Literature DB >> 26611145

Paludisphaera borealis gen. nov., sp. nov., a hydrolytic planctomycete from northern wetlands, and proposal of Isosphaeraceae fam. nov.

Irina S Kulichevskaya1, Anastasia A Ivanova1, Natalia E Suzina2, W Irene C Rijpstra3, Jaap S Sinninghe Damsté3,4, Svetlana N Dedysh1.   

Abstract

Two isolates of aerobic, budding, pink-pigmented bacteria, designated strains PX4T and PT1, were isolated from a boreal Sphagnum peat bog and a forested tundra wetland. Cells of these strains were non-motile spheres that occurred singly or in short chains. Novel isolates were capable of growth at pH values between 3.5 and 6.5 (optimum at pH 5.0-5.5) and at temperatures between 6 and 30 °C (optimum at 15-25 °C). Most sugars and a number of polysaccharides including pectin, xylan, lichenin and Phytagel were used as growth substrates. The major fatty acids were C16 : 0, C18 : 1ω9 and C18 : 0; the major polar lipids were phosphocholine and trimethylornithine. The quinone was menaquinone-6, and the G+C content of the DNA was 66 mol%. Strains PX4T and PT1 were members of the order Planctomycetales and displayed 93-94 % 16S rRNA gene sequence similarity to Aquisphaera giovannonii, 91-92 % to species of the genus Singulisphaera and 90-91 % to Isosphaera pallida. The two novel strains, however, differed from members of these genera by cell morphology, substrate utilization pattern and a number of physiological characteristics. Based on these data, the novel isolates should be considered as representing a novel genus and species of planctomycetes, for which the name Paludisphaera borealis gen. nov., sp. nov., is proposed. The type strain is PX4T ( = DSM 28747T = VKM B-2904T). We also suggest the establishment of a novel family, Isosphaeraceae fam. nov., to accommodate stalk-free planctomycetes with spherical cells, which can be assembled in short chains, long filaments or shapeless aggregates. This family includes the genera Isosphaera, Aquisphaera, Singulisphaera and Paludisphaera.

Entities:  

Year:  2015        PMID: 26611145     DOI: 10.1099/ijsem.0.000799

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  10 in total

Review 1.  The Planctomycetia: an overview of the currently largest class within the phylum Planctomycetes.

Authors:  Inês Rosado Vitorino; Olga Maria Lage
Journal:  Antonie Van Leeuwenhoek       Date:  2022-01-17       Impact factor: 2.271

2.  Paludisphaera soli sp. nov., a new member of the family Isosphaeraceae isolated from high altitude soil in the Western Himalaya.

Authors:  Rishabh Kaushik; Meesha Sharma; Kumar Gaurav; U Jagadeeshwari; A Shabbir; Ch Sasikala; Ch V Ramana; Maharaj K Pandit
Journal:  Antonie Van Leeuwenhoek       Date:  2020-09-16       Impact factor: 2.271

3.  High Diversity of Planctomycetes in Soils of Two Lichen-Dominated Sub-Arctic Ecosystems of Northwestern Siberia.

Authors:  Anastasia A Ivanova; Irina S Kulichevskaya; Alexander Y Merkel; Stepan V Toshchakov; Svetlana N Dedysh
Journal:  Front Microbiol       Date:  2016-12-22       Impact factor: 5.640

4.  Comparative Genomics of Four Isosphaeraceae Planctomycetes: A Common Pool of Plasmids and Glycoside Hydrolase Genes Shared by Paludisphaera borealis PX4T, Isosphaera pallida IS1BT, Singulisphaera acidiphila DSM 18658T, and Strain SH-PL62.

Authors:  Anastasia A Ivanova; Daniil G Naumoff; Kirill K Miroshnikov; Werner Liesack; Svetlana N Dedysh
Journal:  Front Microbiol       Date:  2017-03-16       Impact factor: 5.640

5.  Tuwongella immobilis gen. nov., sp. nov., a novel non-motile bacterium within the phylum Planctomycetes.

Authors:  Christian Seeger; Margaret K Butler; Benjamin Yee; Mayank Mahajan; John A Fuerst; Siv G E Andersson
Journal:  Int J Syst Evol Microbiol       Date:  2017-10-31       Impact factor: 2.747

6.  Extreme Geochemical Conditions and Dispersal Limitation Retard Primary Succession of Microbial Communities in Gold Tailings.

Authors:  Talitha C Santini; Maija Raudsepp; Jessica Hamilton; Jasmine Nunn
Journal:  Front Microbiol       Date:  2018-11-28       Impact factor: 5.640

Review 7.  Planctomycetes as Host-Associated Bacteria: A Perspective That Holds Promise for Their Future Isolations, by Mimicking Their Native Environmental Niches in Clinical Microbiology Laboratories.

Authors:  Odilon D Kaboré; Sylvain Godreuil; Michel Drancourt
Journal:  Front Cell Infect Microbiol       Date:  2020-11-30       Impact factor: 5.293

Review 8.  Trimethylornithine Membrane Lipids: Discovered in Planctomycetes and Identified in Diverse Environments.

Authors:  Eli K Moore
Journal:  Metabolites       Date:  2021-01-12

9.  Limited effect of thermal pruning on wild blueberry crop and its root-associated microbiota.

Authors:  Simon Morvan; Maxime C Paré; Anne Schmitt; Jean Lafond; Mohamed Hijri
Journal:  Front Plant Sci       Date:  2022-08-04       Impact factor: 6.627

10.  Microbial features of mature and abandoned soils in refractory clay deposits.

Authors:  Aleksei Zverev; Anastasiia Kimeklis; Arina Kichko; Grigory Gladkov; Evgeny Andronov; Evgeny Abakumov
Journal:  BMC Microbiol       Date:  2022-10-04       Impact factor: 4.465

  10 in total

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