Literature DB >> 26594518

Crystal structures and hydrogen bonding in the morpholinium salts of four phen-oxy-acetic acid analogues.

Graham Smith1, Daniel E Lynch2.   

Abstract

The anhydrous salts morpholinium (tetra-hydro-2-H-1,4-oxazin-4-ium) phen-oxy-acetate, C4H10NO(+)·C8H7O3 (-), (I), morpholinium (4-fluoro-phen-oxy)acetate, C4H10NO(+)·C8H6 FO3 (-), (II), and isomeric morpholinium (3,5-di-chloro-phen-oxy)acetate (3,5-D), (III), and morpholinium (2,4-di-chloro-phen-oxy)acetic acid (2,4-D), C4H10NO(+)·C8H5Cl2O3 (-), (IV), have been determined and their hydrogen-bonded structures are described. In the crystals of (I), (III) and (IV), one of the the aminium H atoms is involved in a three-centre asymmetric cation-anion N-H⋯O,O' R 1 (2)(4) hydrogen-bonding inter-action with the two carboxyl O-atom acceptors of the anion. With the structure of (II), the primary N-H⋯O inter-action is linear. In the structures of (I), (II) and (III), the second N-H⋯Ocarbox-yl hydrogen bond generates one-dimensional chain structures extending in all cases along [100]. With (IV), the ion pairs are linked though inversion-related N-H⋯O hydrogen bonds [graph set R 4 (2)(8)], giving a cyclic hetero-tetra-meric structure.

Entities:  

Keywords:  2,4-D; 3,5-D; crystal structure; herbicides; hydrogen bonding; morpholine salts; phen­oxy­acetic acids

Year:  2015        PMID: 26594518      PMCID: PMC4645053          DOI: 10.1107/S2056989015019842

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

Morpholine (tetra­hydro-2-H-1,4-oxazine) is an moderately strong base (pK = 8.33) and forms salts with a number of organic acids, some having medical applications, e.g. the salicylate (retarcyl, depasol), used as an analgesic, an anti­pyretic and an anti-inflammatory agent (O’Neil, 2001 ▸). The crystal structures of a number of these morpholinate compounds have been reported, some examples of salts with substituted benzoic acids being the 4-amino­salicylate (André et al., 2009 ▸), and a series of isomeric chloro­nitro­benzoates (2,4-, 2,5-, 4,2-, 4,3- and 5,2-) (Ishida et al., 2001a ▸,b ▸,c ▸). In these, cation–anion hydrogen-bonding inter­actions generate either one-dimensional chains or discrete cyclic hetero­tetra­meric structures. Of inter­est is the mode of hydrogen bonding in crystals of the morpholinium salts of some phen­oxy­acetic acid analogues, no structures of which have been reported previously. The reaction of morpholine with phen­oxy­acetic acid (PAA), (4-fluoro­phen­oxy)acetic acid (PFPA) and with the two isomeric homologues, (3,5-di­chloro­phen­oxy)acetic acid (3,5-D) and the herbicidally active (2,4-di­chloro­phen­oxy)acetic acid (2,4-D) (Zumdahl, 2010 ▸), gave the anhydrous salts (I)–(IV), respectively. Their structures and hydrogen-bonding modes are reported on herein.

Structural commentary

The asymmetric units of (I)–(IV) comprise a morpholinium cation (B) and a phen­oxy­acetate anion (A) in (I) (Fig. 1 ▸), a (4-fluoro­phen­oxy)acetate anion (A) in (II) (Fig. 2 ▸), a 3,5-di­chloro­phen­oxy­acetate anion (A) in (III) (Fig. 3 ▸) and a (2,4-di­chloro­phen­oxy)acetate anion (A) in (IV) (Fig. 4 ▸). The conformation of the oxo­acetate side chains in the anions of (I) and (II) are essentially planar, with the defining torsion angle C1A—O11A—C12A—C13A = 176.75 (14) and 176.53 (14)°, respectively. This anti­periplanar (180±30°) conformation is similar to those of the parent acids PAA (−175.1°; Kennard et al., 1982 ▸), PFPA [176.0 (6)°; Smith et al., 1992 ▸] and their proton-transfer salts, e.g. the ammonium salts of PAA [−177.48 (18)°] and PFPA [−178.98 (17)°] (Smith, 2014 ▸). However, with the 3,5-D and 2,4-D salts, the side-chain conformations are both synclinal (90±30°) [−76.5 (2)° in (III) and 72.91 (19)° in (IV)], similar to that in the parent acid 2,4-D (75.2°; Smith et al., 1976 ▸), in the tryptaminium salt of 2,4-D [81.2 (6)°; Smith & Lynch, 2015a ▸] and in the 2:1 salt-adduct of 3,5-D with 4,4′-bi­pyridine [−71.6 (3)°; Lynch et al., 2003 ▸]. However, in the tryptaminium salt of 3,5-D (Smith & Lynch, 2015b ▸), the ammonium salts of both 2,4-D (Liu et al., 2009 ▸) and 3,5-D (Smith, 2014 ▸), the anti­periplanar conformation is found [equivalent torsion angles = −166.5 (3), 172.61 (8) and −171.35 (15)°, respectively].
Figure 1

The atom-numbering scheme and the mol­ecular conformation of the morpholinium cation (B) and the phen­oxy­acetate anion (A) in (I), with displacement ellipsoids drawn at the 40% probability level. The cation–anion hydrogen bonds are shown as dashed lines.

Figure 2

The atom-numbering scheme and the mol­ecular conformation of the morpholinium cation (B) and the 4-fluoro­phen­oxy)acetate anion (A) in (II), with displacement ellipsoids drawn at the 40% probability level. The cation–anion hydrogen bond is shown as a dashed line.

Figure 3

The atom-numbering scheme and the mol­ecular conformation of the morpholinium cation (B) and the 3,5-D anion (A) in (III), with displacement ellipsoids drawn at the 40% probability level. The cation–anion hydrogen bonds are shown as dashed lines.

Figure 4

The atom-numbering scheme and the mol­ecular conformation of the morpholinium cation (B) and the 2,4-D anion (A) in (IV), with displacement ellipsoids drawn at the 40% probability level. The cation–anion hydrogen bonds are shown as dashed lines.

Supra­molecular features

In the crystals of both (I), (III) and (IV), a primary three-centre (4) N1B—H⋯(O,O′)carbox­yl hydrogen-bonding inter­action is present, with the asymmetry in (I) [N⋯O = 2.7366 (18) and 3.1655 (17) Å] and (IV) [2.683 (2) and 3.115 (2) Å] being significantly greater than that in (III) [2.892 (3) and 2.988 (3) Å] (Tables 1 ▸, 3 ▸ and 4 ▸). With (II), the second N—H⋯O distance is 3.241 (2) Å.
Table 1

Hydrogen-bond geometry (Å, °) for (I)

D—H⋯A D—HH⋯A DA D—H⋯A
N1B—H11B⋯O13A 0.92 (2)1.83 (2)2.7366 (18)169 (2)
N1B—H11B⋯O14A 0.92 (2)2.57 (2)3.1655 (17)123 (1)
N1B—H12B⋯O14A i 0.95 (1)1.76 (1)2.7061 (17)176 (1)
C4A—H4A⋯O4B ii 0.952.593.447 (2)151
C6B—H62B⋯O13A iii 0.992.393.148 (2)133

Symmetry codes: (i) ; (ii) ; (iii) .

Table 3

Hydrogen-bond geometry (Å, °) for (III)

D—H⋯A D—HH⋯A DA D—H⋯A
N1B—H11B⋯O13A 0.88 (2)2.07 (2)2.892 (3)156 (2)
N1B—H11B⋯O14A 0.88 (2)2.26 (2)2.988 (3)141 (2)
N1B—H12B⋯O14A i 0.88 (2)1.87 (2)2.737 (3)170 (2)
C12A—H12A⋯O13A ii 0.992.413.398 (3)173

Symmetry codes: (i) ; (ii) .

Table 4

Hydrogen-bond geometry (Å, °) for (IV)

D—H⋯A D—HH⋯A DA D—H⋯A
N1B—H11B⋯O13A i 0.91 (2)2.56 (2)3.115 (2)120 (1)
N1B—H11B⋯O14A i 0.91 (2)1.79 (2)2.683 (2)169 (2)
N1B—H12B⋯O13A 0.87 (2)1.92 (2)2.747 (2)158 (2)
C12A—H12A⋯O14A ii 0.992.503.484 (2)173
C2B—H21B⋯O11A iii 0.992.573.477 (2)151
C5B—H52B⋯O4B iv 0.992.583.489 (3)153

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

The hydrogen-bonding extensions involving the second aminium H atom of the cation result in different structures in (I)–(III) compared to that in (IV). With (I)–(III), the primary heterodimers are all extended along a through an N1B—H⋯O14A i hydrogen bond (Tables 1 ▸–3 ▸ ▸, respectively), into one-dimensional ribbon structures (Figs. 5 ▸–7 ▸ ▸). These ribbon structures provide further examples of the common hydrogen-bonded structure type found among the anhydrous aromatic morpholinium benzoate salts, e.g. with salicylic acid (Smith & Lynch, 2015b ▸) and with 2-chloro-4-nitro­benzoic acid (Ishida et al., 2001a ▸). In both of these examples, helical chains extend along 21screw axes in the crystals. Present also in structures of (I)–(IV) are minor weak inter-unit C—H⋯O inter­actions: in (I), C4A—H⋯O4B ii (Table 1 ▸); in (II), C4A—H⋯O4B ii; C6B—H⋯O13A iii (Table 2 ▸): in (III), Cl2A—H⋯O13A ii (Table 3 ▸).
Table 2

Hydrogen-bond geometry (Å, °) for (II)

D—H⋯A D—HH⋯A DA D—H⋯A
N1B—H11B⋯O14A i 0.97 (2)1.76 (2)2.725 (2)175 (2)
N1B—H12B⋯O13A 0.94 (2)1.80 (2)2.718 (2)165 (2)
C6B—H61B⋯O14A ii 0.992.383.188 (2)138

Symmetry codes: (i) ; (ii) .

Figure 5

The one-dimensional hydrogen-bonded polymeric structure of (I) extending along a. For symmetry codes, see Table 1 ▸.

Figure 6

The one-dimensional hydrogen-bonded polymeric structure of (II) extending along a. For symmetry codes, see Table 2 ▸.

Figure 7

The one-dimensional hydrogen-bonded polymeric structure of (III) extending along a. For symmetry codes, see Table 3 ▸

In the crystal of (IV), the second N1B—H⋯O14A i hydrogen bond generates a centrosymmetric hetero­tetra­meric ring structure [graph set (8)] (Fig. 8 ▸). For symmetry code (i), see Table 4 ▸. This cyclic system typifies the second structure type also found in a number of examples of morpholinium salts with ring-substituted benzoic acids, e.g. in the 2-chloro-5-nitro-, 4-chloro-2-nitro-, 4-chloro-3-nitro- and 5-chloro-2-nitro­benzoate series (Ishida et al., 2001a ▸,b ▸,c ▸] and in the 4-amino­salicylate (André et al., 2009 ▸).
Figure 8

The cyclic hydrogen-bonded hetero­tetra­mer structure of (IV). For symmetry codes, see Table 4 ▸.

Only weak inter-unit C—H⋯O inter­actions to carboxyl or phen­oxy O-atom acceptors are present in (IV) (Table 4 ▸), while no π–π inter­actions are found in any of the structures.

Synthesis and crystallization

The title compounds (I)–(IV) were prepared by the dropwise addition of morpholine at room temperature to solutions of phen­oxy­acetic acid (150 mg), (4-fluoro­phen­oxy)acetic (170 mg), (2,4-di­chloro­phen­oxy)acetic acid or (2,4-di­chloro­phen­oxy)acetic acid (220 mg), respectively, in 15 ml of ethanol. Room-temperature evaporation of the solutions gave either colourless plates of (III) or needles of (IV) from which specimens were cleaved for the X-ray analyses. For (I) and (II), the same preparative procedure was employed using phen­oxy­acetic acid or (4-fluoro­phen­oxy)acetic acid but the final oils which resulted after solvent evaporation were redissolved in ethanol, finally giving thin colourless fragile plates of compounds (I) and (II) from which specimens were cleaved for the X-ray analyses.

Refinement details

Crystal data, data collection and structure refinement details are given in Table 5 ▸. H atoms were placed in calculated positions (aromatic C—H = 0.95 Å or methyl­ene C—H = 0.99 Å) and were allowed to ride in the refinements, with U iso(H) = 1.2U eq(C). The aminium H atoms were located in difference Fourier analyses and were allowed to refine with distance restraints [N—H = 0.90 (2) Å] and U iso(H) = 1.2U eq(N).
Table 5

Experimental details

 (I)(II)(III)(IV)
Crystal data
Chemical formulaC4H10NO+·C8H7O3 C4H10NO+·C8H6FO3 C4H10NO+·C8H5Cl2O3 C4H10NO+·C8H5Cl2O3
M r 239.27257.26308.15308.15
Crystal system, space groupTriclinic, P Triclinic, P Triclinic, P Monoclinic, P21/c
Temperature (K)200200200200
a, b, c (Å)5.7079 (5), 9.7735 (9), 11.3586 (10)5.7997 (5), 10.2605 (10), 10.4836 (11)5.1733 (4), 11.3751 (10), 11.7808 (10)9.3657 (5), 7.1702 (3), 21.1340 (11)
α, β, γ (°)78.277 (7), 86.171 (7), 77.512 (7)88.388 (8), 82.792 (8), 80.325 (8)86.904 (7), 85.106 (7), 77.936 (7)90, 97.981 (5), 90
V3)605.58 (10)610.11 (10)675.01 (10)1405.48 (12)
Z 2224
Radiation typeMo KαMo KαMo KαMo Kα
μ (mm−1)0.100.110.490.47
Crystal size (mm)0.50 × 0.15 × 0.040.50 × 0.25 × 0.050.50 × 0.13 × 0.100.35 × 0.35 × 0.12
 
Data collection
DiffractometerOxford Diffraction Gemini-S CCD detectorOxford Diffraction Gemini-S CCD detectorOxford Diffraction Gemini-S CCD detectorOxford Diffraction Gemini-S CCD detector
Absorption correctionMulti-scan (CrysAlis PRO; Agilent, 2014)Multi-scan (CrysAlis PRO; Agilent, 2014)Multi-scan (CrysAlis PRO; Agilent, 2014)Multi-scan (CrysAlis PRO; Agilent, 2014)
T min, T max 0.860, 0.9800.488, 0.9800.903, 0.9890.933, 0.980
No. of measured, independent and observed reflections4172, 2370, 1765 [I > 2σ(I)]4984, 2394, 1743 [I > 2σ(I)]5616, 2646, 2096 [I > 2σ(I)]6400, 2754, 2273 [I.2σ(I)]
R int 0.0330.0330.0270.026
(sin θ/λ)max−1)0.6170.6170.6170.617
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.048, 0.113, 1.020.046, 0.116, 1.040.039, 0.091, 1.030.038, 0.091, 1.04
No. of reflections2370239426462754
No. of parameters154169178178
No. of restraints0222
H-atom treatmentH atoms treated by a mixture of independent and constrained refinementH atoms treated by a mixture of independent and constrained refinementH atoms treated by a mixture of independent and constrained refinementH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å−3)0.16, −0.170.19, −0.200.24, −0.260.28, −0.26

Computer programs: CrysAlis PRO (Agilent, 2014 ▸), SIR92 (Altomare et al., 1993 ▸), SHELXS97 and SHELXL97 (Sheldrick, 2008 ▸) within WinGX (Farrugia, 2012 ▸) and PLATON (Spek, 2009 ▸).

Crystal structure: contains datablock(s) global, I, II, III, IV. DOI: 10.1107/S2056989015019842/su5227sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015019842/su5227Isup2.hkl Structure factors: contains datablock(s) II. DOI: 10.1107/S2056989015019842/su5227IIsup3.hkl Structure factors: contains datablock(s) III. DOI: 10.1107/S2056989015019842/su5227IIIsup4.hkl Structure factors: contains datablock(s) IV. DOI: 10.1107/S2056989015019842/su5227IVsup5.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015019842/su5227Isup6.cml Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015019842/su5227IIsup7.cml Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015019842/su5227IIIsup8.cml Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015019842/su5227IVsup9.cml CCDC references: 1432389, 1432388, 1432387, 1432386 Additional supporting information: crystallographic information; 3D view; checkCIF report
C4H10NO+·C8H7O3Z = 2
Mr = 239.27F(000) = 256
Triclinic, P1Dx = 1.312 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 5.7079 (5) ÅCell parameters from 1029 reflections
b = 9.7735 (9) Åθ = 3.9–28.5°
c = 11.3586 (10) ŵ = 0.10 mm1
α = 78.277 (7)°T = 200 K
β = 86.171 (7)°Plate, colourless
γ = 77.512 (7)°0.50 × 0.15 × 0.04 mm
V = 605.58 (10) Å3
Oxford Diffraction Gemini-S CCD-detector diffractometer2370 independent reflections
Radiation source: Enhance (Mo) X-ray source1765 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.033
Detector resolution: 16.077 pixels mm-1θmax = 26.0°, θmin = 3.1°
ω scansh = −7→6
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2014)k = −12→12
Tmin = 0.860, Tmax = 0.980l = −13→13
4172 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.113H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.0456P)2] where P = (Fo2 + 2Fc2)/3
2370 reflections(Δ/σ)max < 0.001
154 parametersΔρmax = 0.16 e Å3
0 restraintsΔρmin = −0.17 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O11A0.3926 (2)0.81847 (13)0.38178 (10)0.0374 (4)
O13A0.11992 (19)0.65034 (13)0.51716 (10)0.0358 (4)
O14A0.41444 (19)0.54699 (13)0.64451 (10)0.0323 (4)
C1A0.5198 (3)0.91643 (18)0.32122 (15)0.0303 (5)
C2A0.7157 (3)0.94974 (19)0.36542 (16)0.0346 (6)
C3A0.8267 (3)1.0526 (2)0.29642 (17)0.0415 (7)
C4A0.7481 (4)1.1208 (2)0.18324 (18)0.0449 (7)
C5A0.5549 (4)1.0854 (2)0.13875 (17)0.0432 (7)
C6A0.4402 (3)0.98450 (19)0.20676 (16)0.0365 (6)
C12A0.4895 (3)0.73323 (18)0.49189 (14)0.0288 (5)
C13A0.3264 (3)0.63578 (18)0.55411 (14)0.0268 (5)
O4B−0.1545 (2)0.39037 (15)0.94974 (10)0.0445 (5)
N1B−0.1183 (2)0.50356 (15)0.70035 (12)0.0270 (4)
C2B−0.1277 (3)0.59359 (19)0.79155 (14)0.0322 (6)
C3B−0.2632 (3)0.5347 (2)0.90159 (15)0.0386 (6)
C5B−0.1515 (4)0.3030 (2)0.86300 (16)0.0410 (7)
C6B−0.0136 (3)0.35172 (19)0.75076 (15)0.0349 (6)
H2A0.773900.902400.442700.0420*
H3A0.959501.076600.327700.0500*
H4A0.825701.191200.136600.0540*
H5A0.500301.130900.060400.0520*
H6A0.306500.961400.175500.0440*
H11A0.513200.796500.546000.0350*
H12A0.648200.674700.475300.0350*
H11B−0.032 (3)0.5424 (18)0.6353 (13)0.0320*
H12B−0.280 (2)0.5164 (19)0.6782 (13)0.0320*
H21B−0.208700.693000.758400.0390*
H22B0.037200.594300.813100.0390*
H31B−0.267100.593600.963300.0460*
H32B−0.430700.539800.880400.0460*
H51B−0.318400.305900.842200.0490*
H52B−0.077700.202900.898200.0490*
H61B0.157000.341400.769600.0420*
H62B−0.021200.292000.691000.0420*
U11U22U33U12U13U23
O11A0.0348 (7)0.0363 (8)0.0397 (7)−0.0186 (6)−0.0046 (5)0.0088 (6)
O13A0.0252 (7)0.0472 (9)0.0342 (7)−0.0162 (6)−0.0014 (5)0.0031 (6)
O14A0.0270 (6)0.0366 (8)0.0316 (7)−0.0121 (6)−0.0004 (5)0.0030 (6)
C1A0.0299 (9)0.0232 (9)0.0364 (10)−0.0081 (8)0.0070 (8)−0.0021 (8)
C2A0.0351 (10)0.0320 (11)0.0373 (10)−0.0128 (8)0.0028 (8)−0.0028 (8)
C3A0.0387 (11)0.0391 (12)0.0509 (12)−0.0201 (9)0.0074 (9)−0.0086 (10)
C4A0.0515 (12)0.0360 (12)0.0487 (12)−0.0222 (10)0.0140 (10)−0.0025 (10)
C5A0.0545 (12)0.0326 (11)0.0387 (11)−0.0117 (10)0.0037 (9)0.0030 (9)
C6A0.0378 (10)0.0307 (11)0.0405 (10)−0.0105 (9)−0.0012 (8)−0.0018 (8)
C12A0.0255 (9)0.0281 (10)0.0328 (9)−0.0101 (8)0.0001 (7)−0.0012 (8)
C13A0.0257 (9)0.0290 (10)0.0273 (9)−0.0093 (8)0.0044 (7)−0.0071 (8)
O4B0.0641 (9)0.0436 (9)0.0267 (7)−0.0196 (7)−0.0014 (6)0.0001 (6)
N1B0.0239 (7)0.0331 (9)0.0247 (7)−0.0120 (7)0.0021 (6)−0.0015 (6)
C2B0.0333 (10)0.0317 (10)0.0342 (10)−0.0119 (8)0.0013 (8)−0.0073 (8)
C3B0.0458 (11)0.0422 (12)0.0295 (10)−0.0137 (9)0.0061 (8)−0.0083 (9)
C5B0.0577 (13)0.0309 (11)0.0363 (10)−0.0180 (9)−0.0055 (9)−0.0003 (8)
C6B0.0366 (10)0.0313 (11)0.0356 (10)−0.0045 (8)−0.0037 (8)−0.0057 (8)
O11A—C1A1.372 (2)C2A—H2A0.9500
O11A—C12A1.426 (2)C3A—H3A0.9500
O13A—C13A1.247 (2)C4A—H4A0.9500
O14A—C13A1.256 (2)C5A—H5A0.9500
O4B—C5B1.426 (2)C6A—H6A0.9500
O4B—C3B1.424 (2)C12A—H11A0.9900
N1B—C6B1.485 (2)C12A—H12A0.9900
N1B—C2B1.481 (2)C2B—C3B1.504 (2)
N1B—H12B0.948 (12)C5B—C6B1.501 (3)
N1B—H11B0.923 (16)C2B—H21B0.9900
C1A—C6A1.391 (2)C2B—H22B0.9900
C1A—C2A1.381 (2)C3B—H31B0.9900
C2A—C3A1.384 (3)C3B—H32B0.9900
C3A—C4A1.378 (3)C5B—H51B0.9900
C4A—C5A1.379 (3)C5B—H52B0.9900
C5A—C6A1.378 (3)C6B—H61B0.9900
C12A—C13A1.515 (2)C6B—H62B0.9900
C1A—O11A—C12A116.65 (13)C13A—C12A—H11A109.00
C3B—O4B—C5B110.28 (13)O11A—C12A—H11A109.00
C2B—N1B—C6B110.91 (13)C13A—C12A—H12A109.00
C6B—N1B—H11B113.4 (11)O11A—C12A—H12A109.00
C2B—N1B—H12B104.8 (10)H11A—C12A—H12A108.00
H11B—N1B—H12B109.0 (14)N1B—C2B—C3B109.23 (14)
C2B—N1B—H11B106.3 (10)O4B—C3B—C2B111.23 (14)
C6B—N1B—H12B111.9 (11)O4B—C5B—C6B111.72 (16)
O11A—C1A—C6A115.56 (15)N1B—C6B—C5B109.35 (14)
C2A—C1A—C6A119.48 (16)N1B—C2B—H21B110.00
O11A—C1A—C2A124.96 (15)N1B—C2B—H22B110.00
C1A—C2A—C3A119.58 (16)C3B—C2B—H21B110.00
C2A—C3A—C4A121.20 (18)C3B—C2B—H22B110.00
C3A—C4A—C5A118.97 (19)H21B—C2B—H22B108.00
C4A—C5A—C6A120.65 (18)O4B—C3B—H31B109.00
C1A—C6A—C5A120.10 (17)O4B—C3B—H32B109.00
O11A—C12A—C13A111.82 (14)C2B—C3B—H31B109.00
O13A—C13A—O14A125.13 (16)C2B—C3B—H32B109.00
O13A—C13A—C12A120.24 (14)H31B—C3B—H32B108.00
O14A—C13A—C12A114.59 (15)O4B—C5B—H51B109.00
C3A—C2A—H2A120.00O4B—C5B—H52B109.00
C1A—C2A—H2A120.00C6B—C5B—H51B109.00
C4A—C3A—H3A119.00C6B—C5B—H52B109.00
C2A—C3A—H3A119.00H51B—C5B—H52B108.00
C5A—C4A—H4A121.00N1B—C6B—H61B110.00
C3A—C4A—H4A121.00N1B—C6B—H62B110.00
C4A—C5A—H5A120.00C5B—C6B—H61B110.00
C6A—C5A—H5A120.00C5B—C6B—H62B110.00
C5A—C6A—H6A120.00H61B—C6B—H62B108.00
C1A—C6A—H6A120.00
C12A—O11A—C1A—C2A−8.1 (2)O11A—C1A—C2A—C3A−178.84 (17)
C12A—O11A—C1A—C6A171.64 (15)C1A—C2A—C3A—C4A−1.2 (3)
C1A—O11A—C12A—C13A176.53 (14)C2A—C3A—C4A—C5A0.1 (3)
C5B—O4B—C3B—C2B−60.23 (18)C3A—C4A—C5A—C6A0.7 (3)
C3B—O4B—C5B—C6B59.8 (2)C4A—C5A—C6A—C1A−0.4 (3)
C6B—N1B—C2B—C3B−55.34 (17)O11A—C12A—C13A—O14A172.45 (14)
C2B—N1B—C6B—C5B54.74 (18)O11A—C12A—C13A—O13A−9.8 (2)
C6A—C1A—C2A—C3A1.5 (3)N1B—C2B—C3B—O4B58.00 (18)
O11A—C1A—C6A—C5A179.61 (16)O4B—C5B—C6B—N1B−56.8 (2)
C2A—C1A—C6A—C5A−0.7 (3)
D—H···AD—HH···AD···AD—H···A
N1B—H11B···O13A0.92 (2)1.83 (2)2.7366 (18)169 (2)
N1B—H11B···O14A0.92 (2)2.57 (2)3.1655 (17)123 (1)
N1B—H12B···O14Ai0.95 (1)1.76 (1)2.7061 (17)176 (1)
C4A—H4A···O4Bii0.952.593.447 (2)151
C6B—H62B···O13Aiii0.992.393.148 (2)133
C4H10NO+·C8H6FO3Z = 2
Mr = 257.26F(000) = 272
Triclinic, P1Dx = 1.400 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 5.7997 (5) ÅCell parameters from 1163 reflections
b = 10.2605 (10) Åθ = 4.0–28.4°
c = 10.4836 (11) ŵ = 0.11 mm1
α = 88.388 (8)°T = 200 K
β = 82.792 (8)°Plate, colourless
γ = 80.325 (8)°0.50 × 0.25 × 0.05 mm
V = 610.11 (10) Å3
Oxford Diffraction Gemini-S CCD-detector diffractometer2394 independent reflections
Radiation source: fine-focus sealed tube1743 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.033
Detector resolution: 16.077 pixels mm-1θmax = 26.0°, θmin = 3.6°
ω scansh = −7→6
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2014)k = −10→12
Tmin = 0.488, Tmax = 0.980l = −12→12
4984 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.116H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.046P)2 + 0.0267P] where P = (Fo2 + 2Fc2)/3
2394 reflections(Δ/σ)max < 0.001
169 parametersΔρmax = 0.19 e Å3
2 restraintsΔρmin = −0.20 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
F4A1.10905 (19)0.50899 (12)0.11938 (12)0.0518 (4)
O11A0.3317 (2)0.71651 (12)0.44716 (12)0.0328 (4)
O13A−0.0039 (2)0.82589 (13)0.62958 (12)0.0331 (4)
O14A−0.2493 (2)0.88910 (13)0.48447 (12)0.0350 (4)
C1A0.5169 (3)0.66778 (16)0.35718 (18)0.0255 (6)
C2A0.5357 (3)0.69979 (18)0.22788 (18)0.0300 (6)
C3A0.7372 (3)0.64655 (19)0.14698 (19)0.0357 (6)
C4A0.9096 (3)0.56021 (18)0.1981 (2)0.0331 (6)
C5A0.8925 (3)0.52405 (18)0.3247 (2)0.0333 (6)
C6A0.6948 (3)0.57908 (18)0.40512 (19)0.0308 (6)
C12A0.1408 (3)0.80714 (17)0.40429 (17)0.0263 (6)
C13A−0.0514 (3)0.84287 (16)0.51649 (18)0.0249 (6)
O4B0.3300 (2)0.84416 (14)0.96211 (13)0.0458 (5)
N1B0.4282 (3)0.85297 (15)0.68920 (15)0.0288 (5)
C2B0.4898 (3)0.72899 (19)0.76326 (19)0.0357 (7)
C3B0.3244 (4)0.7319 (2)0.8863 (2)0.0415 (7)
C5B0.2614 (4)0.9620 (2)0.8921 (2)0.0425 (7)
C6B0.4214 (3)0.96981 (18)0.76981 (19)0.0329 (6)
H2A0.411900.757800.194200.0360*
H3A0.754600.669600.058300.0430*
H5A1.013500.462600.356800.0400*
H6A0.680300.556100.493800.0370*
H11A0.076200.766300.335100.0320*
H12A0.198100.888100.369200.0320*
H11B0.541 (3)0.861 (2)0.6143 (17)0.0500*
H12B0.283 (3)0.855 (2)0.6580 (19)0.0500*
H21B0.477500.651800.711400.0430*
H22B0.654200.720400.783100.0430*
H31B0.368800.650300.936500.0500*
H32B0.161900.733600.865700.0500*
H51B0.263501.039400.946000.0510*
H52B0.098200.965100.872200.0510*
H61B0.365001.051200.722000.0390*
H62B0.582200.974400.789700.0390*
U11U22U33U12U13U23
F4A0.0376 (7)0.0649 (8)0.0429 (8)0.0137 (6)0.0067 (6)−0.0140 (6)
O11A0.0251 (6)0.0409 (8)0.0265 (8)0.0079 (5)0.0010 (5)0.0031 (6)
O13A0.0230 (6)0.0513 (8)0.0237 (8)−0.0042 (6)−0.0012 (6)0.0015 (6)
O14A0.0216 (7)0.0497 (8)0.0300 (8)0.0041 (6)−0.0036 (6)0.0026 (6)
C1A0.0231 (9)0.0256 (9)0.0259 (11)−0.0003 (7)−0.0003 (8)−0.0031 (8)
C2A0.0297 (10)0.0304 (10)0.0270 (11)0.0040 (8)−0.0045 (8)−0.0024 (8)
C3A0.0379 (11)0.0405 (11)0.0244 (11)0.0025 (9)0.0015 (9)−0.0043 (9)
C4A0.0265 (10)0.0342 (10)0.0346 (13)0.0025 (8)0.0039 (8)−0.0122 (9)
C5A0.0253 (9)0.0337 (10)0.0383 (13)0.0040 (8)−0.0053 (9)−0.0006 (9)
C6A0.0287 (10)0.0344 (10)0.0275 (11)−0.0018 (8)−0.0018 (8)0.0043 (9)
C12A0.0237 (9)0.0273 (9)0.0259 (11)0.0011 (7)−0.0022 (8)0.0005 (8)
C13A0.0224 (9)0.0261 (9)0.0266 (11)−0.0053 (7)−0.0023 (8)−0.0003 (8)
O4B0.0628 (10)0.0521 (9)0.0227 (8)−0.0119 (7)−0.0039 (7)0.0049 (7)
N1B0.0222 (8)0.0415 (9)0.0217 (9)−0.0032 (7)−0.0014 (7)0.0008 (7)
C2B0.0345 (10)0.0336 (11)0.0384 (13)−0.0030 (8)−0.0062 (9)0.0006 (9)
C3B0.0494 (13)0.0433 (12)0.0339 (13)−0.0160 (10)−0.0043 (10)0.0084 (10)
C5B0.0488 (12)0.0450 (13)0.0300 (13)−0.0015 (10)0.0015 (10)−0.0025 (10)
C6B0.0337 (10)0.0346 (11)0.0298 (12)−0.0034 (8)−0.0057 (9)0.0034 (9)
F4A—C4A1.370 (2)C12A—C13A1.523 (3)
O11A—C1A1.373 (2)C2A—H2A0.9500
O11A—C12A1.431 (2)C3A—H3A0.9500
O13A—C13A1.251 (2)C5A—H5A0.9500
O14A—C13A1.249 (2)C6A—H6A0.9500
O4B—C5B1.422 (2)C12A—H11A0.9900
O4B—C3B1.425 (2)C12A—H12A0.9900
N1B—C6B1.478 (2)C2B—C3B1.506 (3)
N1B—C2B1.487 (2)C5B—C6B1.494 (3)
N1B—H12B0.938 (18)C2B—H21B0.9900
N1B—H11B0.968 (18)C2B—H22B0.9900
C1A—C6A1.391 (3)C3B—H31B0.9900
C1A—C2A1.381 (3)C3B—H32B0.9900
C2A—C3A1.395 (3)C5B—H51B0.9900
C3A—C4A1.372 (3)C5B—H52B0.9900
C4A—C5A1.364 (3)C6B—H61B0.9900
C5A—C6A1.382 (3)C6B—H62B0.9900
C1A—O11A—C12A117.83 (14)C13A—C12A—H11A110.00
C3B—O4B—C5B109.82 (15)O11A—C12A—H11A110.00
C2B—N1B—C6B110.58 (15)C13A—C12A—H12A110.00
C6B—N1B—H11B106.7 (12)O11A—C12A—H12A110.00
C2B—N1B—H12B110.3 (12)H11A—C12A—H12A108.00
H11B—N1B—H12B105.8 (16)N1B—C2B—C3B109.48 (16)
C2B—N1B—H11B112.8 (12)O4B—C3B—C2B111.75 (17)
C6B—N1B—H12B110.5 (12)O4B—C5B—C6B111.70 (17)
O11A—C1A—C6A114.80 (16)N1B—C6B—C5B110.52 (15)
C2A—C1A—C6A119.88 (17)N1B—C2B—H21B110.00
O11A—C1A—C2A125.33 (16)N1B—C2B—H22B110.00
C1A—C2A—C3A119.71 (17)C3B—C2B—H21B110.00
C2A—C3A—C4A118.64 (18)C3B—C2B—H22B110.00
C3A—C4A—C5A122.83 (18)H21B—C2B—H22B108.00
F4A—C4A—C5A118.33 (16)O4B—C3B—H31B109.00
F4A—C4A—C3A118.84 (18)O4B—C3B—H32B109.00
C4A—C5A—C6A118.38 (17)C2B—C3B—H31B109.00
C1A—C6A—C5A120.53 (18)C2B—C3B—H32B109.00
O11A—C12A—C13A109.56 (14)H31B—C3B—H32B108.00
O13A—C13A—O14A125.43 (17)O4B—C5B—H51B109.00
O14A—C13A—C12A114.50 (16)O4B—C5B—H52B109.00
O13A—C13A—C12A120.06 (15)C6B—C5B—H51B109.00
C3A—C2A—H2A120.00C6B—C5B—H52B109.00
C1A—C2A—H2A120.00H51B—C5B—H52B108.00
C4A—C3A—H3A121.00N1B—C6B—H61B110.00
C2A—C3A—H3A121.00N1B—C6B—H62B110.00
C4A—C5A—H5A121.00C5B—C6B—H61B110.00
C6A—C5A—H5A121.00C5B—C6B—H62B110.00
C5A—C6A—H6A120.00H61B—C6B—H62B108.00
C1A—C6A—H6A120.00
C12A—O11A—C1A—C2A0.5 (2)C1A—C2A—C3A—C4A1.8 (3)
C12A—O11A—C1A—C6A−179.26 (15)C2A—C3A—C4A—F4A−179.19 (16)
C1A—O11A—C12A—C13A176.75 (14)C2A—C3A—C4A—C5A0.0 (3)
C3B—O4B—C5B—C6B−59.8 (2)C3A—C4A—C5A—C6A−1.4 (3)
C5B—O4B—C3B—C2B60.3 (2)F4A—C4A—C5A—C6A177.88 (16)
C6B—N1B—C2B—C3B53.5 (2)C4A—C5A—C6A—C1A0.8 (3)
C2B—N1B—C6B—C5B−53.7 (2)O11A—C12A—C13A—O14A−160.39 (14)
C6A—C1A—C2A—C3A−2.3 (3)O11A—C12A—C13A—O13A20.1 (2)
O11A—C1A—C2A—C3A177.92 (16)N1B—C2B—C3B—O4B−57.4 (2)
C2A—C1A—C6A—C5A1.0 (3)O4B—C5B—C6B—N1B57.1 (2)
O11A—C1A—C6A—C5A−179.22 (16)
D—H···AD—HH···AD···AD—H···A
N1B—H11B···O14Ai0.97 (2)1.76 (2)2.725 (2)175 (2)
N1B—H12B···O13A0.94 (2)1.80 (2)2.718 (2)165 (2)
C6B—H61B···O14Aii0.992.383.188 (2)138
C4H10NO+·C8H5Cl2O3Z = 2
Mr = 308.15F(000) = 320
Triclinic, P1Dx = 1.516 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 5.1733 (4) ÅCell parameters from 1520 reflections
b = 11.3751 (10) Åθ = 3.7–27.8°
c = 11.7808 (10) ŵ = 0.49 mm1
α = 86.904 (7)°T = 200 K
β = 85.106 (7)°Needle, colourless
γ = 77.936 (7)°0.50 × 0.13 × 0.10 mm
V = 675.01 (10) Å3
Oxford Diffraction Gemini-S CCD-detector diffractometer2646 independent reflections
Radiation source: fine-focus sealed tube2096 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.027
Detector resolution: 16.077 pixels mm-1θmax = 26.0°, θmin = 3.5°
ω scansh = −6→6
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2014)k = −14→12
Tmin = 0.903, Tmax = 0.989l = −14→14
5616 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.091H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0328P)2 + 0.273P] where P = (Fo2 + 2Fc2)/3
2646 reflections(Δ/σ)max = 0.001
178 parametersΔρmax = 0.24 e Å3
2 restraintsΔρmin = −0.26 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl3A0.43721 (11)0.33427 (5)1.07395 (5)0.0409 (2)
Cl5A0.87160 (12)−0.05932 (5)0.83964 (5)0.0423 (2)
O11A1.2226 (3)0.31888 (13)0.77458 (13)0.0356 (5)
O13A0.8276 (3)0.47790 (19)0.67505 (15)0.0575 (7)
O14A1.0229 (3)0.63014 (15)0.69348 (14)0.0476 (6)
C1A1.0356 (4)0.26801 (19)0.83573 (17)0.0271 (6)
C2A0.8470 (4)0.32703 (19)0.91505 (17)0.0281 (6)
C3A0.6719 (4)0.26282 (19)0.97100 (17)0.0279 (6)
C4A0.6730 (4)0.14542 (19)0.94986 (17)0.0307 (7)
C5A0.8641 (4)0.08971 (19)0.87030 (18)0.0303 (7)
C6A1.0479 (4)0.14815 (19)0.81392 (18)0.0300 (7)
C12A1.2129 (4)0.44437 (19)0.77898 (19)0.0306 (7)
C13A1.0030 (4)0.5221 (2)0.70886 (18)0.0335 (7)
O4B0.3249 (3)0.88990 (15)0.45028 (14)0.0502 (6)
N1B0.4795 (4)0.70096 (19)0.61100 (17)0.0416 (7)
C2B0.5070 (5)0.6814 (2)0.48655 (19)0.0395 (8)
C3B0.3059 (4)0.7719 (2)0.4277 (2)0.0418 (8)
C5B0.4761 (4)0.8273 (2)0.6354 (2)0.0415 (8)
C6B0.2754 (5)0.9090 (2)0.5686 (2)0.0466 (8)
H2A0.838200.408900.930600.0340*
H4A0.547400.104200.988400.0370*
H6A1.180900.107200.761000.0360*
H12A1.388600.460700.751300.0370*
H13A1.177900.467900.859400.0370*
H11B0.607 (4)0.648 (2)0.641 (2)0.0560*
H12B0.332 (4)0.684 (2)0.644 (2)0.0560*
H21B0.482700.599400.472900.0470*
H22B0.687200.688200.455200.0470*
H31B0.332600.760600.344500.0500*
H32B0.126200.759500.453700.0500*
H51B0.653600.845500.614900.0500*
H52B0.432100.840100.717900.0500*
H61B0.096600.895100.594100.0560*
H62B0.278800.993600.583000.0560*
U11U22U33U12U13U23
Cl3A0.0453 (3)0.0386 (3)0.0341 (3)−0.0032 (3)0.0093 (2)−0.0012 (2)
Cl5A0.0563 (4)0.0308 (3)0.0431 (3)−0.0179 (3)0.0037 (3)−0.0068 (2)
O11A0.0296 (8)0.0266 (8)0.0495 (10)−0.0083 (6)0.0073 (7)0.0017 (7)
O13A0.0363 (10)0.0903 (15)0.0527 (11)−0.0302 (10)−0.0208 (8)0.0323 (10)
O14A0.0523 (10)0.0345 (10)0.0491 (10)0.0042 (8)−0.0036 (8)0.0083 (8)
C1A0.0251 (10)0.0283 (11)0.0291 (11)−0.0076 (9)−0.0058 (9)0.0029 (9)
C2A0.0310 (11)0.0228 (11)0.0310 (11)−0.0054 (9)−0.0070 (9)0.0017 (9)
C3A0.0291 (11)0.0308 (12)0.0226 (10)−0.0040 (9)−0.0026 (8)0.0026 (9)
C4A0.0329 (12)0.0330 (12)0.0274 (11)−0.0113 (9)−0.0018 (9)0.0046 (9)
C5A0.0375 (12)0.0256 (11)0.0296 (11)−0.0085 (9)−0.0083 (9)0.0008 (9)
C6A0.0296 (11)0.0303 (12)0.0292 (11)−0.0048 (9)−0.0011 (9)−0.0009 (9)
C12A0.0284 (11)0.0287 (12)0.0360 (12)−0.0096 (9)−0.0049 (9)0.0064 (9)
C13A0.0237 (11)0.0456 (15)0.0264 (11)−0.0012 (10)0.0042 (9)0.0080 (10)
O4B0.0674 (12)0.0357 (10)0.0378 (10)0.0045 (8)0.0049 (8)0.0120 (8)
N1B0.0414 (12)0.0407 (12)0.0338 (11)0.0095 (9)−0.0037 (9)0.0096 (9)
C2B0.0514 (14)0.0278 (13)0.0381 (13)−0.0071 (11)0.0001 (11)−0.0015 (10)
C3B0.0354 (13)0.0572 (17)0.0337 (13)−0.0095 (11)−0.0082 (10)−0.0012 (11)
C5B0.0343 (13)0.0581 (17)0.0367 (13)−0.0181 (11)0.0004 (10)−0.0138 (12)
C6B0.0626 (16)0.0292 (13)0.0433 (14)−0.0040 (12)0.0095 (12)−0.0008 (11)
Cl3A—C3A1.746 (2)C5A—C6A1.377 (3)
Cl5A—C5A1.744 (2)C12A—C13A1.522 (3)
O11A—C1A1.364 (3)C2A—H2A0.9500
O11A—C12A1.421 (3)C4A—H4A0.9500
O13A—C13A1.228 (3)C6A—H6A0.9500
O14A—C13A1.257 (3)C12A—H12A0.9900
O4B—C6B1.416 (3)C12A—H13A0.9900
O4B—C3B1.407 (3)C2B—C3B1.490 (3)
N1B—C2B1.485 (3)C5B—C6B1.489 (3)
N1B—C5B1.477 (3)C2B—H21B0.9900
N1B—H12B0.88 (2)C2B—H22B0.9900
N1B—H11B0.88 (2)C3B—H31B0.9900
C1A—C2A1.384 (3)C3B—H32B0.9900
C1A—C6A1.388 (3)C5B—H51B0.9900
C2A—C3A1.383 (3)C5B—H52B0.9900
C3A—C4A1.370 (3)C6B—H61B0.9900
C4A—C5A1.379 (3)C6B—H62B0.9900
C1A—O11A—C12A120.24 (17)C13A—C12A—H12A109.00
C3B—O4B—C6B109.96 (17)O11A—C12A—H12A109.00
C2B—N1B—C5B111.72 (18)C13A—C12A—H13A109.00
C5B—N1B—H11B114.7 (15)O11A—C12A—H13A109.00
C2B—N1B—H12B112.3 (15)H12A—C12A—H13A108.00
H11B—N1B—H12B105 (2)N1B—C2B—C3B110.27 (19)
C2B—N1B—H11B106.6 (15)O4B—C3B—C2B111.23 (18)
C5B—N1B—H12B106.7 (15)N1B—C5B—C6B109.70 (19)
O11A—C1A—C6A114.67 (18)O4B—C6B—C5B111.47 (19)
C2A—C1A—C6A120.75 (19)N1B—C2B—H21B110.00
O11A—C1A—C2A124.57 (19)N1B—C2B—H22B110.00
C1A—C2A—C3A117.77 (19)C3B—C2B—H21B110.00
Cl3A—C3A—C4A118.09 (16)C3B—C2B—H22B110.00
C2A—C3A—C4A123.29 (19)H21B—C2B—H22B108.00
Cl3A—C3A—C2A118.62 (16)O4B—C3B—H31B109.00
C3A—C4A—C5A117.18 (19)O4B—C3B—H32B109.00
Cl5A—C5A—C6A119.03 (16)C2B—C3B—H31B109.00
Cl5A—C5A—C4A118.85 (16)C2B—C3B—H32B109.00
C4A—C5A—C6A122.1 (2)H31B—C3B—H32B108.00
C1A—C6A—C5A118.84 (19)N1B—C5B—H51B110.00
O11A—C12A—C13A113.95 (18)N1B—C5B—H52B110.00
O14A—C13A—C12A115.08 (19)C6B—C5B—H51B110.00
O13A—C13A—O14A125.4 (2)C6B—C5B—H52B110.00
O13A—C13A—C12A119.5 (2)H51B—C5B—H52B108.00
C3A—C2A—H2A121.00O4B—C6B—H61B109.00
C1A—C2A—H2A121.00O4B—C6B—H62B109.00
C3A—C4A—H4A121.00C5B—C6B—H61B109.00
C5A—C4A—H4A121.00C5B—C6B—H62B109.00
C5A—C6A—H6A121.00H61B—C6B—H62B108.00
C1A—C6A—H6A121.00
C12A—O11A—C1A—C2A−8.1 (3)C1A—C2A—C3A—Cl3A178.48 (16)
C12A—O11A—C1A—C6A172.70 (18)Cl3A—C3A—C4A—C5A−178.43 (16)
C1A—O11A—C12A—C13A−76.5 (2)C2A—C3A—C4A—C5A1.5 (3)
C3B—O4B—C6B—C5B62.3 (2)C3A—C4A—C5A—Cl5A−179.46 (16)
C6B—O4B—C3B—C2B−61.6 (2)C3A—C4A—C5A—C6A0.2 (3)
C2B—N1B—C5B—C6B51.4 (3)C4A—C5A—C6A—C1A−1.8 (3)
C5B—N1B—C2B—C3B−51.2 (3)Cl5A—C5A—C6A—C1A177.83 (16)
C2A—C1A—C6A—C5A1.8 (3)O11A—C12A—C13A—O13A15.0 (3)
O11A—C1A—C2A—C3A−179.44 (19)O11A—C12A—C13A—O14A−167.02 (18)
C6A—C1A—C2A—C3A−0.3 (3)N1B—C2B—C3B—O4B56.1 (2)
O11A—C1A—C6A—C5A−178.92 (19)N1B—C5B—C6B—O4B−56.9 (2)
C1A—C2A—C3A—C4A−1.5 (3)
D—H···AD—HH···AD···AD—H···A
N1B—H11B···O13A0.88 (2)2.07 (2)2.892 (3)156 (2)
N1B—H11B···O14A0.88 (2)2.26 (2)2.988 (3)141 (2)
N1B—H12B···O14Ai0.88 (2)1.87 (2)2.737 (3)170 (2)
C12A—H12A···O13Aii0.992.413.398 (3)173
C4H10NO+·C8H5Cl2O3F(000) = 640
Mr = 308.15Dx = 1.456 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2359 reflections
a = 9.3657 (5) Åθ = 3.6–28.4°
b = 7.1702 (3) ŵ = 0.47 mm1
c = 21.1340 (11) ÅT = 200 K
β = 97.981 (5)°Plate, colourless
V = 1405.48 (12) Å30.35 × 0.35 × 0.12 mm
Z = 4
Oxford Diffraction Gemini-S CCD-detector diffractometer2754 independent reflections
Radiation source: Enhance (Mo) X-ray source2273 reflections with I.2σ(I)
Graphite monochromatorRint = 0.026
Detector resolution: 16.077 pixels mm-1θmax = 26.0°, θmin = 3.4°
ω scansh = −9→11
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2014)k = −8→8
Tmin = 0.933, Tmax = 0.980l = −26→20
6400 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.091H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0405P)2 + 0.3419P] where P = (Fo2 + 2Fc2)/3
2754 reflections(Δ/σ)max < 0.001
178 parametersΔρmax = 0.28 e Å3
2 restraintsΔρmin = −0.26 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl2A0.23659 (5)0.74483 (6)0.41042 (2)0.0354 (2)
Cl4A0.15479 (6)0.32605 (9)0.19759 (2)0.0500 (2)
O11A0.13251 (13)0.42531 (17)0.47171 (6)0.0276 (4)
O13A0.34279 (13)0.1659 (2)0.50395 (7)0.0390 (5)
O14A0.19747 (12)−0.01154 (18)0.55307 (6)0.0313 (4)
C1A0.13210 (17)0.3923 (3)0.40846 (8)0.0236 (5)
C2A0.18091 (18)0.5368 (3)0.37274 (9)0.0255 (5)
C3A0.18796 (19)0.5185 (3)0.30830 (9)0.0305 (6)
C4A0.14433 (19)0.3520 (3)0.27899 (9)0.0319 (6)
C5A0.0933 (2)0.2087 (3)0.31247 (10)0.0348 (6)
C6A0.08662 (19)0.2287 (3)0.37705 (9)0.0306 (6)
C12A0.10285 (19)0.2707 (3)0.51091 (9)0.0270 (6)
C13A0.22590 (18)0.1309 (2)0.52275 (8)0.0226 (5)
O4B0.56703 (19)0.3986 (3)0.31170 (7)0.0591 (6)
N1B0.55499 (17)0.2047 (2)0.42729 (8)0.0293 (5)
C2B0.5720 (2)0.4092 (3)0.42590 (10)0.0353 (7)
C3B0.6444 (3)0.4633 (3)0.37002 (11)0.0509 (8)
C5B0.5609 (3)0.2016 (4)0.31253 (11)0.0541 (9)
C6B0.4830 (2)0.1326 (3)0.36568 (11)0.0412 (7)
H3A0.222000.617800.284700.0370*
H5A0.062600.095800.291300.0420*
H6A0.050600.129500.400100.0370*
H12A0.015500.205600.490200.0320*
H13A0.081800.318800.552600.0320*
H11B0.6420 (17)0.149 (3)0.4381 (9)0.0350*
H12B0.507 (2)0.180 (3)0.4587 (8)0.0350*
H21B0.630500.451700.465900.0420*
H22B0.476300.469700.422700.0420*
H31B0.652500.600900.368500.0610*
H32B0.743000.410800.375300.0610*
H51B0.660100.150500.318200.0650*
H52B0.510600.156300.271100.0650*
H61B0.381500.175400.358500.0490*
H62B0.48330−0.005400.366300.0490*
U11U22U33U12U13U23
Cl2A0.0474 (3)0.0221 (3)0.0376 (3)−0.0043 (2)0.0088 (2)0.0006 (2)
Cl4A0.0576 (4)0.0620 (4)0.0312 (3)0.0069 (3)0.0087 (2)−0.0094 (3)
O11A0.0339 (7)0.0222 (7)0.0274 (7)0.0037 (6)0.0072 (5)0.0055 (6)
O13A0.0247 (7)0.0429 (9)0.0524 (9)0.0066 (6)0.0162 (6)0.0154 (7)
O14A0.0291 (7)0.0282 (7)0.0368 (8)0.0031 (6)0.0056 (6)0.0117 (6)
C1A0.0202 (8)0.0236 (9)0.0265 (10)0.0059 (7)0.0019 (7)0.0052 (8)
C2A0.0228 (9)0.0222 (9)0.0315 (10)0.0032 (8)0.0036 (7)0.0015 (8)
C3A0.0290 (10)0.0325 (11)0.0307 (11)0.0034 (9)0.0063 (8)0.0071 (9)
C4A0.0295 (10)0.0386 (12)0.0268 (10)0.0064 (9)0.0010 (8)−0.0019 (9)
C5A0.0328 (10)0.0302 (11)0.0389 (12)−0.0021 (9)−0.0040 (9)−0.0053 (9)
C6A0.0283 (10)0.0260 (10)0.0363 (11)−0.0026 (8)0.0003 (8)0.0041 (9)
C12A0.0259 (9)0.0278 (10)0.0288 (10)0.0031 (8)0.0090 (7)0.0080 (8)
C13A0.0236 (9)0.0225 (9)0.0214 (9)0.0011 (8)0.0025 (7)−0.0005 (8)
O4B0.0774 (12)0.0641 (12)0.0344 (9)−0.0058 (10)0.0026 (8)0.0203 (9)
N1B0.0245 (8)0.0311 (9)0.0338 (9)0.0047 (7)0.0089 (7)0.0114 (8)
C2B0.0385 (11)0.0292 (11)0.0367 (12)0.0044 (9)0.0001 (9)0.0014 (9)
C3B0.0611 (15)0.0443 (14)0.0466 (14)−0.0155 (12)0.0046 (11)0.0164 (12)
C5B0.0596 (15)0.0678 (18)0.0337 (13)0.0014 (14)0.0025 (11)−0.0126 (13)
C6B0.0362 (11)0.0337 (12)0.0524 (14)−0.0035 (10)0.0012 (10)−0.0015 (10)
Cl2A—C2A1.737 (2)C5A—C6A1.382 (3)
Cl4A—C4A1.7466 (19)C12A—C13A1.522 (3)
O11A—C1A1.357 (2)C3A—H3A0.9500
O11A—C12A1.434 (2)C5A—H5A0.9500
O13A—C13A1.241 (2)C6A—H6A0.9500
O14A—C13A1.254 (2)C12A—H12A0.9900
O4B—C5B1.414 (4)C12A—H13A0.9900
O4B—C3B1.418 (3)C2B—C3B1.492 (3)
N1B—C2B1.476 (3)C5B—C6B1.506 (3)
N1B—C6B1.474 (3)C2B—H21B0.9900
N1B—H12B0.870 (18)C2B—H22B0.9900
N1B—H11B0.908 (18)C3B—H31B0.9900
C1A—C2A1.396 (3)C3B—H32B0.9900
C1A—C6A1.386 (3)C5B—H51B0.9900
C2A—C3A1.379 (3)C5B—H52B0.9900
C3A—C4A1.380 (3)C6B—H61B0.9900
C4A—C5A1.371 (3)C6B—H62B0.9900
C1A—O11A—C12A117.39 (15)C13A—C12A—H12A109.00
C3B—O4B—C5B109.44 (17)O11A—C12A—H12A109.00
C2B—N1B—C6B111.61 (16)C13A—C12A—H13A109.00
C6B—N1B—H11B110.6 (12)O11A—C12A—H13A109.00
C2B—N1B—H12B106.6 (14)H12A—C12A—H13A108.00
H11B—N1B—H12B105.0 (17)N1B—C2B—C3B109.65 (17)
C2B—N1B—H11B110.3 (13)O4B—C3B—C2B111.7 (2)
C6B—N1B—H12B112.4 (12)O4B—C5B—C6B111.2 (2)
O11A—C1A—C6A125.33 (17)N1B—C6B—C5B109.52 (17)
C2A—C1A—C6A118.12 (16)N1B—C2B—H21B110.00
O11A—C1A—C2A116.55 (17)N1B—C2B—H22B110.00
C1A—C2A—C3A121.85 (19)C3B—C2B—H21B110.00
Cl2A—C2A—C3A118.83 (16)C3B—C2B—H22B110.00
Cl2A—C2A—C1A119.32 (14)H21B—C2B—H22B108.00
C2A—C3A—C4A118.28 (19)O4B—C3B—H31B109.00
C3A—C4A—C5A121.29 (18)O4B—C3B—H32B109.00
Cl4A—C4A—C3A118.72 (15)C2B—C3B—H31B109.00
Cl4A—C4A—C5A119.99 (16)C2B—C3B—H32B109.00
C4A—C5A—C6A119.92 (19)H31B—C3B—H32B108.00
C1A—C6A—C5A120.52 (18)O4B—C5B—H51B109.00
O11A—C12A—C13A113.66 (14)O4B—C5B—H52B109.00
O14A—C13A—C12A114.26 (15)C6B—C5B—H51B109.00
O13A—C13A—O14A126.00 (15)C6B—C5B—H52B109.00
O13A—C13A—C12A119.72 (15)H51B—C5B—H52B108.00
C4A—C3A—H3A121.00N1B—C6B—H61B110.00
C2A—C3A—H3A121.00N1B—C6B—H62B110.00
C4A—C5A—H5A120.00C5B—C6B—H61B110.00
C6A—C5A—H5A120.00C5B—C6B—H62B110.00
C5A—C6A—H6A120.00H61B—C6B—H62B108.00
C1A—C6A—H6A120.00
C12A—O11A—C1A—C2A−171.22 (15)C6A—C1A—C2A—C3A−1.6 (3)
C12A—O11A—C1A—C6A9.2 (2)Cl2A—C2A—C3A—C4A179.56 (14)
C1A—O11A—C12A—C13A72.91 (19)C1A—C2A—C3A—C4A0.4 (3)
C5B—O4B—C3B—C2B−61.7 (2)C2A—C3A—C4A—Cl4A−179.24 (14)
C3B—O4B—C5B—C6B61.5 (3)C2A—C3A—C4A—C5A0.9 (3)
C6B—N1B—C2B—C3B−52.8 (2)Cl4A—C4A—C5A—C6A179.27 (15)
C2B—N1B—C6B—C5B52.8 (2)C3A—C4A—C5A—C6A−0.9 (3)
O11A—C1A—C6A—C5A−178.82 (17)C4A—C5A—C6A—C1A−0.5 (3)
C2A—C1A—C6A—C5A1.6 (3)O11A—C12A—C13A—O13A6.5 (2)
O11A—C1A—C2A—C3A178.80 (16)O11A—C12A—C13A—O14A−175.12 (14)
C6A—C1A—C2A—Cl2A179.20 (14)N1B—C2B—C3B—O4B57.1 (2)
O11A—C1A—C2A—Cl2A−0.4 (2)O4B—C5B—C6B—N1B−57.3 (2)
D—H···AD—HH···AD···AD—H···A
N1B—H11B···O13Ai0.91 (2)2.56 (2)3.115 (2)120 (1)
N1B—H11B···O14Ai0.91 (2)1.79 (2)2.683 (2)169 (2)
N1B—H12B···O13A0.87 (2)1.92 (2)2.747 (2)158 (2)
C12A—H12A···O14Aii0.992.503.484 (2)173
C2B—H21B···O11Aiii0.992.573.477 (2)151
C5B—H52B···O4Biv0.992.583.489 (3)153
  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Morpholinium 2-chloro-4-nitrobenzoate, 2-chloro-5-nitrobenzoate and 4-chloro-3-nitrobenzoate.

Authors:  H Ishida; B Rahman; S Kashino
Journal:  Acta Crystallogr C       Date:  2001-12-06       Impact factor: 1.172

3.  Ammonium 2-(2,4-dichloro-phen-oxy)acetate hemihydrate.

Authors:  Hui-Lian Liu; Shu-Hua Guo; Yun-Ying Li; Fang-Fang Jian
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-18

4.  Two-dimensional hydrogen-bonded polymers in the crystal structures of the ammonium salts of phen-oxy-acetic acid, (4-fluoro-phen-oxy)acetic acid and (4-chloro-2-methyl-phen-oxy)acetic acid.

Authors:  Graham Smith
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-11-19

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

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