Literature DB >> 26633049

Empirical Valence-Bond Models for Reactive Potential Energy Surfaces Using Distributed Gaussians.

H Bernhard Schlegel1, Jason L Sonnenberg1.   

Abstract

A new method for constructing empirical valence bond potential energy surfaces for reactions is presented. Building on the generalized Gaussian approach of Chang-Miller, V12(2)(q) is represented by a Gaussian times a polynomial at the transition state and generalized to handle any number of data points on the potential energy surface. The method is applied to two model surfaces and the HCN isomerization reaction. The applications demonstrate that the present method overcomes the divergence problems encountered in some other approaches. The use of Cartesian versus internal or redundant internal coordinates is discussed.

Entities:  

Year:  2006        PMID: 26633049     DOI: 10.1021/ct600084p

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  8 in total

1.  Three applications of path integrals: equilibrium and kinetic isotope effects, and the temperature dependence of the rate constant of the [1,5] sigmatropic hydrogen shift in (Z)-1,3-pentadiene.

Authors:  Tomáš Zimmermann; Jiří Vaníček
Journal:  J Mol Model       Date:  2010-04-30       Impact factor: 1.810

2.  Molecular Mechanisms of DNA Replication and Repair Machinery: Insights from Microscopic Simulations.

Authors:  Christopher Maffeo; Han-Yi Chou; Aleksei Aksimentiev
Journal:  Adv Theory Simul       Date:  2019-02-12

3.  Proton Transfer Studied Using a Combined Ab Initio Reactive Potential Energy Surface with Quantum Path Integral Methodology.

Authors:  Kim F Wong; Jason L Sonnenberg; Francesco Paesani; Takeshi Yamamoto; Jiří Vaníček; Wei Zhang; H Bernhard Schlegel; David A Case; Thomas E Cheatham; William H Miller; Gregory A Voth
Journal:  J Chem Theory Comput       Date:  2010-09-14       Impact factor: 6.006

4.  Block-Localized Density Functional Theory (BLDFT), Diabatic Coupling, and Their Use in Valence Bond Theory for Representing Reactive Potential Energy Surfaces.

Authors:  Alessandro Cembran; Lingchun Song; Yirong Mo; Jiali Gao
Journal:  J Chem Theory Comput       Date:  2009-10-13       Impact factor: 6.006

5.  A Non-Orthogonal Block-Localized Effective Hamiltonian Approach for Chemical and Enzymatic Reactions.

Authors:  Alessandro Cembran; Apirak Payaka; Yen-Lin Lin; Wangshen Xie; Yirong Mo; Lingchun Song; Jiali Gao
Journal:  J Chem Theory Comput       Date:  2010-07-13       Impact factor: 6.006

6.  On the construction of diabatic and adiabatic potential energy surfaces based on ab initio valence bond theory.

Authors:  Lingchun Song; Jiali Gao
Journal:  J Phys Chem A       Date:  2008-12-18       Impact factor: 2.781

7.  An Effective Hamiltonian Molecular Orbital-Valence Bond (MOVB) Approach for Chemical Reactions Applied to the Nucleophilic Substitution Reaction of Hydrosulfide Ion and Chloromethane.

Authors:  Lingchun Song; Yirong Mo; Jiali Gao
Journal:  J Chem Theory Comput       Date:  2009-01-01       Impact factor: 6.006

8.  Perspective on Diabatic Models of Chemical Reactivity as Illustrated by the Gas-Phase S(N)2 Reaction of Acetate Ion with 1,2-Dichloroethane.

Authors:  Rosendo Valero; Lingchun Song; Jiali Gao; Donald G Truhlar
Journal:  J Chem Theory Comput       Date:  2009-01-01       Impact factor: 6.006

  8 in total

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