Literature DB >> 26613198

Quantifying plant phenotypes with isotopic labeling & metabolic flux analysis.

Doug K Allen1.   

Abstract

Analyses of metabolic flux using stable isotopes in plants have traditionally been restricted to tissues with presumed homogeneous cell populations and long metabolic steady states such as developing seeds, cell suspensions, or cultured roots and root tips. It is now possible to describe these and other metabolically more dynamic tissues such as leaves in greater detail using novel methods in mass spectrometry, isotope labeling strategies, and transient labeling-based flux analyses. Such studies are necessary for a systems level description of plant function that more closely represents biological reality, and provides insights into the genes that will need to be modified as natural resources become ever more limited and environments change. Published by Elsevier Ltd.

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Year:  2015        PMID: 26613198     DOI: 10.1016/j.copbio.2015.10.002

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  19 in total

1.  Genome-Scale Fluxome of Synechococcus elongatus UTEX 2973 Using Transient 13C-Labeling Data.

Authors:  John I Hendry; Saratram Gopalakrishnan; Justin Ungerer; Himadri B Pakrasi; Yinjie J Tang; Costas D Maranas
Journal:  Plant Physiol       Date:  2018-12-14       Impact factor: 8.340

2.  Phospholipase Dζ Enhances Diacylglycerol Flux into Triacylglycerol.

Authors:  Wenyu Yang; Geliang Wang; Jia Li; Philip D Bates; Xuemin Wang; Doug K Allen
Journal:  Plant Physiol       Date:  2017-03-21       Impact factor: 8.340

3.  Sphingolipid Long-Chain Base Phosphate Degradation Can Be a Rate-Limiting Step in Long-Chain Base Homeostasis.

Authors:  Benjamin Lambour; René Glenz; Carmen Forner; Markus Krischke; Martin J Mueller; Agnes Fekete; Frank Waller
Journal:  Front Plant Sci       Date:  2022-06-15       Impact factor: 6.627

4.  A General Method for Quantification and Discovery of Acyl Groups Attached to Acyl Carrier Proteins in Fatty Acid Metabolism Using LC-MS/MS.

Authors:  Jeong-Won Nam; Lauren M Jenkins; Jia Li; Bradley S Evans; Jan G Jaworski; Doug K Allen
Journal:  Plant Cell       Date:  2020-02-14       Impact factor: 11.277

5.  Reorganization of Acyl Flux through the Lipid Metabolic Network in Oil-Accumulating Tobacco Leaves.

Authors:  Xue-Rong Zhou; Sajina Bhandari; Brandon S Johnson; Hari Kiran Kotapati; Doug K Allen; Thomas Vanhercke; Philip D Bates
Journal:  Plant Physiol       Date:  2019-12-02       Impact factor: 8.340

Review 6.  Tracing metabolic flux through time and space with isotope labeling experiments.

Authors:  Doug K Allen; Jamey D Young
Journal:  Curr Opin Biotechnol       Date:  2019-12-20       Impact factor: 9.740

7.  The Contribution of Metabolomics to Systems Biology: Current Applications Bridging Genotype and Phenotype in Plant Science.

Authors:  Marina C M Martins; Valeria Mafra; Carolina C Monte-Bello; Camila Caldana
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

8.  Isotopic labelling reveals the efficient adaptation of wheat root TCA cycle flux modes to match carbon demand under ammonium nutrition.

Authors:  Izargi Vega-Mas; Caroline Cukier; Inmaculada Coleto; Carmen González-Murua; Anis M Limami; M Begoña González-Moro; Daniel Marino
Journal:  Sci Rep       Date:  2019-06-20       Impact factor: 4.379

9.  Temporal changes in metabolism late in seed development affect biomass composition.

Authors:  Shrikaar Kambhampati; Jose A Aznar-Moreno; Sally R Bailey; Jennifer J Arp; Kevin L Chu; Kristin D Bilyeu; Timothy P Durrett; Doug K Allen
Journal:  Plant Physiol       Date:  2021-06-11       Impact factor: 8.340

10.  Sink/Source Balance of Leaves Influences Amino Acid Pools and Their Associated Metabolic Fluxes in Winter Oilseed Rape (Brassica napus L.).

Authors:  Younès Dellero; Maud Heuillet; Nathalie Marnet; Floriant Bellvert; Pierre Millard; Alain Bouchereau
Journal:  Metabolites       Date:  2020-04-13
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