| Literature DB >> 26594635 |
Stephen R Pfohl1, Martin T Halicek1, Cassie S Mitchell1.
Abstract
BACKGROUND: The SOD1 G93A mouse model of amyotrophic lateral sclerosis (ALS) is the most frequently used model to examine ALS pathophysiology. There is a lack of homogeneity in usage of the SOD1 G93A mouse, including differences in genetic background and gender, which could confound the field's results.Entities:
Keywords: ALS; Amyotrophic Lateral Sclerosis; Lou Gehrig’s disease; forelimb tremor; hindlimb tremor; motoneuron disease; rotarod; transgenic mice
Year: 2015 PMID: 26594635 PMCID: PMC4652798 DOI: 10.3233/JND-140068
Source DB: PubMed Journal: J Neuromuscul Dis
Data source and sample information
| Category | Articles | Groups | Mice | References |
| B6SJL, Female | 15 | 17 | 203 | [ |
| B6SJL, Male | 14 | 16 | 192 | [ |
| B6SJL, Mixed | 43 | 58 | 909 | [ |
| C57BL/6, Female | 9 | 11 | 173 | [ |
| C57BL/6, Male | 14 | 21 | 294 | [ |
| C57BL/6, Mixed | 22 | 27 | 472 | [ |
| B6SJL, General/Other | 30 | 45 | 628 | [ |
| B6SJL, Hindlimb Tremor | 5 | 9 | 163 | [ |
| B6SJL, Non-Hindlimb Tremor | 6 | 8 | 171 | [ |
| B6SJL, Rotarod Decline | 20 | 29 | 342 | [ |
| C57BL/6, General/Other | 16 | 26 | 358 | [ |
| C57BL/6, Hindlimb Tremor | 3 | 8 | 93 | [ |
| C57BL/6, Non-Hindlimb Tremor | 3 | 6 | 153 | [ |
| C57BL/6, Rotarod Decline | 14 | 19 | 335 | [ |
Number of articles, independent groups, and mice that relate to each category of interest. Categories are named first by the genetic background strain followed by either a sex group label or a label for the onset determination category. Articles may be counted in multiple categories if that article contains information for multiple groups.
Fig.1Representation of raw data from literature. The (A) mean onset, (C) mean survival, (E), mean disease duration for each independent group of mice was plotted with a size proportional to the sample size of that group. Data was stratified by both the sex of the group and genetic background strain. The (B) mean onset, (D) mean survival, and (F) mean disease duration were aggregated across groups and the distributions weighted by group sample size and results accumulated in histograms.
Fig.2The effect of G93A mouse genetic background strain and sex on the age at disease onset. (A) Linear regression was performed with the mean age at onset for each group modeled as the response with mouse sex and genetic background factored as categorical predictors with full interaction. Data represents the predicted response ± SEM computed at values of the interaction term corresponding to each category. Observations were weighted on the basis of sample size. *p < 0.05 after Bonferroni correction. (B) The time until onset was modeled as Cox proportional hazards with mouse sex and genetic background factored as categorical predictors with full interaction. Data represents the survival curve for onset predicted by the Cox model for combinations of categorical predictors. Observations were weighted as frequencies given by the group sample size.
Fig.3The variation in onset times by onset determination criteria and genetic background strain. Linear regression was performed with the mean age at onset for each group modeled as the response and the onset definition category and genetic background factored as categorical predictors with full interaction. Data represents the predicted response ± SEM computed at values of the categorical interaction term corresponding to each category. Observations were weighted on the basis of sample size. *p < 0.05 for the comparison between the marked column and the “General” group within the strain.
Fig.4The effect of G93A mouse genetic background strain and sex on the age at death. (A) Linear regression was performed with the mean age at death for each group modeled as the response with mouse sex and genetic background factored as categorical predictors and onset included as a continuous predictor with full interaction between the terms. Data represents the predicted response ± SEM computed at values of the categorical interaction term corresponding to each category at the group-specific mean onset. Observations were weighted on the basis of sample size. *p < 0.05 after Bonferroni correction. (B) The age at death was modeled as Cox proportional hazards with mouse sex and genetic background factored as categorical predictors with full interaction. Onset was included as an independent continuous predictor. Data represents the survival curve predicted by the Cox model for combinations of categorical predictors. Observations were weighted as frequencies given by the group sample size.
Fig.5The effect of G93A mouse genetic background strain and sex on the duration of disease. (A) Linear regression was performed with the disease duration for each group modeled as the response with mouse sex and genetic background factored as categorical predictors and onset included as a continuous predictor with full interaction between the terms. Data represents the predicted response ± SEM computed at values of the categorical interaction term corresponding to each category at the group-specific mean onset. Observations were weighted on the basis of sample size. *p < 0.05 after Bonferroni correction. (B) The disease duration was modeled as Cox proportional hazards with mouse sex and genetic background factored as categorical predictors with full interaction. Onset was included as an independent continuous predictor. Data represents the survival curve predicted by the Cox model for combinations of categorical predictors. Observations were weighted as frequencies given by the group sample size.