Literature DB >> 26627402

Toward a Separate Reproduction of the Contributions to the Hartree-Fock and DFT Intermolecular Interaction Energies by Polarizable Molecular Mechanics with the SIBFA Potential.

Jean-Philip Piquemal1, Hilaire Chevreau1, Nohad Gresh1.   

Abstract

Following recent refinements of the SIBFA intermolecular potential to the multipolar electrostatic contribution by inclusion of an explicit 'penetration' component, the short-range repulsion term is augmented with a S(2)/R(2) component. The SIBFA potential, and the behaviors of its individual contributions encompassing polarization and charge transfer, were evaluated in a diversity of hydrogen-bonded complexes as well as in a model stacked complex by comparisons with results from ab initio quantum-chemical (QC) computations with energy decomposition. Close agreements between SIBFA and QC results are found on both the interaction energies and their contributions. Extensions to computations at the DFT level are also presented.

Entities:  

Year:  2007        PMID: 26627402     DOI: 10.1021/ct7000182

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  25 in total

1.  Conformational analysis of a polyconjugated protein-binding ligand by joint quantum chemistry and polarizable molecular mechanics. Addressing the issues of anisotropy, conjugation, polarization, and multipole transferability.

Authors:  Elodie Goldwaser; Benoit de Courcy; Luc Demange; Christiane Garbay; Françoise Raynaud; Reda Hadj-Slimane; Jean-Philip Piquemal; Nohad Gresh
Journal:  J Mol Model       Date:  2014-11-01       Impact factor: 1.810

2.  Molecular simulation methods in drug discovery: a prospective outlook.

Authors:  Xavier Barril; F Javier Luque
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3.  AMOEBA+ Classical Potential for Modeling Molecular Interactions.

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Journal:  J Chem Theory Comput       Date:  2019-06-11       Impact factor: 6.006

4.  Numerical fitting of molecular properties to Hermite Gaussians.

Authors:  G Andrés Cisneros; Dennis Elking; Jean-Philip Piquemal; Thomas A Darden
Journal:  J Phys Chem A       Date:  2007-11-01       Impact factor: 2.781

5.  Density-functional expansion methods: generalization of the auxiliary basis.

Authors:  Timothy J Giese; Darrin M York
Journal:  J Chem Phys       Date:  2011-05-21       Impact factor: 3.488

6.  Classical Pauli repulsion: An anisotropic, atomic multipole model.

Authors:  Joshua A Rackers; Jay W Ponder
Journal:  J Chem Phys       Date:  2019-02-28       Impact factor: 3.488

7.  Directional Dependence of Hydrogen Bonds: a Density-based Energy Decomposition Analysis and Its Implications on Force Field Development.

Authors:  Zhenyu Lu; Nengjie Zhou; Qin Wu; Yingkai Zhang
Journal:  J Chem Theory Comput       Date:  2011-12-13       Impact factor: 6.006

8.  Improved parameterization of interatomic potentials for rare gas dimers with density-based energy decomposition analysis.

Authors:  Nengjie Zhou; Zhenyu Lu; Qin Wu; Yingkai Zhang
Journal:  J Chem Phys       Date:  2014-06-07       Impact factor: 3.488

9.  Determining polarizable force fields with electrostatic potentials from quantum mechanical linear response theory.

Authors:  Hao Wang; Weitao Yang
Journal:  J Chem Phys       Date:  2016-06-14       Impact factor: 3.488

10.  Molecular Dynamics Simulations of Ionic Liquids and Electrolytes Using Polarizable Force Fields.

Authors:  Dmitry Bedrov; Jean-Philip Piquemal; Oleg Borodin; Alexander D MacKerell; Benoît Roux; Christian Schröder
Journal:  Chem Rev       Date:  2019-05-29       Impact factor: 60.622

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