1 m | |
| Codon 10 (T/C) | R: GGCGAGCCGCAGCTTGGACAG |
Population characteristics.
| Characteristic | Number of cases (%) |
|---|---|
| 22 ± 5.4 years | |
| Male | 112 (92%) |
| Female | 10 (8%) |
| Slim | 40 (33%) |
| Regular | 71 (58%) |
| Obese | 11 (9%) |
| Light | 28 (23%) |
| Dark | 30 (25%) |
| Intermediate | 64 (52%) |
Fig. 1Photomicrographs representative of atherosclerotic lesion in anterior descending coronary (A, B) and carotid (C) arteries of autopsied young adults. (A) Type III atherosclerotic lesion, with foam cell deposition (arrow) and extracellular lipid pools (arrowhead), HE × 40 magnification. (B) Type V lesion, arrow shows vessel lumen partially occluded by fibrotic atheroma plaque (HE × 10 magnification). (C) type IV lesion, note intact epithelium, and well-defined necrotic core (asterisk) with cholesterol crystals (arrow), HE × 10 magnification.
Fig. 2Histological classification [according to the American Heart Association (AHA)] of atherosclerotic lesions in anterior descending coronary (DA) and carotid (CA) arteries from autopsied cases of young adults.
Allele frequencies (f) for studied genotypes in 122 autopsied young adults.
| SNP | Allele | All subjects ( | DA group ( | CA group ( |
|---|---|---|---|---|
| ACE (ins/del intron 16) ( | D | 0.604 | 0.636 | 0.594 |
| I | 0.396 | 0.374 | 0.406 | |
| TNF-α (− 238 G/A) ( | G | 0.953 | 0.956 | 0.938 |
| A | 0.047 | 0.044 | 0.063 | |
| TNF-α (− 308 G/A) ( | G | 0.787 | 0.791 | 0.787 |
| A | 0.213 | 0.209 | 0.213 | |
| IFN-γ (+ 874 T/A) ( | A | 0.757 | 0.763 | 0.712 |
| T | 0.243 | 0.237 | 0.288 | |
| MMP-9 (− 1562 C/T) ( | C | 0.868 | 0.871 | 0.883 |
| T | 0.132 | 0.129 | 0.117 | |
| IL-10 (− 1082 A/G) ( | A | 0.760 | 0.750 | 0.929 |
| G | 0.240 | 0.250 | 0.071 | |
| IL-10 (− 819 C/T) ( | T | 0.380 | 0.411 | 0.375 |
| C | 0.620 | 0.589 | 0.625 | |
| NOS3 (rs1799983) ( | G | 0.795 | 0.814 | 0.784 |
| T | 0.205 | 0.186 | 0.216 | |
| ApoA1 (rs964184) ( | C | 0.843 | 0.793 | 0.817 |
| G | 0.157 | 0.207 | 0.183 | |
| TGF-β (codon 25) ( | G | 0.941 | 0.935 | 0.957 |
| C | 0.059 | 0.065 | 0.043 | |
| TGF-β (codon 10) ( | T | 0.559 | 0.543 | 0.612 |
| C | 0.441 | 0.457 | 0.388 |
Association between genotype frequencies and atherosclerotic lesion severity in descendent coronary artery of autopsied young adults.
| SNP | Genotype | Atherosclerotic lesion in descendent anterior coronary artery (AHA classification) | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Normal | I | II | III | IV | V | VI | |||
| ACE (ins/del intron 16) ( | DD | 0.010 | 0.000 | 0.058 | 0.282 | 0.019 | 0.049 | 0.000 | |
| DI | 0.000 | 0.000 | 0.078 | 0.291 | 0.039 | 0.010 | 0.000 | ||
| II | 0.010 | 0.000 | 0.019 | 0.117 | 0.000 | 0.019 | 0.000 | ||
| TNF-α (− 238 G/A) ( | GG | 0.013 | 0.000 | 0.138 | 0.663 | 0.063 | 0.063 | 0.000 | |
| GA | 0.000 | 0.000 | 0.000 | 0.038 | 0.000 | 0.000 | 0.000 | ||
| AA | 0.000 | 0.000 | 0.000 | 0.025 | 0.000 | 0.000 | 0.000 | ||
| TNF-α (− 308 G/A) ( | GG | 0.013 | 0.000 | 0.076 | 0.494 | 0.038 | 0.051 | 0.000 | |
| GA | 0.000 | 0.000 | 0.051 | 0.165 | 0.013 | 0.013 | 0.000 | ||
| AA | 0.000 | 0.000 | 0.013 | 0.063 | 0.013 | 0.000 | 0.000 | ||
| IFN-γ (+ 874 T/A) ( | AA | 0.020 | 0.000 | 0.041 | 0.439 | 0.041 | 0.051 | 0.000 | |
| AT | 0.000 | 0.000 | 0.112 | 0.204 | 0.010 | 0.000 | 0.000 | ||
| TT | 0.000 | 0.000 | 0.010 | 0.051 | 0.000 | 0.020 | 0.000 | ||
| MMP-9 (− 1562 C/T) ( | CC | 0.000 | 0.000 | 0.138 | 0.500 | 0.069 | 0.069 | 0.000 | |
| CT | 0.000 | 0.000 | 0.034 | 0.121 | 0.034 | 0.000 | 0.000 | ||
| TT | 0.000 | 0.000 | 0.000 | 0.034 | 0.000 | 0.000 | 0.000 | ||
| IL-10 (− 1082 A/G) ( | GG | 0.023 | 0.000 | 0.047 | 0.047 | 0.023 | 0.023 | 0.000 | |
| GA | 0.000 | 0.000 | 0.000 | 0.163 | 0.000 | 0.047 | 0.000 | ||
| AA | 0.000 | 0.000 | 0.163 | 0.442 | 0.023 | 0.000 | 0.000 | ||
| IL-10 (− 819 C/T) ( | TT | 0.000 | 0.000 | 0.089 | 0.222 | 0.000 | 0.000 | 0.000 | |
| TC | 0.000 | 0.000 | 0.044 | 0.133 | 0.022 | 0.000 | 0.000 | ||
| CC | 0.000 | 0.000 | 0.089 | 0.333 | 0.022 | 0.044 | 0.000 | ||
| NOS3 (rs1799983) ( | GG | 0.011 | 0.000 | 0.096 | 0.447 | 0.021 | 0.053 | 0.000 | |
| GT | 0.011 | 0.000 | 0.074 | 0.223 | 0.043 | 0.021 | 0.000 | ||
| TT | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | ||
| ApoA1 (rs964184) ( | CC | 0.021 | 0.000 | 0.085 | 0.383 | 0.043 | 0.053 | 0.000 | |
| CG | 0.000 | 0.000 | 0.064 | 0.309 | 0.021 | 0.021 | 0.000 | ||
| GG | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | ||
| ApoE (E2E3E4 isoforms) ( | E3E3 | 0.010 | 0.000 | 0.070 | 0.420 | 0.030 | 0.030 | 0.000 | |
| E3E4 | 0.010 | 0.000 | 0.050 | 0.190 | 0.030 | 0.020 | 0.000 | ||
| E2E3 | 0.000 | 0.000 | 0.040 | 0.060 | 0.000 | 0.020 | 0.000 | ||
| E2E4 | 0.000 | 0.000 | 0.000 | 0.010 | 0.000 | 0.000 | 0.000 | ||
| E4E4 | 0.000 | 0.000 | 0.000 | 0.010 | 0.000 | 0.000 | 0.000 | ||
| TGF-β (codon 25) ( | GG | 0.011 | 0.000 | 0.163 | 0.587 | 0.054 | 0.065 | 0.000 | |
| GC | 0.000 | 0.000 | 0.000 | 0.098 | 0.011 | 0.000 | 0.000 | ||
| CC | 0.000 | 0.000 | 0.000 | 0.011 | 0.000 | 0.000 | 0.000 | ||
| TGF-β (codon 10) ( | TT | 0.000 | 0.000 | 0.054 | 0.196 | 0.011 | 0.032 | 0.000 | |
| TC | 0.011 | 0.000 | 0.065 | 0.359 | 0.033 | 0.033 | 0.000 | ||
| CC | |||||||||
Association between genotype frequencies and atherosclerotic lesion severity in carotid artery of autopsied young adults.
| SNP | Genotype | Atherosclerotic lesion in carotid artery (AHA classification) | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Normal | I | II | III | IV | V | VI | |||
| ACE (ins/del intron 16) ( | DD | 0.000 | 0.016 | 0.125 | 0.141 | 0.109 | 0.000 | 0.000 | |
| DI | 0.000 | 0.047 | 0.047 | 0.156 | 0.141 | 0.016 | 0.000 | ||
| II | 0.000 | 0.016 | 0.016 | 0.094 | 0.047 | 0.031 | 0.000 | 0.27 | |
| TNF-α (− 238 G/A) ( | GG | 0.000 | 0.063 | 0.208 | 0.292 | 0.313 | 0.042 | 0.000 | |
| GA | 0.000 | 0.000 | 0.000 | 0.042 | 0.000 | 0.000 | 0.000 | ||
| AA | 0.000 | 0.021 | 0.000 | 0.021 | 0.000 | 0.000 | 0.000 | 0.30 | |
| TNF-α (− 308 G/A) ( | GG | 0.000 | 0.085 | 0.170 | 0.213 | 0.149 | 0.043 | 0.000 | |
| GA | 0.000 | 0.000 | 0.021 | 0.106 | 0.128 | 0.000 | 0.000 | ||
| AA | 0.000 | 0.000 | 0.000 | 0.043 | 0.043 | 0.000 | 0.000 | 0.41 | |
| IFN-γ (+ 874 T/A) ( | AA | 0.000 | 0.083 | 0.067 | 0.217 | 0.150 | 0.033 | 0.000 | |
| AT | 0.000 | 0.000 | 0.083 | 0.150 | 0.100 | 0.000 | 0.000 | ||
| TT | 0.000 | 0.000 | 0.017 | 0.033 | 0.050 | 0.017 | 0.000 | 0.39 | |
| MMP-9 (− 1562 C/T) ( | CC | 0.000 | 0.000 | 0.094 | 0.313 | 0.250 | 0.063 | 0.000 | |
| CT | 0.000 | 0.063 | 0.063 | 0.063 | 0.063 | 0.031 | 0.000 | ||
| TT | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.06 | |
| IL-10 (− 1082 A/G) ( | GG | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | |
| GA | 0.000 | 0.048 | 0.000 | 0.048 | 0.000 | 0.048 | 0.000 | ||
| AA | 0.000 | 0.095 | 0.143 | 0.286 | 0.333 | 0.000 | 0.000 | 0.07 | |
| IL-10 (− 819 C/T) ( | TT | 0.000 | 0.000 | 0.050 | 0.050 | 0.150 | 0.000 | 0.000 | |
| TC | 0.000 | 0.050 | 0.050 | 0.100 | 0.050 | 0.000 | 0.000 | ||
| CC | 0.000 | 0.100 | 0.050 | 0.200 | 0.100 | 0.050 | 0.000 | 0.78 | |
| NOS3 (rs1799983) ( | GG | 0.000 | 0.068 | 0.102 | 0.237 | 0.119 | 0.051 | 0.000 | |
| GT | 0.000 | 0.017 | 0.085 | 0.153 | 0.153 | 0.000 | 0.000 | ||
| TT | 0.000 | 0.000 | 0.000 | 0.017 | 0.000 | 0.000 | 0.000 | 0.62 | |
| ApoA1 (rs964184) ( | CC | 0.017 | 0.050 | 0.117 | 0.250 | 0.167 | 0.033 | 0.000 | |
| CG | 0.000 | 0.033 | 0.050 | 0.133 | 0.133 | 0.017 | 0.000 | ||
| GG | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.93 | |
| ApoE (E2E3E4 isoforms) ( | E3E3 | 0.000 | 0.045 | 0.152 | 0.212 | 0.242 | 0.000 | 0.000 | |
| E3E4 | 0.000 | 0.015 | 0.030 | 0.121 | 0.030 | 0.030 | 0.000 | ||
| E2E3 | 0.015 | 0.000 | 0.000 | 0.030 | 0.015 | 0.015 | 0.000 | ||
| E2E4 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | ||
| E4E4 | 0.000 | 0.015 | 0.000 | 0.030 | 0.000 | 0.000 | 0.000 | 0.12 | |
| TGF-β (codon 25) ( | GG | 0.017 | 0.069 | 0.098 | 0.228 | 0.163 | 0.033 | 0.000 | |
| GC | 0.000 | 0.000 | 0.017 | 0.034 | 0.034 | 0.000 | 0.000 | ||
| CC | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.96 | |
| TGF-β (codon 10) ( | TT | 0.017 | 0.034 | 0.086 | 0.138 | 0.069 | 0.034 | 0.000 | |
| TC | 0.000 | 0.017 | 0.069 | 0.190 | 0.172 | 0.017 | 0.000 | ||
| CC | 0.000 | 0.017 | 0.017 | 0.069 | 0.051 | 0.000 | 0.000 | 0.76 | |
Distributions and frequencies of IL-10 genotypes and haplotypes in all subjects and in anterior descendent coronary artery (DA) and carotid artery (CA) groups.
| Genetic markers | All subjects | DA group | CA group |
|---|---|---|---|
| GCC/GCC | 5 (12) | 5 (13) | 0 (0) |
| GCC/ACC | 8 (19) | 7 (18) | 3 (17) |
| GCC/ATA | 1 (2) | 1 (3) | 0 (0) |
| ACC/ACC | 10 (24) | 7 (18) | 6 (33) |
| ACC/ATA | 8 (19) | 7 (18) | 5 (28) |
| ATA/ATA | 11 (26) | 10 (26) | 4 (22) |
| GCC | 14 (33) | 13 (35) | 3 (17) |
| ACC | 26 (61) | 21 (57) | 14 (78) |
| ATA | 20 (47) | 18 (49) | 9 (50) |
| GCC | 0.221 | 0.243 | 0.083 |
| ACC | 0.326 | 0.378 | 0.556 |
| ATA | 0.360 | 0.378 | 0.361 |