Literature DB >> 26613318

Multiple Low-Lying States for Compound I of P450cam and Chloroperoxidase Revealed from Multireference Ab Initio QM/MM Calculations.

Hui Chen1, Jinshuai Song1, Wenzhen Lai1, Wei Wu1, Sason Shaik1.   

Abstract

The hybrid CASPT2/MM approach is employed to systematically study the ground and low-lying excited states of the ultimate active species of the enzymes P450cam and chloroperoxidase (CPO): the oxoiron(IV)-porphyrin cation-radical Por(•+)Fe(IV)═O(Cys) species, the so-called Compound I (Cpd I). The results underscore the fact that the B3LYP/MM method is quite accurate on the most part. However, the CASPT2/MM energies for the ferryl-pentaradicaloid quartet state and the perferryl Fe(V)O doublet and quartet states are significantly lower than the B3LYP/MM results. Thus, while the present CASPT2/MM may still overestimate the stability of these states, nevertheless, taken at its face value, the result raises the question whether these states actually contribute to the reactivity of Cpd I. Our paper tries to grapple with this question in view of (a) the recent speculations that the perferryl Fe(V)O states may be involved in unusual reactivities of Cpd I species (Pan, Z. Z.; Wang, Q.; Sheng, X.; Horner, J. H.; Newcomb, M. J. Am. Chem. Soc. 2009, 131, 2621-2628) and (b) the DFT/MM results which show that the pentaradicaloid states have intrinsically low barriers for H-abstraction (Altun, A.; Shaik, S.; Thiel, W. J. Am. Chem. Soc. 2007, 129, 8978-8987). The application of CASPT2/MM to high valent transition metal states like the perferryl are far from being trivial, and the experience and insight gained in this study are expected to be helpful for future successful application of this type of method to resolve key issues in P450 reactivity.

Entities:  

Year:  2010        PMID: 26613318     DOI: 10.1021/ct9006234

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  7 in total

1.  A GGA+U approach to effective electronic correlations in thiolate-ligated iron-oxo (IV) porphyrin.

Authors:  Justin E Elenewski; John C Hackett
Journal:  J Chem Phys       Date:  2012-09-28       Impact factor: 3.488

2.  Lessons on O2 and NO bonding to heme from ab initio multireference/multiconfiguration and DFT calculations.

Authors:  Sason Shaik; Hui Chen
Journal:  J Biol Inorg Chem       Date:  2011-03-04       Impact factor: 3.358

3.  Deciphering the origin of million-fold reactivity observed for the open core diiron [HO-FeIII-O-FeIV[double bond, length as m-dash]O]2+ species towards C-H bond activation: role of spin-states, spin-coupling, and spin-cooperation.

Authors:  Mursaleem Ansari; Dhurairajan Senthilnathan; Gopalan Rajaraman
Journal:  Chem Sci       Date:  2020-06-18       Impact factor: 9.825

4.  Cytochrome P450 compound I in the plane wave pseudopotential framework: GGA electronic and geometric structure of thiolate-ligated iron(IV)-oxo porphyrin.

Authors:  Justin E Elenewski; John C Hackett
Journal:  J Comput Chem       Date:  2013-05-14       Impact factor: 3.376

Review 5.  Insights into enzymatic halogenation from computational studies.

Authors:  Hans M Senn
Journal:  Front Chem       Date:  2014-11-11       Impact factor: 5.221

6.  Reliably assessing the electronic structure of cytochrome P450 on today's classical computers and tomorrow's quantum computers.

Authors:  Joshua J Goings; Alec White; Joonho Lee; Christofer S Tautermann; Matthias Degroote; Craig Gidney; Toru Shiozaki; Ryan Babbush; Nicholas C Rubin
Journal:  Proc Natl Acad Sci U S A       Date:  2022-09-12       Impact factor: 12.779

Review 7.  Applications of density functional theory to iron-containing molecules of bioinorganic interest.

Authors:  Hajime Hirao; Nandun Thellamurege; Xi Zhang
Journal:  Front Chem       Date:  2014-04-29       Impact factor: 5.221

  7 in total

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