Literature DB >> 26599498

The Hierarchy of Transcriptional Activation: From Enhancer to Promoter.

Douglas Vernimmen1, Wendy A Bickmore2.   

Abstract

Regulatory elements (enhancers) that are remote from promoters play a critical role in the spatial, temporal, and physiological control of gene expression. Studies on specific loci, together with genome-wide approaches, suggest that there may be many common mechanisms involved in enhancer-promoter communication. Here, we discuss the multiprotein complexes that are recruited to enhancers and the hierarchy of events taking place between regulatory elements and promoters.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2015        PMID: 26599498     DOI: 10.1016/j.tig.2015.10.004

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  60 in total

Review 1.  Phase Separation and Transcription Regulation: Are Super-Enhancers and Locus Control Regions Primary Sites of Transcription Complex Assembly?

Authors:  Aishwarya Gurumurthy; Yong Shen; Eliot M Gunn; Jörg Bungert
Journal:  Bioessays       Date:  2018-11-30       Impact factor: 4.345

2.  A sequence level model of an intact locus predicts the location and function of nonadditive enhancers.

Authors:  Kenneth A Barr; John Reinitz
Journal:  PLoS One       Date:  2017-07-17       Impact factor: 3.240

3.  LEC1 sequentially regulates the transcription of genes involved in diverse developmental processes during seed development.

Authors:  Julie M Pelletier; Raymond W Kwong; Soomin Park; Brandon H Le; Russell Baden; Alexandro Cagliari; Meryl Hashimoto; Matthew D Munoz; Robert L Fischer; Robert B Goldberg; John J Harada
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-24       Impact factor: 11.205

4.  Bicoid-Dependent Activation of the Target Gene hunchback Requires a Two-Motif Sequence Code in a Specific Basal Promoter.

Authors:  Jia Ling; Kristaley Yui Umezawa; Theresa Scott; Stephen Small
Journal:  Mol Cell       Date:  2019-08-08       Impact factor: 17.970

Review 5.  Advances in targeting 'undruggable' transcription factors with small molecules.

Authors:  Matthew J Henley; Angela N Koehler
Journal:  Nat Rev Drug Discov       Date:  2021-05-18       Impact factor: 84.694

6.  Intron DNA Sequences Can Be More Important Than the Proximal Promoter in Determining the Site of Transcript Initiation.

Authors:  Jenna E Gallegos; Alan B Rose
Journal:  Plant Cell       Date:  2017-04-03       Impact factor: 11.277

7.  Chromatin Association of Gcn4 Is Limited by Post-translational Modifications Triggered by its DNA-Binding in Saccharomyces cerevisiae.

Authors:  Akhi Akhter; Emanuel Rosonina
Journal:  Genetics       Date:  2016-10-21       Impact factor: 4.562

Review 8.  Druggable Transcriptional Networks in the Human Neurogenic Epigenome.

Authors:  Gerald A Higgins; Aaron M Williams; Alex S Ade; Hasan B Alam; Brian D Athey
Journal:  Pharmacol Rev       Date:  2019-10       Impact factor: 25.468

Review 9.  Chromosome Conformation Capture and Beyond: Toward an Integrative View of Chromosome Structure and Function.

Authors:  Rachel Patton McCord; Noam Kaplan; Luca Giorgetti
Journal:  Mol Cell       Date:  2020-01-27       Impact factor: 17.970

10.  Single-cell systems biology: probing the basic unit of information flow.

Authors:  Simona Patange; Michelle Girvan; Daniel R Larson
Journal:  Curr Opin Syst Biol       Date:  2017-12-06
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