| Literature DB >> 26632390 |
Kwangha Lee1, Youjin Chang2, Kyuyoung Song3, Yun Young Park4, Jin Won Huh4, Sang Bum Hong4, Chae Man Lim4, Younsuck Koh5.
Abstract
PURPOSE: High mobility group box 1 (HMGB1) plays a central role in the pathogenesis of sepsis and multiple organ dysfunction syndromes. We investigated the associations of a single nucleotide polymorphism (SNP; rs1045411) in HMGB1 with various clinical parameters, severity, and prognosis in patients with sepsis, severe sepsis, or septic shock.Entities:
Keywords: High mobility group box 1; rs1045411; sepsis; single nucleotide polymorphisms; the variant A allele
Mesh:
Substances:
Year: 2016 PMID: 26632390 PMCID: PMC4696941 DOI: 10.3349/ymj.2016.57.1.111
Source DB: PubMed Journal: Yonsei Med J ISSN: 0513-5796 Impact factor: 2.759
Fig. 1Genetic map of the three single nucleotide polymorphism (SNP) of the HMGB1. The three long vertical arrows indicate the locations of the three SNPs. E1 to E5 show the locations of the exons. The black boxes are the protein-coding regions, and boxes including oblique lines are untranslated regions (UTR). rs2249825, rs3742305, and rs1045411 are located in the 5'-UTR, intron 4, and the 3'-UTR, respectively.
Baseline Characteristics of Patients at Admission to the Intensive Care Unit
| Characteristics (n) | Total | Survivors (n=155) | Non-survivors (n=57) | |
|---|---|---|---|---|
| Age, yrs | 68 (29-95) | 66 (29-95) | 71 (29-91) | 0.218 |
| Male | 149 (70.3) | 115 (74.2) | 34 (59.6) | 0.044 |
| APACHE II score | 23 (6-40) | 22 (6-38) | 28 (15-40) | <0.001 |
| SOFA score | 10 (3-18) | 10 (3-18) | 12 (4-18) | <0.001 |
| Primary site of infection | ||||
| Respiratory tract | 122 (57.5) | 84 (54.2) | 38 (66.7) | 0.118 |
| Hepatobiliary tracts | 34 (18.0) | 29 (18.7) | 5 (8.8) | 0.093 |
| Urinary tract | 18 (8.5) | 15 (9.7) | 3 (5.3) | 0.410 |
| Gastrointestinal tracts | 14 (6.6) | 10 (6.5) | 4 (7.0) | >0.999 |
| Cutaneous/soft tissue | 7 (3.3) | 5 (3.2) | 2 (3.5) | >0.999 |
| Central nervous system | 3 (1.4) | 2 (1.3) | 1 (1.8) | >0.999 |
| Others | 10 (4.7) | 8 (5.2) | 2 (3.5) | >0.999 |
| Unknown | 5 (2.4) | 3 (1.9) | 2 (3.5) | 0.613 |
| Positive blood culture | 72 (34.0) | 58 (37.4) | 14 (24.6) | 0.102 |
| Gram-positive* | 22 (10.4) | 20 (12.9) | 2 (3.5) | 0.072 |
| Gram-negative† | 49 (23.1) | 39 (25.2) | 10 (17.5) | 0.275 |
| Polymicrobial | 11 (5.2) | 8 (5.2) | 3 (5.3) | >0.999 |
| Fungi‡ | 3 (1.4) | 1 (0.6) | 2 (3.5) | 0.177 |
| White blood cell (103/mm3) (211) | 12600 (600-86700) | 12300 (600-86700) | 12700 (3300-47400) | 0.344 |
| C-reactive protein (mg/dL) (139) | 16.1 (0.1-67.4) | 17.6 (0.1-67.4) | 14.1 (0.9-46.7) | 0.693 |
| Procalcitonin (ng/mL) (57) | 5.1 (0.1-200.0) | 5.1 (0.1-200.0) | 7.0 (0.1-87.6) | 0.661 |
| Lactate (mmol/L) (210) | 1.8 (0.3-15.0) | 1.6 (0.3-13.8) | 2.4 (0.4-15.0) | 0.001 |
| IL-1β (pg/mL) (190) | 6.5 (1.5-219.0) | 6.3 (1.5-219.0) | 6.7 (1.8-133.0) | 0.890 |
| IL-6 (pg/mL) (190) | 140.4 (3.5-16164.5) | 134.0 (3.5-16164.5) | 202.8 (15.6-11562.5) | 0.086 |
| IL-10 (pg/mL) (190) | 33.4 (3.5-22427.5) | 31.7 (3.5-1492.3) | 40.5 (4.2-22427.5) | 0.029 |
| IL-17 (pg/mL) (190) | 6.4 (1.8-317.1) | 6.8 (317.1) | 5.3 (1.9-91.2) | 0.077 |
| HMGB1 (ng/mL) (190) | 16.1 (0.1-310.3) | 15.4 (0.1-84.4) | 18.0 (0.1-310.3) | 0.687 |
| TNF-α (pg/mL) (190) | 17.2 (3.9-249.4) | 17.3 (4.5-249.4) | 17.0 (3.9-193.5) | 0.953 |
APACHE, Acute Physiology and Chronic Health Evaluation; SOFA, Sequential Organ Failure Assessment; IL, interleukin; HMGB1, high mobility group box 1; TNF, tumor necrosis factor.
Data are presented as means (range) (continuous variables) or number (%) (categorical values). Student's t-test or the Mann-Whitney U-test, depending on normality of the distribution, was used to compare continuous variables between two groups. Also, the χ2 and Fisher's exact tests (for small numbers) were used to compare categorical variables.
*Gram-positive bacteria included Streptococcus pneumonia (7), Staphylococcus aureus (5), Streptococcus anginosus (3), Streptococcus constellatus (2), Streptococcus mitis (1), Streptococcus dysgalactiae (1), Streptococcus agalactiae (1), Streptococcus intermedius (1), Enterococcus gallinarum (1), Enterococcus casseliflavus (1), and Peptostreptococcus spp. (1), †Gram-negative bacteria included E.coli (24), Klebsiella pneumonia (12), Pseudomonas aeruginosa (8), Klebsiella oxytoca (5), Aeromonas hydrophilia (2), Bacteroides fragilis (2), Citrobacter koseri (1), Citrobacter freundii (1), Burholderia cepacia (1), Acinetobacter baumanii (1), Providencia rittgeri (1), and Enterobacter aerogens (1), ‡Fungi included Candida grabrata (1) and Candida albicans (1).
Underlying Diseases of Total Patients
| Underlying diseases | n (%) |
|---|---|
| Oncologic disease | 60 (28.3) |
| Chronic heart diseases (ischemic heart disease, arrhythmia, valvular heart disease) | 60 (28.3) |
| Chronic lung diseases (COPD, ILD, destroyed lung caused by various origins) | 57 (26.9) |
| Endocrine disease | 54 (25.5) |
| Chronic liver disease | 31 (14.6) |
| Chronic kidney disease | 23 (10.8) |
| Cerebrovascular disease | 21 (9.9) |
| Musculoskeletal disease | 21 (9.9) |
| Neuromuscular disease | 19 (9.0) |
| Hematologic disease | 14 (6.6) |
| Biliary disease | 13 (6.1) |
| Rheumatologic disease | 8 (3.8) |
| Alimentary disease | 6 (2.8) |
| Others* | 6 (2.8) |
COPD, chronic obstructive pulmonary disease; ILD, interstitial lung disease.
Data are presented as number (%).
*Others included chronic alcoholics (2), mood disorder (1), panic disorder (1), arteriosclerosis obliterans (1), and aortic thrombus (1).
Significant Differences between Patients with GG Genotype and Those with GA+AA Genotype in Subgroups Analyses
| Subgroups | Genotype | ||
|---|---|---|---|
| GG | GA+AA | ||
| Positive Gram-positive culture in male | 5/108 (4.6) | 7/41 (17.1) | 0.020 |
| Positive Gram-negative culture in female | 6/43 (14.0) | 8/20 (40.0) | 0.047 |
| Positive Gram-negative culture in nonsurvivors | 4/41 (9.8) | 6/16 (37.5) | 0.022 |
| Patients with chronic lung diseases | |||
| Positive blood culture | 4/42 (9.5) | 5/15 (33.3) | 0.044 |
| IL-1β (pg/mL) (n=52) | 5.4 (2.2-74.4) | 21.2 (2.9-131.3) | 0.039 |
| IL-6 (pg/mL) (n=52) | 84.1 (7.5-4236.9) | 406.5 (3.5-11562.5) | 0.026 |
| IL-10 (pg/mL) (n=52) | 25.6 (3.9-391.6) | 88.9 (16.5-2398.5) | 0.003 |
| IL-17 (pg/mL) (n=52) | 3.4 (1.8-150.9) | 12.0 (1.8-111.8) | 0.041 |
| TNF-α (pg/mL) (n=52) | 8.6 (4.5-121.4) | 22.8 (7.2-124.2) | 0.007 |
| Patients with diabetes | |||
| Positive blood culture | 9/35 (25.7) | 10/17 (58.8) | 0.032 |
| Positive Gram-negative culture | 5/35 (14.3) | 8/17 (47.1) | 0.017 |
| IL-17 (pg/mL) (n=44) | 7.9 (2.0-158.5) | 22.4 (5.0-274.5) | 0.014 |
| Patients with chronic renal disease | |||
| Development of shock | 8/14 (57.1) | 9/9 (100) | 0.048 |
| Patients with sepsis caused by respiratory tract infection | |||
| IL-10 (pg/mL) (n=108) | 23.9 (3.9-322.1) | 33.5 (7.9-2398.5) | 0.033 |
| IL-17 (pg/mL) (n=108) | 3.6 (1.8-120.1) | 7.0 (1.8-177.5) | 0.048 |
TNF, tumor necrosis factor; IL, interleukin.
Data are presented as median (range) (continuous variables) or applicable patients/total patients (%) (categorical values). Statistical significance was determined using the Mann-Whitney U-test when comparing continuous values, or the chi-square test or Fisher's exact test when comparing categorical values (for small numbers).
Influence of the Variant A Allele of rs1045411 on Patient Mortality Using Univariate Cox Proportional Hazards Models
| The variant A allele of rs1045411 | |||
|---|---|---|---|
| HR | 95% CI | ||
| Total patients | 0.903 | 0.505-1.614 | 0.731 |
| Subgroups | |||
| Septic shock | 0.798 | 0.406-1.566 | 0.511 |
| Patients with positive blood culture | 1.431 | 0.493-4.151 | 0.509 |
| Primary site of infection-respiratory tract | 1.163 | 0.576-2.348 | 0.673 |
| Comorbidity-chronic lung disease | 2.117 | 0.820-5.466 | 0.121 |
| Comorbidity-diabetes | 0.632 | 0.201-1.989 | 0.433 |
HR, hazard ratio; CI, confidence interval.