Literature DB >> 26653251

Track structure modeling in liquid water: A review of the Geant4-DNA very low energy extension of the Geant4 Monte Carlo simulation toolkit.

M A Bernal1, M C Bordage2, J M C Brown3, M Davídková4, E Delage5, Z El Bitar6, S A Enger7, Z Francis8, S Guatelli9, V N Ivanchenko10, M Karamitros11, I Kyriakou12, L Maigne5, S Meylan13, K Murakami14, S Okada14, H Payno5, Y Perrot5, I Petrovic15, Q T Pham5, A Ristic-Fira15, T Sasaki14, V Štěpán4, H N Tran16, C Villagrasa13, S Incerti17.   

Abstract

Understanding the fundamental mechanisms involved in the induction of biological damage by ionizing radiation remains a major challenge of today's radiobiology research. The Monte Carlo simulation of physical, physicochemical and chemical processes involved may provide a powerful tool for the simulation of early damage induction. The Geant4-DNA extension of the general purpose Monte Carlo Geant4 simulation toolkit aims to provide the scientific community with an open source access platform for the mechanistic simulation of such early damage. This paper presents the most recent review of the Geant4-DNA extension, as available to Geant4 users since June 2015 (release 10.2 Beta). In particular, the review includes the description of new physical models for the description of electron elastic and inelastic interactions in liquid water, as well as new examples dedicated to the simulation of physicochemical and chemical stages of water radiolysis. Several implementations of geometrical models of biological targets are presented as well, and the list of Geant4-DNA examples is described.
Copyright © 2015 Associazione Italiana di Fisica Medica. Published by Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Geant4-DNA; Ionizing radiation; Monte Carlo; Radiobiology; Radiolysis

Mesh:

Substances:

Year:  2015        PMID: 26653251     DOI: 10.1016/j.ejmp.2015.10.087

Source DB:  PubMed          Journal:  Phys Med        ISSN: 1120-1797            Impact factor:   2.685


  77 in total

1.  Systematic microdosimetric data for protons of therapeutic energies calculated with Geant4-DNA.

Authors:  Oleg N Vassiliev; Christine B Peterson; Wenhua Cao; David R Grosshans; Radhe Mohan
Journal:  Phys Med Biol       Date:  2019-11-04       Impact factor: 3.609

2.  Monte Carlo single-cell dosimetry using Geant4-DNA: the effects of cell nucleus displacement and rotation on cellular S values.

Authors:  Ramak Salim; Payvand Taherparvar
Journal:  Radiat Environ Biophys       Date:  2019-03-29       Impact factor: 1.925

Review 3.  Proton relative biological effectiveness (RBE): a multiscale problem.

Authors:  Tracy Sa Underwood; Stephen J McMahon
Journal:  Br J Radiol       Date:  2018-07-26       Impact factor: 3.039

4.  Dependence of gold nanoparticle radiosensitization on cell geometry.

Authors:  Wonmo Sung; Sung-Joon Ye; Aimee L McNamara; Stephen J McMahon; James Hainfeld; Jungwook Shin; Henry M Smilowitz; Harald Paganetti; Jan Schuemann
Journal:  Nanoscale       Date:  2017-05-11       Impact factor: 7.790

5.  Using the Proton Energy Spectrum and Microdosimetry to Model Proton Relative Biological Effectiveness.

Authors:  Mark Newpower; Darshana Patel; Lawrence Bronk; Fada Guan; Pankaj Chaudhary; Stephen J McMahon; Kevin M Prise; Giuseppe Schettino; David R Grosshans; Radhe Mohan
Journal:  Int J Radiat Oncol Biol Phys       Date:  2019-02-05       Impact factor: 7.038

6.  Independent reaction times method in Geant4-DNA: Implementation and performance.

Authors:  José Ramos-Méndez; Wook-Geun Shin; Mathieu Karamitros; Jorge Domínguez-Kondo; Ngoc Hoang Tran; Sebastien Incerti; Carmen Villagrasa; Yann Perrot; Václav Štěpán; Shogo Okada; Eduardo Moreno-Barbosa; Bruce Faddegon
Journal:  Med Phys       Date:  2020-10-15       Impact factor: 4.071

7.  A parameter sensitivity study for simulating DNA damage after proton irradiation using TOPAS-nBio.

Authors:  Hongyu Zhu; Aimee L McNamara; Jose Ramos-Mendez; Stephen J McMahon; Nicholas T Henthorn; Bruce Faddegon; Kathryn D Held; Joseph Perl; Junli Li; Harald Paganetti; Jan Schuemann
Journal:  Phys Med Biol       Date:  2020-04-23       Impact factor: 3.609

8.  The influence of Geant4-DNA toolkit parameters on electron microdosimetric track structure.

Authors:  Yidi Wang; Zhanpeng Li; Shuyuan Zhang; Wei Tang; Xiang Li; Dandan Chen; Liang Sun
Journal:  J Radiat Res       Date:  2020-01-23       Impact factor: 2.724

Review 9.  Modelling variable proton relative biological effectiveness for treatment planning.

Authors:  Aimee McNamara; Henning Willers; Harald Paganetti
Journal:  Br J Radiol       Date:  2019-11-18       Impact factor: 3.039

10.  TOPAS-nBio: An Extension to the TOPAS Simulation Toolkit for Cellular and Sub-cellular Radiobiology.

Authors:  J Schuemann; A L McNamara; J Ramos-Méndez; J Perl; K D Held; H Paganetti; S Incerti; B Faddegon
Journal:  Radiat Res       Date:  2019-01-04       Impact factor: 2.841

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