Literature DB >> 33693938

Temporal changes in metabolism late in seed development affect biomass composition.

Shrikaar Kambhampati1, Jose A Aznar-Moreno2, Sally R Bailey3, Jennifer J Arp1, Kevin L Chu1,3,4, Kristin D Bilyeu5, Timothy P Durrett2, Doug K Allen1,3.   

Abstract

The negative association between protein and oil production in soybean (Glycine max) seed is well-documented. However, this inverse relationship is based primarily on the composition of mature seed, which reflects the cumulative result of events over the course of soybean seed development and therefore does not convey information specific to metabolic fluctuations during developmental growth regimes. In this study, we assessed maternal nutrient supply via measurement of seed coat exudates and metabolite levels within the cotyledon throughout development to identify trends in the accumulation of central carbon and nitrogen metabolic intermediates. Active metabolic activity during late seed development was probed through transient labeling with 13C substrates. The results indicated: (1) a drop in lipid contents during seed maturation with a concomitant increase in carbohydrates, (2) a transition from seed filling to maturation phases characterized by quantitatively balanced changes in carbon use and CO2 release, (3) changes in measured carbon and nitrogen resources supplied maternally throughout development, (4) 13C metabolite production through gluconeogenic steps for sustained carbohydrate accumulation as the maternal nutrient supply diminishes, and (5) oligosaccharide biosynthesis within the seed coat during the maturation phase. These results highlight temporal engineering targets for altering final biomass composition to increase the value of soybeans and a path to breaking the inverse correlation between seed protein and oil content. Published by Oxford University Press on behalf of American Society of Plant Biologists 2021. This work is written by US Government employees and is in the public domain in the US.

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Year:  2021        PMID: 33693938      PMCID: PMC8195533          DOI: 10.1093/plphys/kiab116

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  57 in total

1.  Arabidopsis seed development and germination is associated with temporally distinct metabolic switches.

Authors:  Aaron Fait; Ruthie Angelovici; Hadar Less; Itzhak Ohad; Ewa Urbanczyk-Wochniak; Alisdair R Fernie; Gad Galili
Journal:  Plant Physiol       Date:  2006-09-08       Impact factor: 8.340

Review 2.  Biogenesis and functions of lipid droplets in plants: Thematic Review Series: Lipid Droplet Synthesis and Metabolism: from Yeast to Man.

Authors:  Kent D Chapman; John M Dyer; Robert T Mullen
Journal:  J Lipid Res       Date:  2011-11-01       Impact factor: 5.922

3.  Energy status and its control on embryogenesis of legumes. Embryo photosynthesis contributes to oxygen supply and is coupled to biosynthetic fluxes.

Authors:  Hardy Rolletschek; Hans Weber; Ljudmilla Borisjuk
Journal:  Plant Physiol       Date:  2003-07       Impact factor: 8.340

4.  Quantification of carbon fluxes through the tricarboxylic acid cycle in early germinating lettuce embryos.

Authors:  C Salon; P Raymond; A Pradet
Journal:  J Biol Chem       Date:  1988-09-05       Impact factor: 5.157

5.  High-value oils from plants.

Authors:  John M Dyer; Sten Stymne; Allan G Green; Anders S Carlsson
Journal:  Plant J       Date:  2008-05       Impact factor: 6.417

6.  Comprehensive and accurate tracking of carbon origin of LC-tandem mass spectrometry collisional fragments for 13C-MFA.

Authors:  Jannick Kappelmann; Bianca Klein; Petra Geilenkirchen; Stephan Noack
Journal:  Anal Bioanal Chem       Date:  2017-01-23       Impact factor: 4.142

7.  Correcting for natural isotope abundance and tracer impurity in MS-, MS/MS- and high-resolution-multiple-tracer-data from stable isotope labeling experiments with IsoCorrectoR.

Authors:  Paul Heinrich; Christian Kohler; Lisa Ellmann; Paul Kuerner; Rainer Spang; Peter J Oefner; Katja Dettmer
Journal:  Sci Rep       Date:  2018-12-17       Impact factor: 4.379

8.  Application of Stable Isotope Tracing to Elucidate Metabolic Dynamics During Yarrowia lipolytica α-Ionone Fermentation.

Authors:  Jeffrey J Czajka; Shrikaar Kambhampati; Yinjie J Tang; Yechun Wang; Doug K Allen
Journal:  iScience       Date:  2020-01-22

9.  Molecular-assisted breeding for improved carbohydrate profiles in soybean seed.

Authors:  Katherine B Hagely; Hyun Jo; Jeong-Hwa Kim; Karen A Hudson; Kristin Bilyeu
Journal:  Theor Appl Genet       Date:  2020-01-20       Impact factor: 5.699

10.  Using RNA-Seq to profile soybean seed development from fertilization to maturity.

Authors:  Sarah I Jones; Lila O Vodkin
Journal:  PLoS One       Date:  2013-03-15       Impact factor: 3.240

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  2 in total

1.  Comparative Metabolic Analysis Reveals a Metabolic Switch in Mature, Hydrated, and Germinated Pollen in Arabidopsis thaliana.

Authors:  Jiang Wang; Shrikaar Kambhampati; Doug K Allen; Li-Qing Chen
Journal:  Front Plant Sci       Date:  2022-05-18       Impact factor: 6.627

2.  Suppression of SDP1 Improves Soybean Seed Composition by Increasing Oil and Reducing Undigestible Oligosaccharides.

Authors:  Jose A Aznar-Moreno; Thiya Mukherjee; Stewart A Morley; Dechassa Duressa; Shrikaar Kambhampati; Kevin L Chu; Somnath Koley; Doug K Allen; Timothy P Durrett
Journal:  Front Plant Sci       Date:  2022-03-23       Impact factor: 5.753

  2 in total

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