| Literature DB >> 26622189 |
Andre Ortlieb Guerreiro-Cacais1, Hannes Laaksonen1, Sevasti Flytzani1, Marie N'diaye1, Tomas Olsson1, Maja Jagodic1.
Abstract
Multiple sclerosis (MS) is a complex autoimmune condition with firmly established genetic and environmental components. Genome-wide association studies (GWAS) have revealed a large number of genetic polymorphisms in the vicinity of, and within, genes that associate to disease. However, the significance of these single-nucleotide polymorphisms in disease and possible mechanisms of action remain, with a few exceptions, to be established. While the animal model for MS, experimental autoimmune encephalomyelitis (EAE), has been instrumental in understanding immunity in general and mechanisms of MS disease in particular, much of the translational information gathered from the model in terms of treatment development (glatiramer acetate and natalizumab) has been extensively summarized. In this review, we would thus like to cover the work done in EAE from a GWAS perspective, highlighting the research that has addressed the role of different GWAS genes and their pathways in EAE pathogenesis. Understanding the contribution of these pathways to disease might allow for the stratification of disease subphenotypes in patients and in turn open the possibility for new and individualized treatment approaches in the future.Entities:
Keywords: EAE; autoimmunity; knockouts; multiple sclerosis; pathways; risk genes
Year: 2015 PMID: 26622189 PMCID: PMC4654535 DOI: 10.2147/JIR.S76707
Source DB: PubMed Journal: J Inflamm Res ISSN: 1178-7031
MS risk genes for which EAE data are available
| Chromosome: SNP | CG name | CG function | Cells expressing CG | CG role in EAE | Clinical trials targeting CG | Functional consequence of the SNP |
|---|---|---|---|---|---|---|
| Chrl: rsl 1581062a | Endothelial ligand for VLA-4 (integrin α4β 1) | Endothelium | VC AM 1 is the ligand for α4β1 integrin (VLA-4), important for migration of activated lymphocytes into the CNS | Natalizumab (Tysabri®, Biogen Idec, Weston, MA USA), which blocks the α4β1 integrin, is currently in use as a therapeutic drug in MS | – | |
| Chr2: rs9967792 | Signal transducer; promotes Th1 differentiation in CD4+ T-cells | Primarily CD4+ T-cells | KO mice are completely resistant to EAE | – | – | |
| Chr3: rs2371108 | Transcription factor; regulates differentiation of CD8+T-cells | Widespread during development | – | – | ||
| Chr3: rs4679081 | Chemokine receptor; binds CCL2, CCL4, CCL5, CCL17, and CCL22 | Widespread in the immune system; high expression in Th2 and Tregs cells | KO mice develop less severe EAE, with later onset and lower score | Mogamulizumab (a humanized antibody against CCR4) is currently in use against lymphoma; Phase 1 trial against asthma terminated NCT01514981 | – | |
| Chr3: rs2028597/rs12487066 | E3 ubiquitin-protein ligase, regulates immune receptor signaling | Widespread, with prominence in immune tissue | KO mice have increased incidence and severity | – | The risk allele at rs 12487066 confers lower CBLB expression in CD4+ T-cells and defines carriers as worse IFNβ responders | |
| Chr3: rs2255214/rs9282641 | Costimulatory molecule | APCs | Abatacept (a fusion protein of IgG 1-Fc with the extracellular domain of CTLA-4 that blocks CD86) is currently in use for RA. Phase II trial for MS completed NCT0I116427 | – | ||
| Chr3: rs1014486 | Subunit (p35) of IL-12; promotes Th1 immune responses | APCs | KO mice have unchanged or slightly worse disease | – | – | |
| Chr4: rs7665090/rs228614 | Transcription factor; controls many processes such as inflammation, immunity, cell differentiation, cell growth, tumorigenesis, and apoptosis | Widespread | KO mice show attenuated EAE incidence, clinical score and CNS inflammation | Agents that target the pathway are under trial; | The disease predisposing variant at rs228614 positively correlates with a reduction in spinal cord area | |
| Chr5: rs6881706 | Subunit of the receptors for IL-7 and TSLP | Immune cells of the lymphoid lineage | KO mice, administration of recombinant IL-7 or of neutralizing antibodies to IL-7 show that IL-7 signaling is necessary for disease77–75 | Phase lb trial of anti-IL-7RA (RN168) for RRMS NCT02045732 | – | |
| Chr5: rs6880778 | Receptor for prostaglandin E2 | Widespread | KO mice have reduced severity of disease; EP4 antagonists reduce disease if given before onset but EP4 agonists reduce disease if given after onset | Phase II trial of EP4 agonist for ulcerative colitis (terminated) NCT00296556 | – | |
| Chr5: rs756699 | Transcription factor; important for the differentiation of T-cells | Hematopoietic cells | KO mice as well as wild-type mice adoptively transferred with KO T-cells have more severe disease | – | – | |
| Chr5: rs2546890 | Common subunit (p40) of IL-12 and IL-23. Also exists as a monomer or homodimer | APCs | KO mice have less severe disease; | Phase II trials of anti-IL-12p40 for RRMS NCT00207727 NCT0008667I | – | |
| Chr6: rs17066096 | Soluble antagonist molecule for IL-22 | APCs | KO mice have less severe disease during chronic phase | – | – | |
| Chr6: rs67297943 | Ubiquitin editing enzyme; negatively regulates NF-kB activity | Widespread | Systemic lentiviral knockdown as well as conditional KO in either neuroectodermal cells or in astrocytes results in more severe disease | – | – | |
| Chr7: rs1843938 | Membrane associated scaffold protein; contributes to activation of NF-kB | Hematopoietic cells | KO mice are completely resistant to EAE119 | – | – | |
| Chr7: rs706015 | Cytosolic adaptor molecule; involved in leukocyte adhesion | Ubiquitous | KO mice have less severe EAE151 | – | – | |
| Chr10: rs2104286 | Subunit of the high affinity receptor for IL-2 | High expression in activated T-cells and Tregs | Administration of IL-2 results in less severe disease and administration of soluble CD25 results in more severe disease | Anti-CD25 (daclizumab) has been tested in several Phase III clinical trials and is a potential new treatment for MS. A Phase II trial of low dose IL-2 for RRMS is planned NCT02424396 | – | |
| Chr11: rs523604 | Chemokine receptor; binds CXCL13 | High expression in B-cells and TFH cells; transient expression in activated T-cells | KO not addressed; blockingof the ligand CXCL 13 ameliorates EAE | – | – | |
| Chr12: rs1800693 | Major receptor for TNF | Widespread | KO mice are resistant to EAE; | Blocking TNF induces onset or excarbation of disease | TNFRSF1A SNP rs 1800693 directs the expression of a soluble receptor variant, which mirrors the blocking TNF treatment; | |
| Chr14: rs4903324 | Transcription factor; regulates Th17 differentiation | Hematopoietic cells | KO mice are resistant to EAE; | – | – | |
| Chr14: rs12148050 | Adapter protein; negative regulator of several immune pathways | Hematopoietic cells | Traf3 tg mice have reduced EAE; | – | – | |
| Chr16: rs35929052 | Transcription factor; important for myeloid cell differentiation | B-cells, DCs, and macrophages | KO mice are resistant to EAE; IRF8 Lys-M-cre mice have less severe EAE | – | IRF8 rs 17445836G risk variant is associated with low-type 1IFN levels | |
| Chr17: rs4796791 | Transcription factor; promotes Th17 cell differentiation | Widespread | Conditional KO mice in the T-cell compartment are resistant in EAE | Several STAT3 blocking agents are in clinical trials for different cancers | – | |
| Chr18: rs7238078 | Caspase-like cysteine protease; participates in the activation of NF-kB together with CARMAI and BCLI0 | Hematopoietic cells | KO mice are resistant to EAE; | – | – | |
| Chr19: rs1077667 | Costimulatory ligand; controls APC activation | DCs, T-cells, NK cells, monocytes, and granulocytes | KO mice develop more severe EAE | – | – | |
| Chr19: rs34536443 | Transcription factor; promotes Th1 cell differentiation | Widespread | KO mice are resistant in EAE; | Phase 1 trial of a selective inhibitor (PF-06263276) NCT01981681 | The protective allele at rs34536443 favors a Th2 cytokine secretion profile from in vitro stimulated patient-derived T-cells | |
| Chr 19: rs11554159 | Lysosomal thiol reductase; involved in MHC class II Ag presentation and MHC class 1 cross-presentation | APCs | KO mice are resistant upon MOG35–55 immunization but susceptible upon MOG protein immunization | – | – | |
| Chr20: rs4810485 | Costimulatory molecule; mediates B-cell activation and Ig production as well as DC activation and survival | B-cells, macrophages, DCs, monocytes, astrocytes, endothelial cells | KO mice are resistant in EAE; | Several ongoing trials with agonists and antagonists of the pathway; Phase lla trial of the anti-CD40 monoclonal antibody ASKP1240 in renal transplantation is ongoing NCTO1780844 | – | |
| Chr20: rs6062314 | Immunomodulator; neutralizes the effect of TNF family members | Lymphoid and myeloid cells | Intrathecal administration of DcR3 reduced EAE | – | – | |
| Chr20: rs2248359 | Hydroxylates and inactivates 1,25-dihydroxyvitamin D3 | Primarily kidneys; in the immune system expressed in macrophages, DCs, CD4+ T-cells, and B-cells | Lovastatin ameliorates EAE possibly through inhibition of | – | – | |
| Chr21: rs2283792 | Signal transducer; induces cell growth, differentiation and development | Widespread | IFN-β-la inhibits EAE possibly through upregulation of MAPK1 and 2 phosphorylation | A large number of trials under way with different p38 inhibitors in RA, asthma, and other conditions | – |
Notes:
Data on clinical trials was gathered from https://clinicaltrials.gov/ and https://www.clinicaltrialsregister.eu/.
Abbreviations: MS, multiple sclerosis: SNP, single-nucleotide polymorphism: EAE, experimental autoimmune encephalomyelitis: CG, candidate gene; CNS, central nervous system: APC, antigen presenting cell; TSLP, thymic stromal lymphopoietin; MOG, myelin oligodendrocyte glycoprotein: RRMS, relapsing-remitting MS; RA, rheumatoid arthritis: SLE, systemic lupus erythematosus: MG: myasthenia gravis: KO, knock-out TFH: follicular helper T