Literature DB >> 26605574

Dynamic Electron Correlation Effects on the Ground State Potential Energy Surface of a Retinal Chromophore Model.

Samer Gozem1, Mark Huntress1, Igor Schapiro1, Roland Lindh2, Alexander A Granovsky3, Celestino Angeli4, Massimo Olivucci1,5.   

Abstract

The ground state potential energy surface of the retinal chromophore of visual pigments (e.g., bovine rhodopsin) features a low-lying conical intersection surrounded by regions with variable charge-transfer and diradical electronic structures. This implies that dynamic electron correlation may have a large effect on the shape of the force fields driving its reactivity. To investigate this effect, we focus on mapping the potential energy for three paths located along the ground state CASSCF potential energy surface of the penta-2,4-dieniminium cation taken as a minimal model of the retinal chromophore. The first path spans the bond length alternation coordinate and intercepts a conical intersection point. The other two are minimum energy paths along two distinct but kinetically competitive thermal isomerization coordinates. We show that the effect of introducing the missing dynamic electron correlation variationally (with MRCISD) and perturbatively (with the CASPT2, NEVPT2, and XMCQDPT2 methods) leads, invariably, to a stabilization of the regions with charge transfer character and to a significant reshaping of the reference CASSCF potential energy surface and suggesting a change in the dominating isomerization mechanism. The possible impact of such a correction on the photoisomerization of the retinal chromophore is discussed.

Entities:  

Year:  2012        PMID: 26605574     DOI: 10.1021/ct3003139

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  14 in total

1.  Molecular bases for the selection of the chromophore of animal rhodopsins.

Authors:  Hoi Ling Luk; Federico Melaccio; Silvia Rinaldi; Samer Gozem; Massimo Olivucci
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-25       Impact factor: 11.205

2.  Action and Ion Mobility Spectroscopy of a Shortened Retinal Derivative.

Authors:  Lihi Musbat; Shirrel Assis; Jonathan M Dilger; Tarick J El-Baba; Daniel R Fuller; Jeppe Langeland Knudsen; Hjalte V Kiefer; Amiram Hirshfeld; Noga Friedman; Lars H Andersen; Mordechai Sheves; David E Clemmer; Yoni Toker
Journal:  J Am Soc Mass Spectrom       Date:  2018-07-30       Impact factor: 3.109

3.  Z-isomerization of retinoids through combination of monochromatic photoisomerization and metal catalysis.

Authors:  Shirin Kahremany; Christopher Lane Sander; Gregory P Tochtrop; Adam Kubas; Krzysztof Palczewski
Journal:  Org Biomol Chem       Date:  2019-08-28       Impact factor: 3.876

4.  Two-State, Three-Mode Parametrization of the Force Field of a Retinal Chromophore Model.

Authors:  Emanuele Marsili; Marwa H Farag; Xuchun Yang; Luca De Vico; Massimo Olivucci
Journal:  J Phys Chem A       Date:  2019-02-26       Impact factor: 2.781

5.  Assessment of MC-PDFT Excitation Energies for a Set of QM/MM Models of Rhodopsins.

Authors:  María Del Carmen Marín; Luca De Vico; Sijia S Dong; Laura Gagliardi; Donald G Truhlar; Massimo Olivucci
Journal:  J Chem Theory Comput       Date:  2019-02-20       Impact factor: 6.006

6.  QM/MM Investigation of the Spectroscopic Properties of the Fluorophore of Bacterial Luciferase.

Authors:  Germano Giuliani; Federico Melaccio; Samer Gozem; Andrea Cappelli; Massimo Olivucci
Journal:  J Chem Theory Comput       Date:  2021-01-15       Impact factor: 6.578

7.  Quantum Monte Carlo Treatment of the Charge Transfer and Diradical Electronic Character in a Retinal Chromophore Minimal Model.

Authors:  Andrea Zen; Emanuele Coccia; Samer Gozem; Massimo Olivucci; Leonardo Guidoni
Journal:  J Chem Theory Comput       Date:  2015-03-10       Impact factor: 6.006

8.  Comparison of the isomerization mechanisms of human melanopsin and invertebrate and vertebrate rhodopsins.

Authors:  Silvia Rinaldi; Federico Melaccio; Samer Gozem; Francesca Fanelli; Massimo Olivucci
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-21       Impact factor: 11.205

9.  Nonadiabatic photodynamics of a retinal model in polar and nonpolar environment.

Authors:  Matthias Ruckenbauer; Mario Barbatti; Thomas Müller; Hans Lischka
Journal:  J Phys Chem A       Date:  2013-03-21       Impact factor: 2.781

10.  A Static Picture of the Relaxation and Intersystem Crossing Mechanisms of Photoexcited 2-Thiouracil.

Authors:  Sebastian Mai; Philipp Marquetand; Leticia González
Journal:  J Phys Chem A       Date:  2015-08-28       Impact factor: 2.781

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