Literature DB >> 26638775

Paralogue Interference Affects the Dynamics after Gene Duplication.

Elisabeth Kaltenegger1, Dietrich Ober2.   

Abstract

Proteins tend to form homomeric complexes of identical subunits, which act as functional units. By definition, the subunits are encoded from a single genetic locus. When such a gene is duplicated, the gene products are suggested initially to cross-interact when coexpressed, thus resulting in the phenomenon of paralogue interference. In this opinion article, we explore how paralogue interference can shape the fate of a duplicated gene. One important outcome is a prolonged time window in which both copies remain under selection increasing the chance to accumulate mutations and to develop new properties. Thereby, paralogue interference can mediate the coevolution of duplicates and here we illustrate the potential of this phenomenon in light of recent new studies.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Keywords:  gene duplication; paralogue interference; protein evolution; selective pressure

Mesh:

Substances:

Year:  2015        PMID: 26638775     DOI: 10.1016/j.tplants.2015.10.003

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN: 1360-1385            Impact factor:   18.313


  16 in total

1.  Gene Duplicability of Core Genes Is Highly Consistent across All Angiosperms.

Authors:  Zhen Li; Jonas Defoort; Setareh Tasdighian; Steven Maere; Yves Van de Peer; Riet De Smet
Journal:  Plant Cell       Date:  2016-01-07       Impact factor: 11.277

2.  Characterization of DNA methyltransferase and demethylase genes in Fragaria vesca.

Authors:  Tingting Gu; Shuai Ren; Yuanhua Wang; Yuhui Han; Yi Li
Journal:  Mol Genet Genomics       Date:  2016-03-08       Impact factor: 3.291

3.  The role of structural pleiotropy and regulatory evolution in the retention of heteromers of paralogs.

Authors:  Axelle Marchant; Angel F Cisneros; Alexandre K Dubé; Isabelle Gagnon-Arsenault; Diana Ascencio; Honey Jain; Simon Aubé; Chris Eberlein; Daniel Evans-Yamamoto; Nozomu Yachie; Christian R Landry
Journal:  Elife       Date:  2019-08-27       Impact factor: 8.140

Review 4.  Evolution of Gene Duplication in Plants.

Authors:  Nicholas Panchy; Melissa Lehti-Shiu; Shin-Han Shiu
Journal:  Plant Physiol       Date:  2016-06-10       Impact factor: 8.340

5.  A hydrophobic ratchet entrenches molecular complexes.

Authors:  Georg K A Hochberg; Yang Liu; Erik G Marklund; Brian P H Metzger; Arthur Laganowsky; Joseph W Thornton
Journal:  Nature       Date:  2020-12-09       Impact factor: 49.962

6.  Biochemical characterization of metabolism-based atrazine resistance in Amaranthus tuberculatus and identification of an expressed GST associated with resistance.

Authors:  Anton F Evans; Sarah R O'Brien; Rong Ma; Aaron G Hager; Chance W Riggins; Kris N Lambert; Dean E Riechers
Journal:  Plant Biotechnol J       Date:  2017-03-29       Impact factor: 9.803

7.  The effects of repeated whole genome duplication events on the evolution of cytokinin signaling pathway.

Authors:  Elisabeth Kaltenegger; Svetlana Leng; Alexander Heyl
Journal:  BMC Evol Biol       Date:  2018-05-29       Impact factor: 3.260

8.  Paralog dependency indirectly affects the robustness of human cells.

Authors:  Rohan Dandage; Christian R Landry
Journal:  Mol Syst Biol       Date:  2019-09       Impact factor: 11.429

9.  Phylogenomic analysis demonstrates a pattern of rare and long-lasting concerted evolution in prokaryotes.

Authors:  Sishuo Wang; Youhua Chen
Journal:  Commun Biol       Date:  2018-02-08

10.  A pair of E3 ubiquitin ligases compete to regulate filopodial dynamics and axon guidance.

Authors:  Nicholas P Boyer; Laura E McCormick; Shalini Menon; Fabio L Urbina; Stephanie L Gupton
Journal:  J Cell Biol       Date:  2020-01-06       Impact factor: 10.539

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