| Literature DB >> 26594584 |
M Umadevi1, Potharaju Raju2, R Yamuna3, Arasambattu K Mohanakrishnan2, G Chakkaravarthi4.
Abstract
In the title compound, C23H18N2O5S, the phenyl and benzene rings subtend dihedral angles of 78.18 (10) and 30.18 (9)°, respectively, with the indole ring system (r.m.s. deviation = 0.022 Å). The crystal structure features weak C-H⋯O and C-H⋯π inter-actions, which link the mol-ecules into a three-dimensional network.Entities:
Keywords: C—H⋯π interactions; crystal structure; hydrogen bonding; indole
Year: 2015 PMID: 26594584 PMCID: PMC4645035 DOI: 10.1107/S2056989015020162
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C23H18N2O5S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 7714 reflections |
| θ = 2.4–28.3° | |
| µ = 0.20 mm−1 | |
| β = 106.349 (2)° | Block, colourless |
| 0.26 × 0.24 × 0.20 mm | |
| Bruker Kappa APEXII CCD diffractometer | 6149 independent reflections |
| Radiation source: fine-focus sealed tube | 4060 reflections with |
| Graphite monochromator | |
| ω and φ scan | θmax = 31.6°, θmin = 2.4° |
| Absorption correction: multi-scan ( | |
| 29555 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 6149 reflections | (Δ/σ)max < 0.001 |
| 280 parameters | Δρmax = 0.35 e Å−3 |
| 3 restraints | Δρmin = −0.32 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| C1 | 0.7579 (2) | −0.01858 (14) | 0.38658 (13) | 0.0384 (4) | |
| C2 | 0.6908 (3) | −0.05928 (17) | 0.44691 (16) | 0.0514 (6) | |
| H2 | 0.6403 | −0.1120 | 0.4318 | 0.062* | |
| C3 | 0.7005 (3) | −0.0197 (2) | 0.53057 (17) | 0.0663 (8) | |
| H3 | 0.6565 | −0.0460 | 0.5724 | 0.080* | |
| C4 | 0.7746 (3) | 0.0580 (2) | 0.55179 (18) | 0.0690 (8) | |
| H4 | 0.7801 | 0.0842 | 0.6079 | 0.083* | |
| C5 | 0.8408 (3) | 0.09752 (19) | 0.49126 (18) | 0.0655 (7) | |
| H5 | 0.8907 | 0.1504 | 0.5065 | 0.079* | |
| C6 | 0.8337 (3) | 0.05935 (16) | 0.40815 (16) | 0.0527 (6) | |
| H6 | 0.8793 | 0.0857 | 0.3671 | 0.063* | |
| C7 | 0.4643 (2) | −0.01056 (13) | 0.18344 (12) | 0.0327 (4) | |
| C8 | 0.3702 (2) | −0.05590 (14) | 0.22590 (14) | 0.0400 (5) | |
| H8 | 0.4111 | −0.0932 | 0.2749 | 0.048* | |
| C9 | 0.2134 (2) | −0.04298 (15) | 0.19192 (15) | 0.0445 (5) | |
| H9 | 0.1467 | −0.0715 | 0.2191 | 0.053* | |
| C10 | 0.1528 (2) | 0.01177 (15) | 0.11793 (15) | 0.0445 (5) | |
| H10 | 0.0463 | 0.0184 | 0.0961 | 0.053* | |
| C11 | 0.2462 (2) | 0.05662 (13) | 0.07591 (14) | 0.0390 (4) | |
| H11 | 0.2039 | 0.0927 | 0.0260 | 0.047* | |
| C12 | 0.4060 (2) | 0.04658 (12) | 0.11020 (12) | 0.0314 (4) | |
| C13 | 0.5371 (2) | 0.08392 (13) | 0.08696 (13) | 0.0330 (4) | |
| C14 | 0.6664 (2) | 0.04867 (13) | 0.14399 (13) | 0.0349 (4) | |
| H14 | 0.7669 | 0.0618 | 0.1438 | 0.042* | |
| C15 | 0.5289 (2) | 0.15065 (14) | 0.01681 (14) | 0.0407 (5) | |
| C16 | 0.6745 (2) | 0.17783 (14) | −0.00516 (13) | 0.0365 (4) | |
| H16A | 0.7236 | 0.1273 | −0.0225 | 0.044* | |
| H16B | 0.7453 | 0.2027 | 0.0494 | 0.044* | |
| C17 | 0.6424 (2) | 0.24371 (14) | −0.08307 (13) | 0.0375 (4) | |
| H17A | 0.5508 | 0.2259 | −0.1306 | 0.045* | |
| H17B | 0.6201 | 0.2991 | −0.0596 | 0.045* | |
| C18 | 0.7729 (2) | 0.25523 (12) | −0.12581 (12) | 0.0331 (4) | |
| C19 | 0.7489 (2) | 0.27562 (13) | −0.21829 (13) | 0.0375 (4) | |
| C20 | 0.8658 (3) | 0.27853 (15) | −0.26069 (16) | 0.0512 (6) | |
| H20 | 0.8433 | 0.2895 | −0.3235 | 0.061* | |
| C21 | 1.0150 (3) | 0.26509 (17) | −0.2093 (2) | 0.0612 (7) | |
| H21 | 1.0954 | 0.2681 | −0.2364 | 0.073* | |
| C22 | 1.0444 (3) | 0.24708 (17) | −0.11702 (19) | 0.0583 (7) | |
| H22 | 1.1457 | 0.2387 | −0.0814 | 0.070* | |
| C23 | 0.9255 (2) | 0.24134 (15) | −0.07669 (15) | 0.0452 (5) | |
| H23 | 0.9485 | 0.2277 | −0.0144 | 0.054* | |
| N1 | 0.62637 (18) | −0.00978 (11) | 0.20252 (11) | 0.0368 (4) | |
| N2 | 0.5930 (2) | 0.29460 (14) | −0.27675 (13) | 0.0504 (4) | |
| O1 | 0.68799 (19) | −0.15240 (10) | 0.28042 (12) | 0.0548 (4) | |
| O2 | 0.89596 (16) | −0.05570 (11) | 0.26200 (11) | 0.0528 (4) | |
| O3 | 0.40514 (19) | 0.18257 (14) | −0.02227 (16) | 0.0843 (7) | |
| O4 | 0.5110 (2) | 0.34181 (14) | −0.24777 (13) | 0.0738 (6) | |
| O5 | 0.5554 (2) | 0.26312 (16) | −0.35371 (12) | 0.0846 (7) | |
| S1 | 0.75288 (6) | −0.06854 (4) | 0.28195 (4) | 0.04012 (14) |
| C1 | 0.0297 (10) | 0.0474 (12) | 0.0366 (10) | 0.0047 (8) | 0.0069 (8) | 0.0104 (9) |
| C2 | 0.0462 (13) | 0.0614 (15) | 0.0479 (13) | −0.0007 (11) | 0.0153 (10) | 0.0164 (11) |
| C3 | 0.0641 (17) | 0.094 (2) | 0.0461 (13) | 0.0018 (16) | 0.0239 (12) | 0.0168 (14) |
| C4 | 0.0702 (18) | 0.092 (2) | 0.0437 (13) | 0.0085 (16) | 0.0135 (12) | −0.0041 (14) |
| C5 | 0.0732 (18) | 0.0651 (17) | 0.0550 (15) | −0.0096 (14) | 0.0130 (13) | −0.0070 (13) |
| C6 | 0.0536 (14) | 0.0578 (15) | 0.0476 (13) | −0.0061 (11) | 0.0155 (11) | 0.0091 (11) |
| C7 | 0.0253 (9) | 0.0404 (10) | 0.0338 (9) | −0.0015 (7) | 0.0106 (7) | −0.0059 (8) |
| C8 | 0.0353 (10) | 0.0500 (12) | 0.0379 (10) | −0.0038 (9) | 0.0153 (8) | 0.0015 (9) |
| C9 | 0.0327 (10) | 0.0569 (13) | 0.0499 (12) | −0.0094 (9) | 0.0217 (9) | −0.0047 (10) |
| C10 | 0.0249 (9) | 0.0551 (13) | 0.0551 (12) | −0.0025 (9) | 0.0137 (9) | −0.0089 (11) |
| C11 | 0.0297 (10) | 0.0428 (11) | 0.0431 (11) | 0.0032 (8) | 0.0078 (8) | −0.0022 (9) |
| C12 | 0.0278 (9) | 0.0348 (9) | 0.0327 (9) | −0.0012 (7) | 0.0104 (7) | −0.0058 (7) |
| C13 | 0.0285 (9) | 0.0379 (10) | 0.0345 (9) | −0.0014 (7) | 0.0118 (7) | −0.0030 (8) |
| C14 | 0.0262 (9) | 0.0450 (11) | 0.0356 (9) | −0.0024 (8) | 0.0121 (7) | 0.0008 (8) |
| C15 | 0.0320 (10) | 0.0450 (11) | 0.0458 (11) | 0.0016 (9) | 0.0121 (8) | 0.0065 (9) |
| C16 | 0.0304 (10) | 0.0447 (11) | 0.0333 (9) | −0.0010 (8) | 0.0071 (7) | 0.0069 (8) |
| C17 | 0.0341 (10) | 0.0439 (11) | 0.0341 (10) | 0.0030 (8) | 0.0088 (8) | 0.0061 (8) |
| C18 | 0.0316 (9) | 0.0346 (9) | 0.0312 (9) | −0.0012 (8) | 0.0057 (7) | 0.0035 (7) |
| C19 | 0.0391 (9) | 0.0370 (10) | 0.0352 (9) | 0.0011 (8) | 0.0084 (7) | 0.0092 (8) |
| C20 | 0.0593 (15) | 0.0524 (13) | 0.0483 (12) | 0.0049 (11) | 0.0258 (11) | 0.0171 (10) |
| C21 | 0.0493 (14) | 0.0625 (16) | 0.0833 (19) | 0.0094 (12) | 0.0377 (13) | 0.0260 (14) |
| C22 | 0.0299 (11) | 0.0644 (16) | 0.0780 (17) | 0.0042 (10) | 0.0108 (11) | 0.0224 (13) |
| C23 | 0.0353 (11) | 0.0550 (13) | 0.0400 (11) | −0.0012 (9) | 0.0020 (8) | 0.0097 (10) |
| N1 | 0.0247 (7) | 0.0512 (10) | 0.0353 (8) | −0.0006 (7) | 0.0096 (6) | 0.0061 (7) |
| N2 | 0.0463 (9) | 0.0630 (12) | 0.0374 (10) | 0.0006 (8) | 0.0042 (7) | 0.0201 (9) |
| O1 | 0.0543 (10) | 0.0441 (9) | 0.0673 (11) | 0.0027 (7) | 0.0192 (8) | 0.0051 (8) |
| O2 | 0.0296 (8) | 0.0740 (11) | 0.0580 (9) | 0.0098 (7) | 0.0173 (7) | 0.0095 (8) |
| O3 | 0.0350 (9) | 0.1001 (16) | 0.1185 (17) | 0.0172 (9) | 0.0228 (10) | 0.0669 (14) |
| O4 | 0.0556 (11) | 0.0885 (14) | 0.0741 (13) | 0.0308 (9) | 0.0130 (9) | 0.0299 (10) |
| O5 | 0.0781 (14) | 0.1281 (19) | 0.0350 (9) | −0.0157 (13) | −0.0045 (9) | 0.0106 (11) |
| S1 | 0.0301 (2) | 0.0473 (3) | 0.0443 (3) | 0.0062 (2) | 0.0126 (2) | 0.0080 (2) |
| C1—C6 | 1.378 (3) | C14—N1 | 1.383 (2) |
| C1—C2 | 1.381 (3) | C14—H14 | 0.9300 |
| C1—S1 | 1.751 (2) | C15—O3 | 1.212 (3) |
| C2—C3 | 1.387 (4) | C15—C16 | 1.502 (3) |
| C2—H2 | 0.9300 | C16—C17 | 1.523 (3) |
| C3—C4 | 1.367 (4) | C16—H16A | 0.9700 |
| C3—H3 | 0.9300 | C16—H16B | 0.9700 |
| C4—C5 | 1.370 (4) | C17—C18 | 1.505 (3) |
| C4—H4 | 0.9300 | C17—H17A | 0.9700 |
| C5—C6 | 1.374 (3) | C17—H17B | 0.9700 |
| C5—H5 | 0.9300 | C18—C23 | 1.385 (3) |
| C6—H6 | 0.9300 | C18—C19 | 1.391 (3) |
| C7—C8 | 1.391 (3) | C19—C20 | 1.381 (3) |
| C7—C12 | 1.399 (3) | C19—N2 | 1.465 (3) |
| C7—N1 | 1.408 (2) | C20—C21 | 1.368 (4) |
| C8—C9 | 1.377 (3) | C20—H20 | 0.9300 |
| C8—H8 | 0.9300 | C21—C22 | 1.375 (4) |
| C9—C10 | 1.387 (3) | C21—H21 | 0.9300 |
| C9—H9 | 0.9300 | C22—C23 | 1.379 (3) |
| C10—C11 | 1.377 (3) | C22—H22 | 0.9300 |
| C10—H10 | 0.9300 | C23—H23 | 0.9300 |
| C11—C12 | 1.397 (3) | N1—S1 | 1.6736 (17) |
| C11—H11 | 0.9300 | N2—O4 | 1.207 (3) |
| C12—C13 | 1.445 (2) | N2—O5 | 1.219 (3) |
| C13—C14 | 1.355 (3) | O1—S1 | 1.4199 (17) |
| C13—C15 | 1.467 (3) | O2—S1 | 1.4200 (15) |
| C6—C1—C2 | 121.5 (2) | C13—C15—C16 | 119.20 (17) |
| C6—C1—S1 | 118.98 (16) | C15—C16—C17 | 111.76 (16) |
| C2—C1—S1 | 119.51 (18) | C15—C16—H16A | 109.3 |
| C1—C2—C3 | 118.4 (2) | C17—C16—H16A | 109.3 |
| C1—C2—H2 | 120.8 | C15—C16—H16B | 109.3 |
| C3—C2—H2 | 120.8 | C17—C16—H16B | 109.3 |
| C4—C3—C2 | 120.2 (2) | H16A—C16—H16B | 107.9 |
| C4—C3—H3 | 119.9 | C18—C17—C16 | 114.23 (16) |
| C2—C3—H3 | 119.9 | C18—C17—H17A | 108.7 |
| C3—C4—C5 | 120.7 (3) | C16—C17—H17A | 108.7 |
| C3—C4—H4 | 119.6 | C18—C17—H17B | 108.7 |
| C5—C4—H4 | 119.6 | C16—C17—H17B | 108.7 |
| C4—C5—C6 | 120.2 (3) | H17A—C17—H17B | 107.6 |
| C4—C5—H5 | 119.9 | C23—C18—C19 | 115.16 (18) |
| C6—C5—H5 | 119.9 | C23—C18—C17 | 122.06 (17) |
| C5—C6—C1 | 119.0 (2) | C19—C18—C17 | 122.69 (17) |
| C5—C6—H6 | 120.5 | C20—C19—C18 | 123.49 (19) |
| C1—C6—H6 | 120.5 | C20—C19—N2 | 116.22 (18) |
| C8—C7—C12 | 122.82 (17) | C18—C19—N2 | 120.29 (18) |
| C8—C7—N1 | 130.07 (18) | C21—C20—C19 | 119.3 (2) |
| C12—C7—N1 | 107.11 (16) | C21—C20—H20 | 120.4 |
| C9—C8—C7 | 116.8 (2) | C19—C20—H20 | 120.4 |
| C9—C8—H8 | 121.6 | C20—C21—C22 | 119.1 (2) |
| C7—C8—H8 | 121.6 | C20—C21—H21 | 120.4 |
| C8—C9—C10 | 121.31 (19) | C22—C21—H21 | 120.4 |
| C8—C9—H9 | 119.3 | C21—C22—C23 | 120.7 (2) |
| C10—C9—H9 | 119.3 | C21—C22—H22 | 119.6 |
| C11—C10—C9 | 121.80 (19) | C23—C22—H22 | 119.6 |
| C11—C10—H10 | 119.1 | C22—C23—C18 | 122.2 (2) |
| C9—C10—H10 | 119.1 | C22—C23—H23 | 118.9 |
| C10—C11—C12 | 118.3 (2) | C18—C23—H23 | 118.9 |
| C10—C11—H11 | 120.8 | C14—N1—C7 | 108.51 (15) |
| C12—C11—H11 | 120.8 | C14—N1—S1 | 124.51 (13) |
| C11—C12—C7 | 118.88 (17) | C7—N1—S1 | 126.97 (13) |
| C11—C12—C13 | 134.02 (18) | O4—N2—O5 | 123.7 (2) |
| C7—C12—C13 | 107.10 (16) | O4—N2—C19 | 119.0 (2) |
| C14—C13—C12 | 107.52 (17) | O5—N2—C19 | 117.3 (2) |
| C14—C13—C15 | 127.04 (17) | O1—S1—O2 | 121.30 (10) |
| C12—C13—C15 | 125.39 (17) | O1—S1—N1 | 106.80 (9) |
| C13—C14—N1 | 109.73 (16) | O2—S1—N1 | 104.39 (9) |
| C13—C14—H14 | 125.1 | O1—S1—C1 | 108.84 (10) |
| N1—C14—H14 | 125.1 | O2—S1—C1 | 109.71 (10) |
| O3—C15—C13 | 119.40 (19) | N1—S1—C1 | 104.41 (9) |
| O3—C15—C16 | 121.40 (19) | ||
| C6—C1—C2—C3 | 0.3 (3) | C23—C18—C19—C20 | 2.7 (3) |
| S1—C1—C2—C3 | 178.00 (18) | C17—C18—C19—C20 | −173.8 (2) |
| C1—C2—C3—C4 | 0.2 (4) | C23—C18—C19—N2 | −177.95 (19) |
| C2—C3—C4—C5 | −0.3 (4) | C17—C18—C19—N2 | 5.6 (3) |
| C3—C4—C5—C6 | −0.1 (4) | C18—C19—C20—C21 | −3.4 (4) |
| C4—C5—C6—C1 | 0.6 (4) | N2—C19—C20—C21 | 177.3 (2) |
| C2—C1—C6—C5 | −0.7 (3) | C19—C20—C21—C22 | 1.4 (4) |
| S1—C1—C6—C5 | −178.44 (19) | C20—C21—C22—C23 | 0.9 (4) |
| C12—C7—C8—C9 | 0.6 (3) | C21—C22—C23—C18 | −1.5 (4) |
| N1—C7—C8—C9 | 179.64 (19) | C19—C18—C23—C22 | −0.2 (3) |
| C7—C8—C9—C10 | 0.9 (3) | C17—C18—C23—C22 | 176.3 (2) |
| C8—C9—C10—C11 | −1.0 (3) | C13—C14—N1—C7 | −1.3 (2) |
| C9—C10—C11—C12 | −0.6 (3) | C13—C14—N1—S1 | 178.71 (14) |
| C10—C11—C12—C7 | 2.1 (3) | C8—C7—N1—C14 | −177.3 (2) |
| C10—C11—C12—C13 | −177.6 (2) | C12—C7—N1—C14 | 1.8 (2) |
| C8—C7—C12—C11 | −2.2 (3) | C8—C7—N1—S1 | 2.6 (3) |
| N1—C7—C12—C11 | 178.61 (17) | C12—C7—N1—S1 | −178.24 (14) |
| C8—C7—C12—C13 | 177.62 (18) | C20—C19—N2—O4 | −135.8 (2) |
| N1—C7—C12—C13 | −1.6 (2) | C18—C19—N2—O4 | 44.9 (3) |
| C11—C12—C13—C14 | −179.4 (2) | C20—C19—N2—O5 | 42.3 (3) |
| C7—C12—C13—C14 | 0.8 (2) | C18—C19—N2—O5 | −137.1 (2) |
| C11—C12—C13—C15 | 3.0 (3) | C14—N1—S1—O1 | −139.88 (17) |
| C7—C12—C13—C15 | −176.77 (18) | C7—N1—S1—O1 | 40.16 (19) |
| C12—C13—C14—N1 | 0.3 (2) | C14—N1—S1—O2 | −10.27 (19) |
| C15—C13—C14—N1 | 177.84 (19) | C7—N1—S1—O2 | 169.78 (17) |
| C14—C13—C15—O3 | −172.1 (2) | C14—N1—S1—C1 | 104.91 (17) |
| C12—C13—C15—O3 | 5.0 (3) | C7—N1—S1—C1 | −75.05 (18) |
| C14—C13—C15—C16 | 8.0 (3) | C6—C1—S1—O1 | 172.14 (17) |
| C12—C13—C15—C16 | −174.90 (18) | C2—C1—S1—O1 | −5.6 (2) |
| O3—C15—C16—C17 | −3.1 (3) | C6—C1—S1—O2 | 37.3 (2) |
| C13—C15—C16—C17 | 176.79 (18) | C2—C1—S1—O2 | −140.47 (17) |
| C15—C16—C17—C18 | −164.04 (17) | C6—C1—S1—N1 | −74.09 (18) |
| C16—C17—C18—C23 | −28.2 (3) | C2—C1—S1—N1 | 108.15 (18) |
| C16—C17—C18—C19 | 148.00 (19) |
| H··· | ||||
| C9—H9···O2i | 0.93 | 2.54 | 3.328 (2) | 143 |
| C22—H22···O3ii | 0.93 | 2.42 | 3.319 (3) | 163 |
| C23—H23···O5iii | 0.93 | 2.36 | 3.247 (3) | 160 |
| C16—H16 | 0.97 | 2.73 | 3.565 (2) | 144 |
Hydrogen-bond geometry (, )
Cg3 is the centroid of the C7C12 ring.
|
|
| H |
|
|
|---|---|---|---|---|
| C9H9O2i | 0.93 | 2.54 | 3.328(2) | 143 |
| C22H22O3ii | 0.93 | 2.42 | 3.319(3) | 163 |
| C23H23O5iii | 0.93 | 2.36 | 3.247(3) | 160 |
| C16H16 | 0.97 | 2.73 | 3.565(2) | 144 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .