Literature DB >> 26657593

Total integrated slidable and valveless solid phase extraction-polymerase chain reaction-capillary electrophoresis microdevice for mini Y chromosome short tandem repeat genotyping.

Yong Tae Kim1, Dohwan Lee1, Hyun Young Heo1, Jeong Eun Sim2, Kwang Man Woo2, Do Hyun Kim1, Sung Gap Im1, Tae Seok Seo3.   

Abstract

A fully integrated slidable and valveless microsystem, which performs solid phase DNA extraction (SPE), micro-polymerase chain reaction (μPCR) and micro-capillary electrophoresis (μCE) coupled with a portable genetic analyser, has been developed for forensic genotyping. The use of a slidable chip, in which a 1 μL-volume of the PCR chamber was patterned at the center, does not necessitate any microvalves and tubing systems for fluidic control. The functional micro-units of SPE, μPCR, and μCE were fabricated on a single glass wafer by conventional photolithography, and the integrated microdevice consists of three layers: from top to bottom, a slidable chip, a channel wafer in which a SPE chamber, a mixing microchannel, and a CE microchannel were fabricated, and a Ti/Pt resistance temperature detector (RTD) wafer. The channel glass wafer and the RTD glass wafer were thermally bonded, and the slidable chip was placed on the designated functional unit. The entire process from the DNA extraction using whole human blood sample to identification of target Y chromosomal short tandem repeat (STR) loci was serially carried out with simply sliding the slidable chamber from one to another functional unit. Monoplex and multiplex detection of amelogenin and mini Y STR loci were successfully analysed on the integrated slidable SPE-μPCR-μCE microdevice by using 1 μL whole human blood within 60 min. The proposed advanced genetic analysis microsystem is capable of point-of-care DNA testing with sample-in-answer-out capability, more importantly, without use of complicated microvalves and microtubing systems for liquid transfer.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Capillary electrophoresis; Integrated microdevice; Mini Y STR typing; Polymerase chain reaction; Solid phase DNA extraction

Mesh:

Substances:

Year:  2015        PMID: 26657593     DOI: 10.1016/j.bios.2015.11.079

Source DB:  PubMed          Journal:  Biosens Bioelectron        ISSN: 0956-5663            Impact factor:   10.618


  3 in total

1.  A Lab-on-a-Chip Device Integrated DNA Extraction and Solid Phase PCR Array for the Genotyping of High-Risk HPV in Clinical Samples.

Authors:  Cancan Zhu; Anzhong Hu; Junsheng Cui; Ke Yang; Xinchao Zhu; Yong Liu; Guoqing Deng; Ling Zhu
Journal:  Micromachines (Basel)       Date:  2019-08-15       Impact factor: 2.891

2.  Evaluation of simple sequence repeats (SSR) and single nucleotide polymorphism (SNP)-based methods in olive varieties from the Northwest of Spain and potential for miniaturization.

Authors:  Joana Carvalho; Shambhavi Yadav; Alejandro Garrido-Maestu; Sarah Azinheiro; Isabel Trujillo; Jorge Barros-Velázquez; Marta Prado
Journal:  Food Chem (Oxf)       Date:  2021-08-04

3.  Partitioning of hydrogels in 3D-printed microchannels.

Authors:  Yong Tae Kim; Sara Bohjanen; Nirveek Bhattacharjee; Albert Folch
Journal:  Lab Chip       Date:  2019-09-10       Impact factor: 6.799

  3 in total

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