| Literature DB >> 26612295 |
Zhi-Jing Sun, Lan Zhu1, Jing-He Lang, Zhao Wang, Shuo Liang.
Abstract
BACKGROUND: Pelvic organ prolapse (POP) is a major health problem in adult women that involves many factors. No proteomic analysis has been conducted exclusively in POP patients. This study aimed to identify the differential expression of proteins that may be involved in POP by proteomic analysis.Entities:
Mesh:
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Year: 2015 PMID: 26612295 PMCID: PMC4794882 DOI: 10.4103/0366-6999.170262
Source DB: PubMed Journal: Chin Med J (Engl) ISSN: 0366-6999 Impact factor: 2.628
The DIGE label method for experimental and control samples
| Items | Cy3 | Cy5 | Cy2 |
|---|---|---|---|
| Gel 1 | A1 | B1 | Pool |
| Gel 2 | B2 | A2 | Pool |
| Gel 3 | A3 | B3 | Pool |
| Gel 4 | B4 | A4 | Pool |
| Gel 5 | A5 | B5 | Pool |
A: Control sample; B: Experimental sample; Pool: The pool of all control and experimental samples; DIGE: Difference gel electrophoresis.
Primers used for RT-PCR
| Primers | Sequences (5’-3’) | Size (bp) |
|---|---|---|
| ETFα | F: GAG GAA CTG ACA CCA TTG AT | 20 |
| R: GAAATCGGGGCAACCTCAAG | 20 | |
| ACTG2 | F: GAG GCT CCC CTA AAT CCC AAG | 21 |
| R: GAATCCAGGACGATGCCTG | 19 | |
| TAGLN | F: GTG CAG TCC AAA ATC GAG AAG | 21 |
| R: CTT GCT CAG AAT CAC GCC AT | 20 | |
| CFL1 | F: GAT GCT GCC AGA TAA GGA CTG | 21 |
| R: GCA ATT CAT GCT TGA TCC CTG | 21 | |
| MYL6 | F: AAG ACC AGA CCG CAG AGT TC | 20 |
| R: TCC AGC ACC TTC ACA TTC ATC | 21 | |
| LGALS1 | F: TCG CCA GCA ACC TGA ATC TC | 20 |
| R: CGTCCTTGCTGTTGCACAC | 19 | |
| PPIA | F: CCA CCG TGT TCT TCG ACA TT | 20 |
| R: CACCACCCTGACACATAAAC | 20 | |
| APOA | F: GCT CAA AGA CAG CGG CAG | 18 |
| R: GCCTTCACCTCCTCCAG | 17 | |
| β-actin | F: GAA GTG TGA CGT GGA CAT CCG | 21 |
| R: GCC TAG AAG CAT TTG CGG TG | 20 |
ETFα: Electron transfer flavoprotein subunit alpha, mitochondrial; RT-PCR: Real-time polymerase chain reaction. F: Forward; R: Reverse.
Demographic characteristics of women with and without POP
| Characteristics | POP group ( | Control group ( | |
|---|---|---|---|
| Age (years) | 67.3 ± 7.8 | 67.5 ± 8.8 | 1.00 |
| Menopausal (years) | 13.6 ± 10.8 | 15.8 ± 11.3 | 0.76 |
| BMI (kg/m2) | 24.4 ± 2.1 | 23.9 ± 3.0 | 0.76 |
| Vaginal parity | 2.6 ± 1.0 | 2.8 ± 0.8 | 0.83 |
BMI: Body mass index; POP: Pelvic organ prolapse.
Figure 1Two-dimensional electrophoresis images of the uterosacral ligament (24-cm isoelectric focusing, pH 3–10 NL, 12% sodium dodecyl sulfate polyacrylamide gel electrophoresis). Differentially expressed proteins are indicated by red circles. (a) Control group, (b) pelvic organ prolapse group.
Differentially expressed proteins in USL samples obtained from women with POP and from controls
| Master no. | Av.Ratio (B/A) | NCBI index | Protein name |
|---|---|---|---|
| 850 | –1.6 | gi|2781202 | Electron transfer flavoprotein subunit alpha, mitochondrial |
| 959 | –1.7 | gi|90108664 | Apolipoprotein A-I |
| 1049 | –1.52 | gi|4501889 | Smooth muscle gamma-actin |
| 1056 | –2.34 | g i|48255905 | Transgelin |
| 1070 | –2.02 | gi|5031635 | Cofilin-1 |
| 1081 | –2.27 | gi|1633054 | Cyclophilin A |
| 1101 | –1.95 | gi|119617307 | Myosin, light polypeptide 6, alkali |
| 1125 | –4.06 | gi|42542978 | Galectin-1 |
Master no.: The number of protein spots in the computer; Av. Ratio: Abundance ratio of protein spots (POP group/control group); NCBI Index: Protein sequence number in the NCBInr; POP: Pelvic organ prolapse; USL: Uterosacral ligament.
USL mRNA expression in women with POP and in controls
| Characteristics | POP group ( | Control group ( | |
|---|---|---|---|
| ETFα* | 0.54 ± 0.17 | 1.31 ± 0.54 | 0.014 |
| Apolipoprotein A-I | 0.44 ± 0.16 | 1.15 ± 0.31 | <0.01 |
| Smooth muscle gamma-actin | 0.46 ± 0.18 | 1.16 ± 0.25 | <0.01 |
| Transgelin | 0.44 ± 0.23 | 1.11 ± 0.26 | <0.01 |
| Cofilin-1 | 0.49 ± 0.16 | 1.28 ± 0.26 | <0.01 |
| Cyclophilin A | 0.48 ± 0.23 | 1.47 ± 0.29 | <0.01 |
| Myosin | 0.52 ± 0.20 | 1.28 ± 0.26 | <0.01 |
| Galectin-1 | 0.55 ± 0.20 | 1.31 ± 0.21 | <0.01 |
*ETFα: Electron transfer flavoprotein subunit alpha, mitochondrial; POP: Pelvic organ prolapse; USL: Uterosacral ligament.