Literature DB >> 26669319

Abscisic-acid-dependent basic leucine zipper (bZIP) transcription factors in plant abiotic stress.

Aditya Banerjee1, Aryadeep Roychoudhury2.   

Abstract

One of the major causes of significant crop loss throughout the world is the myriad of environmental stresses including drought, salinity, cold, heavy metal toxicity, and ultraviolet-B (UV-B) rays. Plants as sessile organisms have evolved various effective mechanism which enable them to withstand this plethora of stresses. Most of such regulatory mechanisms usually follow the abscisic-acid (ABA)-dependent pathway. In this review, we have primarily focussed on the basic leucine zipper (bZIP) transcription factors (TFs) activated by the ABA-mediated signalosome. Upon perception of ABA by specialized receptors, the signal is transduced via various groups of Ser/Thr kinases, which phosphorylate the bZIP TFs. Following such post-translational modification of TFs, they are activated so that they bind to specific cis-acting sequences called abscisic-acid-responsive elements (ABREs) or GC-rich coupling elements (CE), thereby influencing the expression of their target downstream genes. Several in silico techniques have been adopted so far to predict the structural features, recognize the regulatory modification sites, undergo phylogenetic analyses, and facilitate genome-wide survey of TF under multiple stresses. Current investigations on the epigenetic regulation that controls greater accessibility of the inducible regions of DNA of the target gene to the bZIP TFs exclusively under stress situations, along with the evolved stress memory responses via genomic imprinting mechanism, have been highlighted. The potentiality of overexpression of bZIP TFs, either in a homologous or in a heterologous background, in generating transgenic plants tolerant to various abiotic stressors have also been addressed by various groups. The present review will provide a coherent documentation on the functional characterization and regulation of bZIP TFs under multiple environmental stresses, with the major goal of generating multiple-stress-tolerant plant cultivars in near future.

Entities:  

Keywords:  Abscisic-acid; Basic leucine zipper; Epigenetics; In silico analyses; Transcription factors; Transgenic plants

Mesh:

Substances:

Year:  2015        PMID: 26669319     DOI: 10.1007/s00709-015-0920-4

Source DB:  PubMed          Journal:  Protoplasma        ISSN: 0033-183X            Impact factor:   3.356


  95 in total

1.  Sequence and structure-based prediction of eukaryotic protein phosphorylation sites.

Authors:  N Blom; S Gammeltoft; S Brunak
Journal:  J Mol Biol       Date:  1999-12-17       Impact factor: 5.469

2.  JASPAR: an open-access database for eukaryotic transcription factor binding profiles.

Authors:  Albin Sandelin; Wynand Alkema; Pär Engström; Wyeth W Wasserman; Boris Lenhard
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

Review 3.  The role of WRKY transcription factors in plant abiotic stresses.

Authors:  Ligang Chen; Yu Song; Shujia Li; Liping Zhang; Changsong Zou; Diqiu Yu
Journal:  Biochim Biophys Acta       Date:  2011-09-20

4.  Protein structure prediction on the Web: a case study using the Phyre server.

Authors:  Lawrence A Kelley; Michael J E Sternberg
Journal:  Nat Protoc       Date:  2009       Impact factor: 13.491

Review 5.  Roles of melatonin in abiotic stress resistance in plants.

Authors:  Na Zhang; Qianqian Sun; Haijun Zhang; Yunyun Cao; Sarah Weeda; Shuxin Ren; Yang-Dong Guo
Journal:  J Exp Bot       Date:  2014-08-14       Impact factor: 6.992

6.  The Mg-chelatase H subunit of Arabidopsis antagonizes a group of WRKY transcription repressors to relieve ABA-responsive genes of inhibition.

Authors:  Yi Shang; Lu Yan; Zhi-Qiang Liu; Zheng Cao; Chao Mei; Qi Xin; Fu-Qing Wu; Xiao-Fang Wang; Shu-Yuan Du; Tao Jiang; Xiao-Feng Zhang; Rui Zhao; Hai-Li Sun; Rui Liu; Yong-Tao Yu; Da-Peng Zhang
Journal:  Plant Cell       Date:  2010-06-11       Impact factor: 11.277

7.  The Arabidopsis NAC transcription factor ANAC096 cooperates with bZIP-type transcription factors in dehydration and osmotic stress responses.

Authors:  Zheng-Yi Xu; Soo Youn Kim; Do Young Hyeon; Dae Heon Kim; Ting Dong; Youngmin Park; Jing Bo Jin; Se-Hwan Joo; Seong-Ki Kim; Jong Chan Hong; Daehee Hwang; Inhwan Hwang
Journal:  Plant Cell       Date:  2013-11-27       Impact factor: 11.277

8.  Arabidopsis NF-YB subunits LEC1 and LEC1-LIKE activate transcription by interacting with seed-specific ABRE-binding factors.

Authors:  Akiko Yamamoto; Yasuaki Kagaya; Ryoko Toyoshima; Michiko Kagaya; Shin Takeda; Tsukaho Hattori
Journal:  Plant J       Date:  2009-02-03       Impact factor: 6.417

9.  A rice bZIP protein, designated OSBZ8, is rapidly induced by abscisic acid.

Authors:  H Nakagawa; K Ohmiya; T Hattori
Journal:  Plant J       Date:  1996-02       Impact factor: 6.417

10.  A web-based bioinformatics interface applied to the GENOSOJA Project: Databases and pipelines.

Authors:  Leandro Costa do Nascimento; Gustavo Gilson Lacerda Costa; Eliseu Binneck; Gonçalo Amarante Guimarães Pereira; Marcelo Falsarella Carazzolle
Journal:  Genet Mol Biol       Date:  2012-06       Impact factor: 1.771

View more
  51 in total

1.  Structural introspection of a putative fluoride transporter in plants.

Authors:  Aditya Banerjee; Aryadeep Roychoudhury
Journal:  3 Biotech       Date:  2019-02-22       Impact factor: 2.406

2.  Abscisic Acid Induces Resistance against Bamboo Mosaic Virus through Argonaute2 and 3.

Authors:  Mazen Alazem; Meng-Hsun He; Peter Moffett; Na-Sheng Lin
Journal:  Plant Physiol       Date:  2017-03-07       Impact factor: 8.340

3.  A subclass of HSP70s regulate development and abiotic stress responses in Arabidopsis thaliana.

Authors:  Linna Leng; Qianqian Liang; Jianjun Jiang; Chi Zhang; Yuhan Hao; Xuelu Wang; Wei Su
Journal:  J Plant Res       Date:  2016-12-22       Impact factor: 2.629

4.  Spermidine application reduces fluoride uptake and ameliorates physiological injuries in a susceptible rice cultivar by activating diverse regulators of the defense machinery.

Authors:  Aditya Banerjee; Ankur Singh; Aryadeep Roychoudhury
Journal:  Environ Sci Pollut Res Int       Date:  2019-11-16       Impact factor: 4.223

5.  Understanding the regulatory relationship of abscisic acid and bZIP transcription factors towards amylose biosynthesis in wheat.

Authors:  Pankaj Kumar; Afsana Parveen; Himanshu Sharma; Mohammed Saba Rahim; Ankita Mishra; Prashant Kumar; Koushik Shah; Vikas Rishi; Joy Roy
Journal:  Mol Biol Rep       Date:  2021-04-08       Impact factor: 2.316

Review 6.  The gymnastics of epigenomics in rice.

Authors:  Aditya Banerjee; Aryadeep Roychoudhury
Journal:  Plant Cell Rep       Date:  2017-09-02       Impact factor: 4.570

7.  Genome-wide analysis and expression profiling of PP2C clade D under saline and alkali stresses in wild soybean and Arabidopsis.

Authors:  Chao Chen; Yang Yu; Xiaodong Ding; Beidong Liu; Huizi Duanmu; Dan Zhu; Xiaoli Sun; Lei Cao; Qiang Li; Yanming Zhu
Journal:  Protoplasma       Date:  2017-10-19       Impact factor: 3.356

8.  A new Em-like protein from Lactuca sativa, LsEm1, enhances drought and salt stress tolerance in Escherichia coli and rice.

Authors:  Dian-Jun Xiang; Li-Li Man; Chun-Lan Zhang; Zhi-Gang Li; Gen-Chang Zheng
Journal:  Protoplasma       Date:  2018-02-07       Impact factor: 3.356

9.  Characterization and analysis of the transcriptome response to drought in Larix kaempferi using PacBio full-length cDNA sequencing integrated with de novo RNA-seq reads.

Authors:  Wenlong Li; Joobin Lee; Sen Yu; Fude Wang; Wanqiu Lv; Xin Zhang; Chenghao Li; Jingli Yang
Journal:  Planta       Date:  2021-01-09       Impact factor: 4.116

10.  Genomic regions associated with heat stress tolerance in tropical maize (Zea mays L.).

Authors:  Kaliyamoorthy Seetharam; Prakash H Kuchanur; K B Koirala; Mahendra Prasad Tripathi; Ayyanagouda Patil; Viswanadh Sudarsanam; Reshmi Rani Das; Ramesh Chaurasia; Kamal Pandey; Hindu Vemuri; Madhumal Thayil Vinayan; Sudha K Nair; Raman Babu; P H Zaidi
Journal:  Sci Rep       Date:  2021-07-02       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.