Literature DB >> 26645192

Chimeric human mitochondrial PheRS exhibits editing activity to discriminate nonprotein amino acids.

Ekaterine Kartvelishvili1, Moshe Peretz1, Dmitry Tworowski1, Nina Moor2, Mark Safro1.   

Abstract

Mitochondria are considered as the primary source of reactive oxygen species (ROS) in nearly all eukaryotic cells during respiration. The harmful effects of these compounds range from direct neurotoxicity to incorporation into proteins producing aberrant molecules with multiple physiological problems. Phenylalanine exposure to ROS produces multiple oxidized isomers: tyrosine, Levodopa, ortho-Tyr, meta-Tyr (m-Tyr), and so on. Cytosolic phenylalanyl-tRNA synthetase (PheRS) exerts control over the translation accuracy, hydrolyzing misacylated products, while monomeric mitochondrial PheRS lacks the editing activity. Recently we showed that "teamwork" of cytosolic and mitochondrial PheRSs cannot prevent incorporation of m-Tyr and l-Dopa into proteins. Here, we present human mitochondrial chimeric PheRS with implanted editing module taken from EcPheRS. The monomeric mitochondrial chimera possesses editing activity, while in bacterial and cytosolic PheRSs this type of activity was detected for the (αβ)2 architecture only. The fusion protein catalyzes aminoacylation of tRNA(Phe) with cognate phenylalanine and effectively hydrolyzes the noncognate aminoacyl-tRNAs: Tyr-tRNA(Phe) and m-Tyr-tRNA(Phe) .
© 2015 The Protein Society.

Entities:  

Keywords:  ROS-damaged amino acid; aminoacyl-tRNA synthetases; aminoacylation; chimera; editing; fusion protein

Mesh:

Substances:

Year:  2015        PMID: 26645192      PMCID: PMC4815416          DOI: 10.1002/pro.2855

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  33 in total

Review 1.  Aminoacyl-tRNA synthesis.

Authors:  M Ibba; D Soll
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Review 2.  Empirical force fields for biological macromolecules: overview and issues.

Authors:  Alexander D Mackerell
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

3.  The yeast VAS1 gene encodes both mitochondrial and cytoplasmic valyl-tRNA synthetases.

Authors:  B Chatton; P Walter; J P Ebel; F Lacroute; F Fasiolo
Journal:  J Biol Chem       Date:  1988-01-05       Impact factor: 5.157

4.  Rapid deacylation by isoleucyl transfer ribonucleic acid synthetase of isoleucine-specific transfer ribonucleic acid aminoacylated with valine.

Authors:  E W Eldred; P R Schimmel
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Authors:  G Souciet; B Menand; J Ovesna; A Cosset; A Dietrich; H Wintz
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6.  The human EPRS locus (formerly the QARS locus): a gene encoding a class I and a class II aminoacyl-tRNA synthetase.

Authors:  E Kaiser; B Hu; S Becher; D Eberhard; B Schray; M Baack; H Hameister; R Knippers
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7.  Editing mechanisms in protein synthesis. Rejection of valine by the isoleucyl-tRNA synthetase.

Authors:  A R Fersht
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8.  The HTS1 gene encodes both the cytoplasmic and mitochondrial histidine tRNA synthetases of S. cerevisiae.

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