Literature DB >> 26672747

Genetics, Morphology, Advertisement Calls, and Historical Records Distinguish Six New Polyploid Species of African Clawed Frog (Xenopus, Pipidae) from West and Central Africa.

Ben J Evans1, Timothy F Carter2, Eli Greenbaum3, Václav Gvoždík4,5, Darcy B Kelley6, Patrick J McLaughlin7, Olivier S G Pauwels8, Daniel M Portik9, Edward L Stanley10, Richard C Tinsley11, Martha L Tobias5, David C Blackburn10.   

Abstract

African clawed frogs, genus Xenopus, are extraordinary among vertebrates in the diversity of their polyploid species and the high number of independent polyploidization events that occurred during their diversification. Here we update current understanding of the evolutionary history of this group and describe six new species from west and central sub-Saharan Africa, including four tetraploids and two dodecaploids. We provide information on molecular variation, morphology, karyotypes, vocalizations, and estimated geographic ranges, which support the distinctiveness of these new species. We resurrect Xenopus calcaratus from synonymy of Xenopus tropicalis and refer populations from Bioko Island and coastal Cameroon (near Mt. Cameroon) to this species. To facilitate comparisons to the new species, we also provide comments on the type specimens, morphology, and distributions of X. epitropicalis, X. tropicalis, and X. fraseri. This includes significantly restricted application of the names X. fraseri and X. epitropicalis, the first of which we argue is known definitively only from type specimens and possibly one other specimen. Inferring the evolutionary histories of these new species allows refinement of species groups within Xenopus and leads to our recognition of two subgenera (Xenopus and Silurana) and three species groups within the subgenus Xenopus (amieti, laevis, and muelleri species groups).

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Year:  2015        PMID: 26672747      PMCID: PMC4682732          DOI: 10.1371/journal.pone.0142823

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  45 in total

1.  Evolution of the closely related, sex-related genes DM-W and DMRT1 in African clawed frogs (Xenopus).

Authors:  Adam J Bewick; Dave W Anderson; Ben J Evans
Journal:  Evolution       Date:  2010-11-02       Impact factor: 3.694

2.  Host-defense peptides in skin secretions of the tetraploid frog Silurana epitropicalis with potent activity against methicillin-resistant Staphylococcus aureus (MRSA).

Authors:  J Michael Conlon; Milena Mechkarska; Manju Prajeep; Agnes Sonnevend; Laurent Coquet; Jérôme Leprince; Thierry Jouenne; Hubert Vaudry; Jay D King
Journal:  Peptides       Date:  2012-07-16       Impact factor: 3.750

3.  Peptidomic analysis of skin secretions demonstrates that the allopatric populations of Xenopus muelleri (Pipidae) are not conspecific.

Authors:  Milena Mechkarska; Eman Ahmed; Laurent Coquet; Jérôme Leprince; Thierry Jouenne; Hubert Vaudry; Jay D King; J Michael Conlon
Journal:  Peptides       Date:  2011-06-01       Impact factor: 3.750

Review 4.  Xenopus research: metamorphosed by genetics and genomics.

Authors:  Richard M Harland; Robert M Grainger
Journal:  Trends Genet       Date:  2011-10-01       Impact factor: 11.639

5.  Host-defense peptides from skin secretions of Fraser's clawed frog Xenopus fraseri (Pipidae): Further insight into the evolutionary history of the Xenopodinae.

Authors:  J Michael Conlon; Milena Mechkarska; Jolanta Kolodziejek; Norbert Nowotny; Laurent Coquet; Jérôme Leprince; Thierry Jouenne; Hubert Vaudry
Journal:  Comp Biochem Physiol Part D Genomics Proteomics       Date:  2014-10-13       Impact factor: 2.674

6.  A mitochondrial DNA phylogeny of African clawed frogs: phylogeography and implications for polyploid evolution.

Authors:  Ben J Evans; Darcy B Kelley; Richard C Tinsley; Don J Melnick; David C Cannatella
Journal:  Mol Phylogenet Evol       Date:  2004-10       Impact factor: 4.286

7.  Population-specific incidence of testicular ovarian follicles in Xenopus laevis from South Africa: a potential issue in endocrine testing.

Authors:  Louis H Du Preez; Nisile Kunene; Robert Hanner; John P Giesy; Keith R Solomon; Alan Hosmer; Glen J Van Der Kraak
Journal:  Aquat Toxicol       Date:  2009-08-03       Impact factor: 4.964

8.  Albumin evolution in polyploid species of the genus Xenopus.

Authors:  J D Graf; M Fischberg
Journal:  Biochem Genet       Date:  1986-12       Impact factor: 1.890

9.  Heterogeneous interspecific interactions in a host-parasite system.

Authors:  J A Jackson; R J Pleass; J Cable; J E Bradley; R C Tinsley
Journal:  Int J Parasitol       Date:  2006-08-08       Impact factor: 3.981

10.  Targeted enrichment: maximizing orthologous gene comparisons across deep evolutionary time.

Authors:  Shannon M Hedtke; Matthew J Morgan; David C Cannatella; David M Hillis
Journal:  PLoS One       Date:  2013-07-02       Impact factor: 3.240

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  27 in total

Review 1.  Hybridization in human evolution: Insights from other organisms.

Authors:  Rebecca R Ackermann; Michael L Arnold; Marcella D Baiz; James A Cahill; Liliana Cortés-Ortiz; Ben J Evans; B Rosemary Grant; Peter R Grant; Benedikt Hallgrimsson; Robyn A Humphreys; Clifford J Jolly; Joanna Malukiewicz; Christopher J Percival; Terrence B Ritzman; Christian Roos; Charles C Roseman; Lauren Schroeder; Fred H Smith; Kerryn A Warren; Robert K Wayne; Dietmar Zinner
Journal:  Evol Anthropol       Date:  2019-06-20

Review 2.  Probing forebrain to hindbrain circuit functions in Xenopus.

Authors:  Darcy B Kelley; Taffeta M Elliott; Ben J Evans; Ian C Hall; Elizabeth C Leininger; Heather J Rhodes; Ayako Yamaguchi; Erik Zornik
Journal:  Genesis       Date:  2017-01       Impact factor: 2.487

Review 3.  Generation, Coordination, and Evolution of Neural Circuits for Vocal Communication.

Authors:  Darcy B Kelley; Irene H Ballagh; Charlotte L Barkan; Andres Bendesky; Taffeta M Elliott; Ben J Evans; Ian C Hall; Young Mi Kwon; Ursula Kwong-Brown; Elizabeth C Leininger; Emilie C Perez; Heather J Rhodes; Avelyne Villain; Ayako Yamaguchi; Erik Zornik
Journal:  J Neurosci       Date:  2020-01-02       Impact factor: 6.167

4.  Rhythm generation, coordination, and initiation in the vocal pathways of male African clawed frogs.

Authors:  Ayako Yamaguchi; Jessica Cavin Barnes; Todd Appleby
Journal:  J Neurophysiol       Date:  2016-10-19       Impact factor: 2.714

5.  An extracellular acidic cleft confers profound H+-sensitivity to epithelial sodium channels containing the δ-subunit in Xenopus laevis.

Authors:  Lukas Wichmann; Jasdip Singh Dulai; Jon Marles-Wright; Stephan Maxeiner; Pawel Piotr Szczesniak; Ivan Manzini; Mike Althaus
Journal:  J Biol Chem       Date:  2019-06-27       Impact factor: 5.157

6.  Genetic, Epigenetic, and Post-Transcriptional Basis of Divergent Tissue Regenerative Capacities Among Vertebrates.

Authors:  Sheamin Khyeam; Sukjun Lee; Guo N Huang
Journal:  Adv Genet (Hoboken)       Date:  2021-06

7.  Neofunctionalization of a Noncoding Portion of a DNA Transposon in the Coding Region of the Chimerical Sex-Determining Gene dm-W in Xenopus Frogs.

Authors:  Shun Hayashi; Kosuke Suda; Fuga Fujimura; Makoto Fujikawa; Kei Tamura; Daisuke Tsukamoto; Ben J Evans; Nobuhiko Takamatsu; Michihiko Ito
Journal:  Mol Biol Evol       Date:  2022-07-02       Impact factor: 8.800

Review 8.  Evolution of innate-like T cells and their selection by MHC class I-like molecules.

Authors:  Eva-Stina Edholm; Maureen Banach; Jacques Robert
Journal:  Immunogenetics       Date:  2016-07-01       Impact factor: 2.846

9.  Tectonics, climate and the diversification of the tropical African terrestrial flora and fauna.

Authors:  Thomas L P Couvreur; Pierre Sepulchre; Gilles Dauby; Anne Blach-Overgaard; Vincent Deblauwe; Steven Dessein; Vincent Droissart; Oliver J Hardy; David J Harris; Steven B Janssens; Alexandra C Ley; Barbara A Mackinder; Bonaventure Sonké; Marc S M Sosef; Tariq Stévart; Jens-Christian Svenning; Jan J Wieringa; Adama Faye; Alain D Missoup; Krystal A Tolley; Violaine Nicolas; Stéphan Ntie; Frédiéric Fluteau; Cécile Robin; Francois Guillocheau; Doris Barboni
Journal:  Biol Rev Camb Philos Soc       Date:  2020-09-13

10.  Molecular phylogeny of Panaspis and Afroablepharus skinks (Squamata: Scincidae) in the savannas of sub-Saharan Africa.

Authors:  Maria F Medina; Aaron M Bauer; William R Branch; Andreas Schmitz; Werner Conradie; Zoltán T Nagy; Toby J Hibbitts; Raffael Ernst; Daniel M Portik; Stuart V Nielsen; Timothy J Colston; Chifundera Kusamba; Mathias Behangana; Mark-Oliver Rödel; Eli Greenbaum
Journal:  Mol Phylogenet Evol       Date:  2016-04-23       Impact factor: 4.286

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