Literature DB >> 26667791

Integrating electronic health record genotype and phenotype datasets to transform patient care.

D M Roden1,2,3, J C Denny1,2.   

Abstract

The Health Information Technology for Economic and Clinical Health (HITECH) Act of 2009 mandates the development and implementation of electronic health record (EHR) systems across the country. While a primary goal is to improve the care of individual patients, EHRs are also key enabling resources for a vision of individualized (or personalized or precision) medicine: the aggregation of multiple EHRs within or across healthcare systems should allow discovery of patient subsets that have unusual and definable clinical trajectories that deviate importantly from the expected response in a "typical" patient. The spectrum of such personalized care can then extend from prevention to choice of medication to intensity or nature of follow-up.
© 2015 American Society for Clinical Pharmacology and Therapeutics.

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Mesh:

Year:  2016        PMID: 26667791      PMCID: PMC4760864          DOI: 10.1002/cpt.321

Source DB:  PubMed          Journal:  Clin Pharmacol Ther        ISSN: 0009-9236            Impact factor:   6.875


  67 in total

1.  Opportunities and challenges for the NIH--an interview with Francis Collins. Interview by Robert Steinbrook.

Authors:  Francis Collins
Journal:  N Engl J Med       Date:  2009-09-16       Impact factor: 91.245

2.  Genetic risk factors for major bleeding in patients treated with warfarin in a community setting.

Authors:  J A Roth; D Boudreau; M M Fujii; F M Farin; A E Rettie; K E Thummel; D L Veenstra
Journal:  Clin Pharmacol Ther       Date:  2014-02-06       Impact factor: 6.875

3.  A pharmacogenetic versus a clinical algorithm for warfarin dosing.

Authors:  Stephen E Kimmel; Benjamin French; Scott E Kasner; Julie A Johnson; Jeffrey L Anderson; Brian F Gage; Yves D Rosenberg; Charles S Eby; Rosemary A Madigan; Robert B McBane; Sherif Z Abdel-Rahman; Scott M Stevens; Steven Yale; Emile R Mohler; Margaret C Fang; Vinay Shah; Richard B Horenstein; Nita A Limdi; James A S Muldowney; Jaspal Gujral; Patrice Delafontaine; Robert J Desnick; Thomas L Ortel; Henny H Billett; Robert C Pendleton; Nancy L Geller; Jonathan L Halperin; Samuel Z Goldhaber; Michael D Caldwell; Robert M Califf; Jonas H Ellenberg
Journal:  N Engl J Med       Date:  2013-11-19       Impact factor: 91.245

4.  Characterization of statin dose response in electronic medical records.

Authors:  W-Q Wei; Q Feng; L Jiang; M S Waitara; O F Iwuchukwu; D M Roden; M Jiang; H Xu; R M Krauss; J I Rotter; D A Nickerson; R L Davis; R L Berg; P L Peissig; C A McCarty; R A Wilke; J C Denny
Journal:  Clin Pharmacol Ther       Date:  2013-10-04       Impact factor: 6.875

5.  PheWAS: demonstrating the feasibility of a phenome-wide scan to discover gene-disease associations.

Authors:  Joshua C Denny; Marylyn D Ritchie; Melissa A Basford; Jill M Pulley; Lisa Bastarache; Kristin Brown-Gentry; Deede Wang; Dan R Masys; Dan M Roden; Dana C Crawford
Journal:  Bioinformatics       Date:  2010-03-24       Impact factor: 6.937

6.  Biobanks and electronic medical records: enabling cost-effective research.

Authors:  Erica Bowton; Julie R Field; Sunny Wang; Jonathan S Schildcrout; Sara L Van Driest; Jessica T Delaney; James Cowan; Peter Weeke; Jonathan D Mosley; Quinn S Wells; Jason H Karnes; Christian Shaffer; Josh F Peterson; Joshua C Denny; Dan M Roden; Jill M Pulley
Journal:  Sci Transl Med       Date:  2014-04-30       Impact factor: 17.956

7.  Extracting research-quality phenotypes from electronic health records to support precision medicine.

Authors:  Wei-Qi Wei; Joshua C Denny
Journal:  Genome Med       Date:  2015-04-30       Impact factor: 11.117

8.  Clinically actionable genotypes among 10,000 patients with preemptive pharmacogenomic testing.

Authors:  S L Van Driest; Y Shi; E A Bowton; J S Schildcrout; J F Peterson; J Pulley; J C Denny; D M Roden
Journal:  Clin Pharmacol Ther       Date:  2013-11-19       Impact factor: 6.875

9.  A polymorphism in HLA-G modifies statin benefit in asthma.

Authors:  D Naidoo; A C Wu; M H Brilliant; J Denny; C Ingram; T E Kitchner; J G Linneman; M J McGeachie; D M Roden; C M Shaffer; A Shah; P Weeke; S T Weiss; H Xu; M W Medina
Journal:  Pharmacogenomics J       Date:  2014-09-30       Impact factor: 3.550

10.  Inactivating mutations in NPC1L1 and protection from coronary heart disease.

Authors:  Nathan O Stitziel; Hong-Hee Won; Alanna C Morrison; Gina M Peloso; Ron Do; Leslie A Lange; Pierre Fontanillas; Namrata Gupta; Stefano Duga; Anuj Goel; Martin Farrall; Danish Saleheen; Paola Ferrario; Inke König; Rosanna Asselta; Piera A Merlini; Nicola Marziliano; Maria Francesca Notarangelo; Ursula Schick; Paul Auer; Themistocles L Assimes; Muredach Reilly; Robert Wilensky; Daniel J Rader; G Kees Hovingh; Thomas Meitinger; Thorsten Kessler; Adnan Kastrati; Karl-Ludwig Laugwitz; David Siscovick; Jerome I Rotter; Stanely L Hazen; Russell Tracy; Sharon Cresci; John Spertus; Rebecca Jackson; Stephen M Schwartz; Pradeep Natarajan; Jacy Crosby; Donna Muzny; Christie Ballantyne; Stephen S Rich; Christopher J O'Donnell; Goncalo Abecasis; Shamil Sunaev; Deborah A Nickerson; Julie E Buring; Paul M Ridker; Daniel I Chasman; Erin Austin; Iftikhar J Kullo; Peter E Weeke; Christian M Shaffer; Lisa A Bastarache; Joshua C Denny; Dan M Roden; Colin Palmer; Panos Deloukas; Dan-Yu Lin; Zheng-zheng Tang; Jeanette Erdmann; Heribert Schunkert; John Danesh; Jaume Marrugat; Roberto Elosua; Diego Ardissino; Ruth McPherson; Hugh Watkins; Alex P Reiner; James G Wilson; David Altshuler; Richard A Gibbs; Eric S Lander; Eric Boerwinkle; Stacey Gabriel; Sekar Kathiresan
Journal:  N Engl J Med       Date:  2014-11-12       Impact factor: 91.245

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  13 in total

Review 1.  Pharmacogenetics of alcohol use disorder treatments: an update.

Authors:  Emily E Hartwell; Henry R Kranzler
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2.  Cognitive analysis of metabolomics data for systems biology.

Authors:  Erica L-W Majumder; Elizabeth M Billings; H Paul Benton; Richard L Martin; Amelia Palermo; Carlos Guijas; Markus M Rinschen; Xavier Domingo-Almenara; J Rafael Montenegro-Burke; Bradley A Tagtow; Robert S Plumb; Gary Siuzdak
Journal:  Nat Protoc       Date:  2021-01-22       Impact factor: 13.491

3.  Ethics and Epistemology in Big Data Research.

Authors:  Wendy Lipworth; Paul H Mason; Ian Kerridge; John P A Ioannidis
Journal:  J Bioeth Inq       Date:  2017-03-20       Impact factor: 1.352

4.  PRECISION MEDICINE: DATA AND DISCOVERY FOR IMPROVED HEALTH AND THERAPY.

Authors:  Alexander A Morgan; Dana C Crawford; Josh C Denny; Sean D Mooney; Bruce J Aronow; Steven E Brenner
Journal:  Pac Symp Biocomput       Date:  2017

Review 5.  The genetic epidemiology of substance use disorder: A review.

Authors:  Elizabeth C Prom-Wormley; Jane Ebejer; Danielle M Dick; M Scott Bowers
Journal:  Drug Alcohol Depend       Date:  2017-08-01       Impact factor: 4.492

Review 6.  The use of electronic health records for psychiatric phenotyping and genomics.

Authors:  Jordan W Smoller
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2017-05-30       Impact factor: 3.568

Review 7.  Phenome-wide association studies: a new method for functional genomics in humans.

Authors:  Dan M Roden
Journal:  J Physiol       Date:  2017-03-26       Impact factor: 5.182

Review 8.  Methods for Stratification and Validation Cohorts: A Scoping Review.

Authors:  Teresa Torres Moral; Albert Sanchez-Niubo; Anna Monistrol-Mula; Chiara Gerardi; Rita Banzi; Paula Garcia; Jacques Demotes-Mainard; Josep Maria Haro
Journal:  J Pers Med       Date:  2022-04-26

9.  Preferences for Accessing Electronic Health Records for Research Purposes: Views of Parents Who Have a Child With a Known or Suspected Genetic Condition.

Authors:  Melissa Raspa; Ryan S Paquin; Derek S Brown; Sara Andrews; Anne Edwards; Rebecca Moultrie; Laura Wagner; MaryKate Frisch; Lauren Turner-Brown; Anne C Wheeler
Journal:  Value Health       Date:  2020-10-26       Impact factor: 5.725

10.  Use of big data in drug development for precision medicine: an update.

Authors:  Tongqi Qian; Shijia Zhu; Yujin Hoshida
Journal:  Expert Rev Precis Med Drug Dev       Date:  2019-05-20
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