Literature DB >> 26594516

Crystal structure of the new hybrid material bis-(1,4-diazo-niabi-cyclo-[2.2.2]octa-ne) di-μ-chlorido-bis-[tetra-chlorido-bis-muthate(III)] dihydrate.

Marwen Chouri1, Habib Boughzala1.   

Abstract

The title compound bis-(1,4-diazo-niabi-cyclo-[2.2.2]octa-ne) di-μ-chlorido-bis-[tetra-chlorido-bis-muthate(III)] dihydrate, (C6H14N2)2[Bi2Cl102H2O, was ob-tain-ed by slow evaporation at room temperature of a hydro-chloric aqueous solution (pH = 1) containing bis-muth(III) nitrate and 1,4-di-aza-bicyclo-[2.2.2]octane (DABCO) in a 1:2 molar ratio. The structure displays a two-dimensional arrangement parallel to (100) of isolated [Bi2Cl10](4-) bi-octa-hedra (site symmetry -1) separated by layers of organic 1,4-diazo-niabi-cyclo-[2.2.2]octane dications [(DABCOH2)(2+)] and water mol-ecules. O-H⋯Cl, N-H⋯O and N-H⋯Cl hydrogen bonds lead to additional cohesion of the structure.

Entities:  

Keywords:  DABCO; crystal structure; hybrid material

Year:  2015        PMID: 26594516      PMCID: PMC4645089          DOI: 10.1107/S2056989015019933

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

In recent years, many new organic–inorganic hybrid com­pounds have been synthesized because of their inter­esting physical behaviour and applications in optoelectronics (Jakubas & Sobczyk, 1990 ▸). The main inter­esting optical activity observed in this kind of compounds is generally the result of the presence of an active ns 2 lone pair (Chaabouni et al., 1998 ▸) in the inorganic parts. It can also be the result of an important structural distortion in the organic cations (Ishihara et al., 1990 ▸; Lacroix et al., 1994 ▸). The combination of the particular properties of the organic and inorganic moieties can induce inter­esting new properties. In particular for the halogenated bis­muth or anti­mony anionic networks (Ahmed et al., 2001 ▸; Jakubas et al., 2005 ▸), the anionic arrangement leads to four kinds of dimensionalities: quantum dots (zero-di­men­sional, 0D) observed in hybrids such as (C6H14N2)2[Sb2Cl10]·2H2O (Ben Rhaiem et al., 2013 ▸), quantum wires (one-dimensional, 1D) as is the case in the structure of (C2H7N4O)2 [BiCl5] (Ferjani et al., 2012 ▸), quantum wells (two-dimensional, 2D) and a bulk (three-dimensional, 3D) topology. The organic cations are usually filling the empty space left by the inorganic network. Here we report the structure of a new hybrid bis­muthate compounds having a 0D dimensionality with respect to its inorganic part.

Structural commentary

The structural unit (Fig. 1 ▸) of the compound is built up by an isolated dimeric decchlorido­bis­muthate(III) [Bi2Cl10]4− anion, two organic 1,4-diazo­niabi­cyclo­[2.2.2]octane dications [(DABCOH2)2+] and two water mol­ecules. These components are linked by strong hydrogen bonds. The inorganic moiety is an edge-sharing di­octa­hedron located site with symmetry . The two (DABCOH2)2+ dications (Fig. 4 ▸) in the structural unit are related to the dimeric [Bi2Cl10]4− units by means of N2—H2Cl2 and N2—H2Cl1 inter­actions.
Figure 1

Plot of the mol­ecular entities of (C6H14N2)2[Bi2Cl10]. 2H2O, showing the atom numbering scheme. Atomic displacement ellipsoids are drawn at the 50% probability level and H atoms are shown as small spheres of arbitrary radius. [Symmetry codes: (i) −x + 1, −y + 1, −z + 1; (ii) −x + 2, y + 0.5, −z + 0.5; (iii) x − 1, −y + 0.5, z + 0.5.]

Figure 4

Hydrogen-bonding environment of the cationic organic part of the title compound.

The bond lengths and angles of the dication are within normal ranges and are comparable to those observed in similar structures. Table 1 ▸ summarizes the most important distances in these mol­ecules. The CN bond lengths vary from 1.479 (11) to 1.508 (12) Å. The CC bond lengths vary from 1.500 (13) to 1.535 (13) Å. The angles in this mol­ecule are between 109.8 (7) and 110.7 (8)° for CNC and between 108.1 (8) and 109.2 (8)° for NCC.
Table 1

Selected geometric parameters ()

BiCl52.588(2)N1C51.504(9)
BiCl32.601(2)N2C41.489(10)
BiCl22.6611(19)N2C21.492(9)
BiCl42.704(2)N2C61.494(10)
BiCl12.8610(19)C1C21.517(11)
BiCl1i 2.884(2)C6C51.531(11)
N1C11.485(9)C3C41.493(11)
N1C31.503(9)  

Symmetry code: (i) .

As listed in Table 1 ▸, the bond lengths of bis­muth to terminal chlorides [2.587 (5)–2.704 (5) Å] are shorter than the bridging ones [2.863 (4) and 2.884 (4) Å]. The Cl—BiCl angles vary from 84.46 (12) to 95.4 (2)° for the cis and 173.25 (15) to 176.64 (15)° for the trans arrangement. Using Shannon’s method (Shannon, 1976 ▸), the distortion index of 1.87 (9) × 10−3 reveals only a small distortion in the BiCl6 octa­hedron. The bis­muth 6s 2 electron pair has stereochemical activity and the hydrogen-bond orientation can be related to the bis­muth polyhedra distortion. The final Fourier difference map reveals four large peaks at approximately 1 Å from the bis­muth atom that can be attributed to the delocalization of the 6s 2 electron pair as is the case in most other bis­muth-based structures. The (C6H14N2)2[Bi2Cl102H2O structure is very close to that of (C6H14N2)2[Sb2Cl10]·2H2O (Ben Rhaiem et al., 2013 ▸). The cell parameters of both structures can be compared after making a necessary transformation (cba) in the Pnnm anti­mony unit cell to be comparable to the bis­muth one (Table 2 ▸). Apart from the higher symmetry of the anti­mony structure, an important distortion is noted in the SbCl6 octa­hedra confirmed by the Shannon’s distortion index (Shannon,1976 ▸) [6.20 (9) × 10−3], more than three times larger than the one for the title bis­muth compound [1.87 (9) × 10−3] . It is worth noting that the water mol­ecule plays a more efficient role in the bis­muth based compound. In (C6H14N2)2[Sb2Cl10]·2H2O, the H2O mol­ecules are only linked to (DABCOH2)2+ and in the (C6H14N2)2[Bi2Cl102H2O structure they are directly hydrogen bonded to both the organic and inorganic parts (Fig. 3 ▸). The atomic radius of bis­muth is larger than that for anti­mony, and thus an increase of the cell volume is expected. In fact, the main increase is observed for the c axis [13.99 (2) Å] because the metallic coordination polyhedra are aligned along this axis. On the other hand, a roughly equivalent decrease of the b parameter is observed causing the unit-cell volume of the two compounds approximately to be the same. A general comparison of the two structures reveals that they have a similar 3D pattern, built up by isolated bi­octa­hedra, (DABCOH2)2+ cations and water mol­ecules leaving empty the same voids. On the other hand, the water mol­ecule immediate environment is more regular in the Sb structure (Fig. 3 ▸ b) and the (DABCOH2)2+ cation is more distorted in the Bi structure (Fig. 3 ▸ a) explaining the lowering of the symmetry in the title compound.
Table 2

Comparison of the cell parameters of the structures of [Bi2Cl10](C6H14N2)22H2O and [Sb2Cl10](C6H14N2)22H2O.

 [Bi2Cl10](C6H14N2)22H2O[Sb2Cl10](C6H14N2)22H2OParameter variation (%) [(X Bi X Sb)/(X Sb)]100
Crystal systemmonoclinicorthorhombic-
Space group P21/c Pnnm Pnmn (cba)-
a ()7.875(3)9.162(1) => 7.566(2)4.08(2)
b ()18.379(5)20.689(7) => 20.689(7)11.16(3)
c ()10.444(4)7.566(2) => 9.162(1)13.99(2)
()105.95(3)90.00-
V (3)1453.4(9)1446.8(7)0.45(7)
Figure 3

Water-mol­ecule hydrogen-bonding inter­action between organic and inorganic parts: (a) in the title compound [symmetry codes: (i) x + 1, −y + 0.5, z − 0.5; (ii) x, −y + 0.5, z + 0.5]; (b) in the structure of (C6H14N2)2[Sb2Cl10]·2H2O

Supra­molecular features

As shown in Fig. 2 ▸, every anionic unit is linked to four water mol­ecules and two organic cations. The water mol­ecules (Fig. 3 ▸) are strongly hydrogen bonded to the inorganic part by means of O—HW1⋯Cl5ii [symmetry code: (ii) x, −y + 0.5, z + 0.5] and O—HW2⋯Cl5 inter­actions. The DABCO cations are hydrogen bonded to water mol­ecules, leading to chains composed of organic moieties, inorganic clusters and H2O mol­ecules running along the b direction (Fig. 1 ▸). The water mol­ecules stabilize the structure by playing a bridge role between organic and inorganic parts. Furthermore, they ensure the link in the other directions leading to a hydrogen-bond-based three-dimensional network. The structure can be seen (Fig. 5 ▸) as an alternation of organic and inorganic layers parallel to (100) which are linked by a strong hydrogen-bond pattern (Table 3 ▸).
Figure 2

Hydrogen-bonding environment of the anionic part of the structure. [Symmetry codes: (i) −x + 1, −y + 1, −z + 1; (ii) −x + 1, −y + 1, −z + 1.5; (iii) x, −y + 0.5, z − 0.5.]

Figure 5

Projection of the crystal structure of the bis­muthate hybrid compound along the c axis, showing the alternation of organic and inorganic layers.

Table 3

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
OwHw2Cl50.912.633.458(8)163
N1H1Owii 0.911.872.739(10)159
OwHw1Cl5iii 0.912.803.475(9)138
N2H2Cl10.912.733.352(6)127
N2H2Cl20.912.653.325(7)132

Symmetry codes: (ii) ; (iii) .

Synthesis and crystallization

(C6H14N2)2[Bi2Cl102H2O crystals were obtained at ambient conditions by dissolving Bi(NO3)3·5H2O and DABCO (C6H12N2) in water in a 1:2 molar ratio. The pH of the solution was adjusted to 1 with HCl. The mixture was stirred and kept for several days. Colourless crystals were obtained after a few weeks.

Refinement

Crystal data, data collection and structure refinement details are summarized in Table 4 ▸. The isotropic displacement parameter of the hydrogen atoms for the water mol­ecule were fixed to be restrained to be approximately 1.5 times those of the parent atom and the water mol­ecule geometries were regularised using distance restraints
Table 4

Experimental details

Crystal data
Chemical formula(C6H14N2)2[Bi2Cl10]2H2O
M r 1036.88
Crystal system, space groupMonoclinic, P21/c
Temperature (K)293
a, b, c ()7.875(3), 18.379(5), 10.444(4)
()105.95(3)
V (3)1453.4(9)
Z 2
Radiation typeMo K
(mm1)13.03
Crystal size (mm)0.5 0.3 0.2
 
Data collection
DiffractometerEnrafNonius CAD-4
Absorption correction scan (North et al., 1968)
T min, T max 0.013, 0.074
No. of measured, independent and observed [I > 2(I)] reflections3159, 3159, 2681
R int 0.035
(sin /)max (1)0.638
 
Refinement
R[F 2 > 2(F 2)], wR(F 2), S 0.036, 0.102, 1.06
No. of reflections3159
No. of parameters142
No. of restraints2
H-atom treatmentH atoms treated by a mixture of independent and constrained refinement
max, min (e 3)3.48, 2.57

Computer programs: CAD-4 EXPRESS (EnrafNonius, 1994 ▸), XCAD4 (Harms Wocadlo, 1995 ▸), SHELXS97 (Sheldrick, 2008 ▸), SHELXL2014 (Sheldrick, 2015 ▸), DIAMOND (Brandenburg, 2006 ▸) and publCIF (Westrip, 2010 ▸).

Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989015019933/vn2102sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015019933/vn2102Isup2.hkl CCDC reference: 971956 Additional supporting information: crystallographic information; 3D view; checkCIF report
(C6H14N2)2[Bi2Cl10]·2H2OF(000) = 968
Mr = 1036.88Dx = 2.369 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 7.875 (3) ÅCell parameters from 3158 reflections
b = 18.379 (5) Åθ = 2.2–2.7°
c = 10.444 (4) ŵ = 13.03 mm1
β = 105.95 (3)°T = 293 K
V = 1453.4 (9) Å3Prism, colourless
Z = 20.5 × 0.3 × 0.2 mm
Enraf–Nonius CAD-4 diffractometer2681 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.035
Graphite monochromatorθmax = 27.0°, θmin = 2.2°
ω/2θ scansh = −10→1
Absorption correction: ψ scan North et al. (1968). Number of ψ scan sets used was 5 Theta correction was applied. Averaged transmission function was used. No Fourier smoothing was applied.k = −1→23
Tmin = 0.013, Tmax = 0.074l = −12→13
3159 measured reflections2 standard reflections every 120 min
3159 independent reflections intensity decay: 10%
Refinement on F22 restraints
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.036H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.102w = 1/[σ2(Fo2) + (0.0625P)2 + 4.4831P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
3159 reflectionsΔρmax = 3.48 e Å3
142 parametersΔρmin = −2.57 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
Bi0.42097 (3)0.42073 (2)0.34670 (2)0.02518 (11)
Cl10.2576 (2)0.50934 (10)0.50438 (18)0.0329 (4)
Cl20.4635 (3)0.32483 (10)0.54389 (18)0.0361 (4)
Cl30.1117 (3)0.36755 (11)0.2279 (2)0.0441 (5)
Cl40.3821 (3)0.52442 (12)0.1571 (2)0.0438 (5)
Cl50.5941 (4)0.33648 (14)0.2288 (3)0.0635 (7)
OW0.7852 (9)0.2151 (4)0.4798 (8)0.0609 (18)
HW10.701 (11)0.194 (6)0.501 (12)0.070*
HW20.732 (14)0.251 (4)0.434 (10)0.070*
N10.0157 (8)0.3538 (3)0.8660 (6)0.0291 (12)
H1−0.06680.34050.91730.035*
N20.2250 (8)0.3886 (3)0.7369 (6)0.0319 (13)
H20.30820.40260.68660.038*
C10.1780 (10)0.3089 (4)0.9111 (8)0.0340 (16)
H1A0.15130.25840.88670.041*
H1B0.22380.31171.00720.041*
C60.0703 (11)0.3511 (5)0.6456 (7)0.0403 (19)
H6A0.10620.30450.61790.048*
H6B0.02240.38050.56680.048*
C30.0613 (10)0.4331 (4)0.8868 (8)0.0344 (16)
H3A−0.04570.46180.87080.041*
H3B0.13100.44130.97780.041*
C40.1641 (11)0.4551 (4)0.7924 (8)0.0385 (17)
H4A0.09040.48410.72090.046*
H4B0.26500.48430.83860.046*
C5−0.0695 (11)0.3398 (5)0.7206 (7)0.0386 (17)
H5A−0.16730.37310.68740.046*
H5B−0.11470.29050.70780.046*
C20.3144 (11)0.3374 (4)0.8454 (8)0.0385 (17)
H2A0.40780.36250.91050.046*
H2B0.36630.29730.80900.046*
U11U22U33U12U13U23
Bi0.02361 (17)0.02675 (16)0.02414 (16)−0.00230 (9)0.00482 (11)−0.00228 (8)
Cl10.0253 (8)0.0374 (9)0.0354 (9)0.0006 (7)0.0073 (7)0.0026 (7)
Cl20.0343 (9)0.0360 (9)0.0374 (9)0.0016 (7)0.0087 (7)0.0066 (7)
Cl30.0352 (10)0.0522 (11)0.0396 (10)−0.0140 (9)0.0011 (8)0.0003 (8)
Cl40.0282 (9)0.0570 (12)0.0434 (10)−0.0072 (8)0.0052 (8)0.0165 (9)
Cl50.0703 (16)0.0640 (15)0.0643 (15)0.0110 (12)0.0319 (13)−0.0197 (12)
OW0.045 (4)0.073 (5)0.067 (5)0.017 (3)0.019 (3)−0.016 (4)
N10.024 (3)0.037 (3)0.030 (3)−0.001 (2)0.013 (2)−0.002 (2)
N20.027 (3)0.035 (3)0.037 (3)0.003 (2)0.016 (3)0.005 (3)
C10.032 (4)0.034 (4)0.036 (4)0.010 (3)0.009 (3)0.011 (3)
C60.044 (5)0.054 (5)0.021 (3)0.002 (4)0.005 (3)−0.003 (3)
C30.032 (4)0.030 (3)0.043 (4)0.002 (3)0.012 (3)−0.007 (3)
C40.038 (4)0.030 (4)0.050 (5)−0.003 (3)0.017 (4)0.001 (3)
C50.033 (4)0.050 (4)0.028 (4)−0.005 (3)−0.001 (3)−0.005 (3)
C20.034 (4)0.041 (4)0.040 (4)0.012 (3)0.010 (3)0.014 (3)
Bi—Cl52.588 (2)N2—H20.9800
Bi—Cl32.601 (2)C1—C21.517 (11)
Bi—Cl22.6611 (19)C1—H1A0.9700
Bi—Cl42.704 (2)C1—H1B0.9700
Bi—Cl12.8610 (19)C6—C51.531 (11)
Bi—Cl1i2.884 (2)C6—H6A0.9700
Cl1—Bii2.884 (2)C6—H6B0.9700
OW—HW10.850 (10)C3—C41.493 (11)
OW—HW20.850 (10)C3—H3A0.9700
N1—C11.485 (9)C3—H3B0.9700
N1—C31.503 (9)C4—H4A0.9700
N1—C51.504 (9)C4—H4B0.9700
N1—H10.9800C5—H5A0.9700
N2—C41.489 (10)C5—H5B0.9700
N2—C21.492 (9)C2—H2A0.9700
N2—C61.494 (10)C2—H2B0.9700
Cl5—Bi—Cl395.45 (9)C2—C1—H1B110.0
Cl5—Bi—Cl290.07 (8)H1A—C1—H1B108.4
Cl3—Bi—Cl291.28 (7)N2—C6—C5108.1 (6)
Cl5—Bi—Cl492.39 (9)N2—C6—H6A110.1
Cl3—Bi—Cl490.73 (7)C5—C6—H6A110.1
Cl2—Bi—Cl4176.66 (6)N2—C6—H6B110.1
Cl5—Bi—Cl1173.58 (7)C5—C6—H6B110.1
Cl3—Bi—Cl188.74 (7)H6A—C6—H6B108.4
Cl2—Bi—Cl184.97 (6)C4—C3—N1108.6 (6)
Cl4—Bi—Cl192.41 (7)C4—C3—H3A110.0
Cl5—Bi—Cl1i91.38 (8)N1—C3—H3A110.0
Cl3—Bi—Cl1i173.16 (6)C4—C3—H3B110.0
Cl2—Bi—Cl1i88.44 (6)N1—C3—H3B110.0
Cl4—Bi—Cl1i89.25 (6)H3A—C3—H3B108.4
Cl1—Bi—Cl1i84.43 (6)N2—C4—C3109.0 (6)
Bi—Cl1—Bii95.57 (6)N2—C4—H4A109.9
HW1—OW—HW2102 (10)C3—C4—H4A109.9
C1—N1—C3110.0 (6)N2—C4—H4B109.9
C1—N1—C5109.4 (6)C3—C4—H4B109.9
C3—N1—C5109.5 (6)H4A—C4—H4B108.3
C1—N1—H1109.3N1—C5—C6108.0 (6)
C3—N1—H1109.3N1—C5—H5A110.1
C5—N1—H1109.3C6—C5—H5A110.1
C4—N2—C2110.9 (6)N1—C5—H5B110.1
C4—N2—C6109.5 (6)C6—C5—H5B110.1
C2—N2—C6109.1 (6)H5A—C5—H5B108.4
C4—N2—H2109.1N2—C2—C1108.5 (6)
C2—N2—H2109.1N2—C2—H2A110.0
C6—N2—H2109.1C1—C2—H2A110.0
N1—C1—C2108.6 (5)N2—C2—H2B110.0
N1—C1—H1A110.0C1—C2—H2B110.0
C2—C1—H1A110.0H2A—C2—H2B108.4
N1—C1—H1B110.0
D—H···AD—HH···AD···AD—H···A
Ow—Hw2···Cl50.912.633.458 (8)163
N1—H1···Owii0.911.872.739 (10)159
Ow—Hw1···Cl5iii0.912.803.475 (9)138
N2—H2···Cl10.912.733.352 (6)127
N2—H2···Cl20.912.653.325 (7)132
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