Literature DB >> 26656687

Crystal Structure of Marburg Virus VP40 Reveals a Broad, Basic Patch for Matrix Assembly and a Requirement of the N-Terminal Domain for Immunosuppression.

Shun-Ichiro Oda1, Takeshi Noda2, Kaveesha J Wijesinghe3, Peter Halfmann4, Zachary A Bornholdt1, Dafna M Abelson1, Tammy Armbrust4, Robert V Stahelin5, Yoshihiro Kawaoka6, Erica Ollmann Saphire7.   

Abstract

UNLABELLED: Marburg virus (MARV), a member of the filovirus family, causes severe hemorrhagic fever with up to 90% lethality. MARV matrix protein VP40 is essential for assembly and release of newly copied viruses and also suppresses immune signaling in the infected cell. Here we report the crystal structure of MARV VP40. We found that MARV VP40 forms a dimer in solution, mediated by N-terminal domains, and that formation of this dimer is essential for budding of virus-like particles. We also found the N-terminal domain to be necessary and sufficient for immune antagonism. The C-terminal domains of MARV VP40 are dispensable for immunosuppression but are required for virus assembly. The C-terminal domains are only 16% identical to those of Ebola virus, differ in structure from those of Ebola virus, and form a distinct broad and flat cationic surface that likely interacts with the cell membrane during virus assembly. IMPORTANCE: Marburg virus, a cousin of Ebola virus, causes severe hemorrhagic fever, with up to 90% lethality seen in recent outbreaks. Molecular structures and visual images of the proteins of Marburg virus are essential for the development of antiviral drugs. One key protein in the Marburg virus life cycle is VP40, which both assembles the virus and suppresses the immune system. Here we provide the molecular structure of Marburg virus VP40, illustrate differences from VP40 of Ebola virus, and reveal surfaces by which Marburg VP40 assembles progeny and suppresses immune function.
Copyright © 2016, American Society for Microbiology. All Rights Reserved.

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Year:  2015        PMID: 26656687      PMCID: PMC4733994          DOI: 10.1128/JVI.01597-15

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  39 in total

1.  VP40, the matrix protein of Marburg virus, is associated with membranes of the late endosomal compartment.

Authors:  Larissa Kolesnikova; Harald Bugany; Hans-Dieter Klenk; Stephan Becker
Journal:  J Virol       Date:  2002-02       Impact factor: 5.103

2.  Electrostatics of nanosystems: application to microtubules and the ribosome.

Authors:  N A Baker; D Sept; S Joseph; M J Holst; J A McCammon
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-21       Impact factor: 11.205

3.  Ebola virus VP40-induced particle formation and association with the lipid bilayer.

Authors:  L D Jasenosky; G Neumann; I Lukashevich; Y Kawaoka
Journal:  J Virol       Date:  2001-06       Impact factor: 5.103

4.  T-Coffee: A novel method for fast and accurate multiple sequence alignment.

Authors:  C Notredame; D G Higgins; J Heringa
Journal:  J Mol Biol       Date:  2000-09-08       Impact factor: 5.469

5.  Substructure solution with SHELXD.

Authors:  Thomas R Schneider; George M Sheldrick
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-09-28

6.  ESPript/ENDscript: Extracting and rendering sequence and 3D information from atomic structures of proteins.

Authors:  Patrice Gouet; Xavier Robert; Emmanuel Courcelle
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

7.  Oligomerization and polymerization of the filovirus matrix protein VP40.

Authors:  Joanna Timmins; Guy Schoehn; Christine Kohlhaas; Hans-Dieter Klenk; Rob W H Ruigrok; Winfríed Weissenhorn
Journal:  Virology       Date:  2003-08-01       Impact factor: 3.616

8.  NEGATIVE STAINING OF PHOSPHOLIPIDS AND THEIR STRUCTURAL MODIFICATION BY SURFACE-ACTIVE AGENTS AS OBSERVED IN THE ELECTRON MICROSCOPE.

Authors:  A D BANGHAM; R W HORNE
Journal:  J Mol Biol       Date:  1964-05       Impact factor: 5.469

9.  Maximum-likelihood density modification.

Authors:  T C Terwilliger
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2000-08

10.  The matrix protein VP40 from Ebola virus octamerizes into pore-like structures with specific RNA binding properties.

Authors:  F Xavier Gomis-Rüth; Andréa Dessen; Joanna Timmins; Andreas Bracher; Larissa Kolesnikowa; Stephan Becker; Hans Dieter Klenk; Winfried Weissenhorn
Journal:  Structure       Date:  2003-04       Impact factor: 5.006

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  18 in total

1.  Investigation of the Lipid Binding Properties of the Marburg Virus Matrix Protein VP40.

Authors:  Kaveesha J Wijesinghe; Robert V Stahelin
Journal:  J Virol       Date:  2015-12-30       Impact factor: 5.103

Review 2.  Rodent-Adapted Filoviruses and the Molecular Basis of Pathogenesis.

Authors:  Logan Banadyga; Michael A Dolan; Hideki Ebihara
Journal:  J Mol Biol       Date:  2016-05-14       Impact factor: 5.469

Review 3.  Oligomeric viral proteins: small in size, large in presence.

Authors:  Bhargavi Jayaraman; Amber M Smith; Jason D Fernandes; Alan D Frankel
Journal:  Crit Rev Biochem Mol Biol       Date:  2016-08-14       Impact factor: 8.250

4.  A cationic, C-terminal patch and structural rearrangements in Ebola virus matrix VP40 protein control its interactions with phosphatidylserine.

Authors:  Kathryn Del Vecchio; Cary T Frick; Jeevan B Gc; Shun-Ichiro Oda; Bernard S Gerstman; Erica Ollmann Saphire; Prem P Chapagain; Robert V Stahelin
Journal:  J Biol Chem       Date:  2018-01-18       Impact factor: 5.157

5.  Compound FC-10696 Inhibits Egress of Marburg Virus.

Authors:  Ziying Han; Hong Ye; Jingjing Liang; Ariel Shepley-McTaggart; Jay E Wrobel; Allen B Reitz; Alison Whigham; Katrina N Kavelish; Michael S Saporito; Bruce D Freedman; Olena Shtanko; Ronald N Harty
Journal:  Antimicrob Agents Chemother       Date:  2021-06-17       Impact factor: 5.191

6.  Lipid-specific oligomerization of the Marburg virus matrix protein VP40 is regulated by two distinct interfaces for virion assembly.

Authors:  Souad Amiar; Monica L Husby; Kaveesha J Wijesinghe; Stephanie Angel; Nisha Bhattarai; Bernard S Gerstman; Prem P Chapagain; Sheng Li; Robert V Stahelin
Journal:  J Biol Chem       Date:  2021-05-18       Impact factor: 5.157

7.  Unveiling a Drift Resistant Cryptotope within Marburgvirus Nucleoprotein Recognized by Llama Single-Domain Antibodies.

Authors:  John Anthony Garza; Alexander Bryan Taylor; Laura Jo Sherwood; Peter John Hart; Andrew Hayhurst
Journal:  Front Immunol       Date:  2017-10-02       Impact factor: 7.561

8.  Deep-sequencing of Marburg virus genome during sequential mouse passaging and cell-culture adaptation reveals extensive changes over time.

Authors:  Haiyan Wei; Jonathan Audet; Gary Wong; Shihua He; Xueyong Huang; Todd Cutts; Steven Theriault; Bianli Xu; Gary Kobinger; Xiangguo Qiu
Journal:  Sci Rep       Date:  2017-06-13       Impact factor: 4.379

9.  Plasma membrane association facilitates conformational changes in the Marburg virus protein VP40 dimer.

Authors:  Nisha Bhattarai; Jeevan B Gc; Bernard S Gerstman; Robert V Stahelin; Prem P Chapagain
Journal:  RSC Adv       Date:  2017-04-26       Impact factor: 3.361

10.  Detection of lipid-induced structural changes of the Marburg virus matrix protein VP40 using hydrogen/deuterium exchange-mass spectrometry.

Authors:  Kaveesha J Wijesinghe; Sarah Urata; Nisha Bhattarai; Edgar E Kooijman; Bernard S Gerstman; Prem P Chapagain; Sheng Li; Robert V Stahelin
Journal:  J Biol Chem       Date:  2017-02-06       Impact factor: 5.157

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