Literature DB >> 26644467

α-Synuclein Amyloid Fibrils with Two Entwined, Asymmetrically Associated Protofibrils.

Altaira D Dearborn1, Joseph S Wall2, Naiqian Cheng1, J Bernard Heymann1, Andrey V Kajava3, Jobin Varkey4, Ralf Langen5, Alasdair C Steven6.   

Abstract

Parkinson disease and other progressive neurodegenerative conditions are characterized by the intracerebral presence of Lewy bodies, containing amyloid fibrils of α-synuclein. We used cryo-electron microscopy and scanning transmission electron microscopy (STEM) to study in vitro-assembled fibrils. These fibrils are highly polymorphic. Focusing on twisting fibrils with an inter-crossover spacing of 77 nm, our reconstructions showed them to consist of paired protofibrils. STEM mass per length data gave one subunit per 0.47 nm axial rise per protofibril, consistent with a superpleated β-structure. The STEM images show two thread-like densities running along each of these fibrils, which we interpret as ladders of metal ions. These threads confirmed the two-protofibril architecture of the 77-nm twisting fibrils and allowed us to identify this morphotype in STEM micrographs. Some other, but not all, fibril morphotypes also exhibit dense threads, implying that they also present a putative metal binding site. We propose a molecular model for the protofibril and suggest that polymorphic variant fibrils have different numbers of protofibrils that are associated differently.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  amyloid; cross-β structure; cryo-electron microscopy; fibril; metalloprotein; microscopic imaging; microscopy; molecular mass measurements; scanning transmission electron microscopy; superpleated β structure

Mesh:

Substances:

Year:  2015        PMID: 26644467      PMCID: PMC4732214          DOI: 10.1074/jbc.M115.698787

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  43 in total

1.  Fiber diffraction of synthetic alpha-synuclein filaments shows amyloid-like cross-beta conformation.

Authors:  L C Serpell; J Berriman; R Jakes; M Goedert; R A Crowther
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-25       Impact factor: 11.205

Review 2.  Accelerated oligomerization by Parkinson's disease linked alpha-synuclein mutants.

Authors:  K A Conway; S J Lee; J C Rochet; T T Ding; J D Harper; R E Williamson; P T Lansbury
Journal:  Ann N Y Acad Sci       Date:  2000       Impact factor: 5.691

Review 3.  Structure and mass analysis by scanning transmission electron microscopy.

Authors:  S A Müller; A Engel
Journal:  Micron       Date:  2001-01       Impact factor: 2.251

4.  Characterisation of isolated alpha-synuclein filaments from substantia nigra of Parkinson's disease brain.

Authors:  R A Crowther; S E Daniel; M Goedert
Journal:  Neurosci Lett       Date:  2000-10-06       Impact factor: 3.046

5.  Structural organization of alpha-synuclein fibrils studied by site-directed spin labeling.

Authors:  Ani Der-Sarkissian; Christine C Jao; Jeannie Chen; Ralf Langen
Journal:  J Biol Chem       Date:  2003-06-18       Impact factor: 5.157

6.  A model for Ure2p prion filaments and other amyloids: the parallel superpleated beta-structure.

Authors:  Andrey V Kajava; Ulrich Baxa; Reed B Wickner; Alasdair C Steven
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-13       Impact factor: 11.205

7.  Amyloid fibrils are the molecular trigger of inflammation in Parkinson's disease.

Authors:  Adelin Gustot; José Ignacio Gallea; Rabia Sarroukh; María Soledad Celej; Jean-Marie Ruysschaert; Vincent Raussens
Journal:  Biochem J       Date:  2015-08-13       Impact factor: 3.857

8.  Fibrils formed in vitro from alpha-synuclein and two mutant forms linked to Parkinson's disease are typical amyloid.

Authors:  K A Conway; J D Harper; P T Lansbury
Journal:  Biochemistry       Date:  2000-03-14       Impact factor: 3.162

9.  Impact of the acidic C-terminal region comprising amino acids 109-140 on alpha-synuclein aggregation in vitro.

Authors:  Wolfgang Hoyer; Dmitry Cherny; Vinod Subramaniam; Thomas M Jovin
Journal:  Biochemistry       Date:  2004-12-28       Impact factor: 3.162

10.  α-Synuclein strains cause distinct synucleinopathies after local and systemic administration.

Authors:  W Peelaerts; L Bousset; A Van der Perren; A Moskalyuk; R Pulizzi; M Giugliano; C Van den Haute; R Melki; V Baekelandt
Journal:  Nature       Date:  2015-06-10       Impact factor: 49.962

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  23 in total

1.  Taking a Bite Out of Amyloid: Mechanistic Insights into α-Synuclein Degradation by Cathepsin L.

Authors:  Ryan P McGlinchey; Gifty A Dominah; Jennifer C Lee
Journal:  Biochemistry       Date:  2017-06-28       Impact factor: 3.162

Review 2.  Membranes as modulators of amyloid protein misfolding and target of toxicity.

Authors:  Anoop Rawat; Ralf Langen; Jobin Varkey
Journal:  Biochim Biophys Acta Biomembr       Date:  2018-04-25       Impact factor: 3.747

3.  Protein folding, misfolding and aggregation: The importance of two-electron stabilizing interactions.

Authors:  Andrzej Stanisław Cieplak
Journal:  PLoS One       Date:  2017-09-18       Impact factor: 3.240

4.  Guidelines for using Bsoft for high resolution reconstruction and validation of biomolecular structures from electron micrographs.

Authors:  J Bernard Heymann
Journal:  Protein Sci       Date:  2017-10-09       Impact factor: 6.725

5.  Structural features of α-synuclein amyloid fibrils revealed by Raman spectroscopy.

Authors:  Jessica D Flynn; Ryan P McGlinchey; Robert L Walker; Jennifer C Lee
Journal:  J Biol Chem       Date:  2017-11-30       Impact factor: 5.157

6.  A Protofilament-Protofilament Interface in the Structure of Mouse α-Synuclein Fibrils.

Authors:  Guohua Lv; Ashutosh Kumar; Yun Huang; David Eliezer
Journal:  Biophys J       Date:  2018-06-19       Impact factor: 4.033

7.  Modification of C Terminus Provides New Insights into the Mechanism of α-Synuclein Aggregation.

Authors:  Kseniia Afitska; Anna Fucikova; Volodymyr V Shvadchak; Dmytro A Yushchenko
Journal:  Biophys J       Date:  2017-09-20       Impact factor: 4.033

Review 8.  Interplay between α-synuclein amyloid formation and membrane structure.

Authors:  Emma I O'Leary; Jennifer C Lee
Journal:  Biochim Biophys Acta Proteins Proteom       Date:  2018-10-02       Impact factor: 3.036

9.  Modulation of the extent of structural heterogeneity in α-synuclein fibrils by the small molecule thioflavin T.

Authors:  Harish Kumar; Jogender Singh; Pratibha Kumari; Jayant B Udgaonkar
Journal:  J Biol Chem       Date:  2017-07-31       Impact factor: 5.157

Review 10.  Self-assembling peptide and protein amyloids: from structure to tailored function in nanotechnology.

Authors:  Gang Wei; Zhiqiang Su; Nicholas P Reynolds; Paolo Arosio; Ian W Hamley; Ehud Gazit; Raffaele Mezzenga
Journal:  Chem Soc Rev       Date:  2017-07-31       Impact factor: 54.564

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