Literature DB >> 26649992

Rapid Fractionation and Isolation of Whole Blood Components in Samples Obtained from a Community-based Setting.

Amy Weckle1, Allison E Aiello2, Monica Uddin3, Sandro Galea4, Rebecca M Coulborn5, Richelo Soliven6, Helen Meier5, Derek E Wildman7.   

Abstract

Collection and processing of whole blood samples in a non-clinical setting offers a unique opportunity to evaluate community-dwelling individuals both with and without preexisting conditions. Rapid processing of these samples is essential to avoid degradation of key cellular components. Included here are methods for simultaneous peripheral blood mononuclear cell (PBMC), DNA, RNA and serum isolation from a single blood draw performed in the homes of consenting participants across a metropolitan area, with processing initiated within 2 hr of collection. We have used these techniques to process over 1,600 blood specimens yielding consistent, high quality material, which has subsequently been used in successful DNA methylation, genotyping, gene expression and flow cytometry analyses. Some of the methods employed are standard; however, when combined in the described manner, they enable efficient processing of samples from participants of population- and/or community-based studies who would not normally be evaluated in a clinical setting. Therefore, this protocol has the potential to obtain samples (and subsequently data) that are more representative of the general population.

Entities:  

Year:  2015        PMID: 26649992      PMCID: PMC4692771          DOI: 10.3791/52227

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  16 in total

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2.  Cohort Profile: Generation Scotland: Scottish Family Health Study (GS:SFHS). The study, its participants and their potential for genetic research on health and illness.

Authors:  Blair H Smith; Archie Campbell; Pamela Linksted; Bridie Fitzpatrick; Cathy Jackson; Shona M Kerr; Ian J Deary; Donald J Macintyre; Harry Campbell; Mark McGilchrist; Lynne J Hocking; Lucy Wisely; Ian Ford; Robert S Lindsay; Robin Morton; Colin N A Palmer; Anna F Dominiczak; David J Porteous; Andrew D Morris
Journal:  Int J Epidemiol       Date:  2012-07-10       Impact factor: 7.196

3.  Associations between the SS variant of 5-HTTLPR and PTSD among adults with histories of childhood emotional abuse: results from two African American independent samples.

Authors:  Kate Walsh; Monica Uddin; Richelo Soliven; Derek E Wildman; Bekh Bradley
Journal:  J Affect Disord       Date:  2014-03-12       Impact factor: 4.839

4.  Lymphocyte subset differences in patients with chronic fatigue syndrome, multiple sclerosis and major depression.

Authors:  M J Robertson; R S Schacterle; G A Mackin; S N Wilson; K L Bloomingdale; J Ritz; A L Komaroff
Journal:  Clin Exp Immunol       Date:  2005-08       Impact factor: 4.330

5.  SLC6A4 methylation modifies the effect of the number of traumatic events on risk for posttraumatic stress disorder.

Authors:  Karestan C Koenen; Monica Uddin; Shun-Chiao Chang; Allison E Aiello; Derek E Wildman; Emily Goldmann; Sandro Galea
Journal:  Depress Anxiety       Date:  2011-05-23       Impact factor: 6.505

6.  Evaluation of the effect of selective serotonin-reuptake inhibitors on lymphocyte subsets in patients with a major depressive disorder.

Authors:  Maria Eugenia Hernandez; Daniel Martinez-Fong; Mayra Perez-Tapia; Iris Estrada-Garcia; Sergio Estrada-Parra; Lenin Pavón
Journal:  Eur Neuropsychopharmacol       Date:  2009-12-11       Impact factor: 4.600

7.  Delay in processing porcine whole blood affects cytokine expression.

Authors:  J C Duvigneau; R T Hartl; M Teinfalt; M Gemeiner
Journal:  J Immunol Methods       Date:  2003-01-15       Impact factor: 2.303

Review 8.  Isolation and preservation of peripheral blood mononuclear cells for analysis of islet antigen-reactive T cell responses: position statement of the T-Cell Workshop Committee of the Immunology of Diabetes Society.

Authors:  R Mallone; S I Mannering; B M Brooks-Worrell; I Durinovic-Belló; C M Cilio; F S Wong; N C Schloot
Journal:  Clin Exp Immunol       Date:  2010-10-05       Impact factor: 4.330

9.  Epigenetic and inflammatory marker profiles associated with depression in a community-based epidemiologic sample.

Authors:  M Uddin; K C Koenen; A E Aiello; D E Wildman; R de los Santos; S Galea
Journal:  Psychol Med       Date:  2010-09-14       Impact factor: 7.723

10.  Allele-specific FKBP5 DNA demethylation mediates gene-childhood trauma interactions.

Authors:  Torsten Klengel; Divya Mehta; Christoph Anacker; Monika Rex-Haffner; Jens C Pruessner; Carmine M Pariante; Thaddeus W W Pace; Kristina B Mercer; Helen S Mayberg; Bekh Bradley; Charles B Nemeroff; Florian Holsboer; Christine M Heim; Kerry J Ressler; Theo Rein; Elisabeth B Binder
Journal:  Nat Neurosci       Date:  2012-12-02       Impact factor: 24.884

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1.  Methylomic profiles reveal sex-specific differences in leukocyte composition associated with post-traumatic stress disorder.

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Journal:  Brain Behav Immun       Date:  2019-06-19       Impact factor: 7.217

2.  PTSD is associated with an increase in aged T cell phenotypes in adults living in Detroit.

Authors:  Allison E Aiello; Jennifer B Dowd; Bamini Jayabalasingham; Lydia Feinstein; Monica Uddin; Amanda M Simanek; Caroline K Cheng; Sandro Galea; Derek E Wildman; Karestan Koenen; Graham Pawelec
Journal:  Psychoneuroendocrinology       Date:  2016-02-03       Impact factor: 4.905

3.  DNA methylation of Nuclear Factor of Activated T Cells 1 mediates the prospective relation between exposure to different traumatic event types and post-traumatic stress disorder.

Authors:  James R Occean; Agaz H Wani; Janelle Donglasan; Allison E Aiello; Sandro Galea; Karestan C Koenen; Annie Qu; Derek E Wildman; Monica Uddin
Journal:  Psychiatry Res       Date:  2022-03-19       Impact factor: 11.225

4.  Socioeconomic status, financial stress, and glucocorticoid resistance among youth with asthma: Testing the moderation effects of maternal involvement and warmth.

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5.  Investigating gene expression profiles of whole blood and peripheral blood mononuclear cells using multiple collection and processing methods.

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Journal:  PLoS One       Date:  2019-12-06       Impact factor: 3.240

6.  Severity of bovine tuberculosis is associated with innate immune-biased transcriptional signatures of whole blood in early weeks after experimental Mycobacterium bovis infection.

Authors:  Jayne E Wiarda; Paola M Boggiatto; Darrell O Bayles; W Ray Waters; Tyler C Thacker; Mitchell V Palmer
Journal:  PLoS One       Date:  2020-11-09       Impact factor: 3.240

7.  SARS-CoV-2 Infection in Health Care Personnel and Their Household Contacts at a Tertiary Academic Medical Center: Protocol for a Longitudinal Cohort Study.

Authors:  Emily J Ciccone; Paul N Zivich; Evans K Lodge; Deanna Zhu; Elle Law; Elyse Miller; Jasmine L Taylor; Suemin Chung; Jason Xu; Alexander Volfovsky; Cherese Beatty; Haley Abernathy; Elise King; Haley E Garrett; Alena J Markmann; Meghan E Rebuli; Subhashini Sellers; David J Weber; Raquel Reyes; Naseem Alavian; Jonathan J Juliano; Ross M Boyce; Allison E Aiello
Journal:  JMIR Res Protoc       Date:  2021-04-30

8.  SARS-CoV-2 infection in central North Carolina: Protocol for a population-based longitudinal cohort study and preliminary participant results.

Authors:  Elyse M Miller; Elle A Law; Rawan Ajeen; Jaclyn Karasik; Carmen Mendoza; Haley Abernathy; Haley Garrett; Elise King; John Wallace; Michael Zelek; Jessie K Edwards; Khou Xiong; Cherese Beatty; Aaron T Fleischauer; Emily J Ciccone; Bonnie E Shook-Sa; Allison E Aiello; Ross M Boyce
Journal:  PLoS One       Date:  2021-10-25       Impact factor: 3.240

9.  Genetic control of the dynamic transcriptional response to immune stimuli and glucocorticoids at single cell resolution.

Authors:  Justyna A Resztak; Julong Wei; Samuele Zilioli; Edward Sendler; Adnan Alazizi; Henriette E Mair-Meijers; Peijun Wu; Richard B Slatcher; Xiang Zhou; Francesca Luca; Roger Pique-Regi
Journal:  bioRxiv       Date:  2022-03-15

10.  Psychosocial experiences modulate asthma-associated genes through gene-environment interactions.

Authors:  Justyna A Resztak; Allison K Farrell; Henriette Mair-Meijers; Adnan Alazizi; Xiaoquan Wen; Derek E Wildman; Samuele Zilioli; Richard B Slatcher; Roger Pique-Regi; Francesca Luca
Journal:  Elife       Date:  2021-06-18       Impact factor: 8.713

  10 in total

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