| Literature DB >> 26594497 |
Elena A Buvaylo1, Olga Yu Vassilyeva1, Brian W Skelton2.
Abstract
The title compound, [Mn(C12H15NO5)2]·0.39H2O, is a 0.39 hydrate of the isostructural complex bis-(2-{[1,1-bis-(hy-droxy-meth-yl)-2-oxidoeth-yl]imino-meth-yl}-6-meth-oxy-phenolato)manganese(IV) that has previously been reported by Back, Oliveira, Canabarro & Iglesias [Z. Anorg. Allg. Chem. (2015), 641, 941-947], based on room-temperature data. The current structure that was determined at 100 K reveals a lengthening of the c cell parameter compared with the published one due to the incorporation of the partial occupancy water mol-ecule. The title compound crystallizes in the tetra-gonal chiral space group P41212; the neutral [Mn(IV)(C12H15NO5)2] mol-ecule is situated on a crystallographic C 2 axis. The overall geometry about the central manganese ion is octa-hedral with an N2O4 core; each ligand acts as a meridional ONO donor. The coordination environment of Mn(IV) at 100 K displays a difference in one of the two Mn-O bond lengths, compared with the room-temperature structure. In the crystal, the neutral mol-ecules are stacked in a helical fashion along the c-axis direction.Entities:
Keywords: Schiff base ligand; crystal structure; monomeric octahedral MnIV complex; o-vanillin; tris(hydroxymethyl)aminomethane
Year: 2015 PMID: 26594497 PMCID: PMC4645066 DOI: 10.1107/S2056989015018551
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The molecular structure of the title complex, showing the atom-numbering scheme. Non-H atoms are shown with displacement ellipsoids at the 50% probability level. Labelled atoms are related to unlabelled atoms by the symmetry operation y, x, −z + 1.
Selected geometric parameters (, )
| Mn1O111 | 1.871(4) | Mn1N10 | 1.992(5) |
| Mn1O11 | 1.939(4) | ||
| O111Mn1O111i | 94.0(3) | O111iMn1N10 | 88.07(19) |
| O111Mn1O11i | 89.58(16) | O11iMn1N10 | 98.44(18) |
| O111Mn1O11 | 172.89(18) | O11Mn1N10 | 89.82(17) |
| O11iMn1O11 | 87.6(2) | N10Mn1N10i | 168.6(3) |
| O111Mn1N10 | 84.14(18) |
Symmetry code: (i) .
Figure 2Scheme showing the structure of the closely related ROMROB MnII complex.
Figure 3Crystal packing of (1) showing the helical arrangement of MnIV(H2 L)2 molecules in the c-axis direction. H atoms are not shown.
Hydrogen-bond geometry (, )
|
|
| H |
|
|
|---|---|---|---|---|
| O112H112O11ii | 0.84 | 2.2 | 2.850(7) | 134 |
| O112H112O16ii | 0.84 | 2.1 | 2.802(7) | 141 |
| O113H113O112iii | 0.84 | 2.3 | 2.965(12) | 137 |
Symmetry codes: (ii) ; (iii) .
Experimental details
| Crystal data | |
| Chemical formula | [Mn(C12H15NO5)2]0.39H2O |
|
| 568.46 |
| Crystal system, space group | Tetragonal, |
| Temperature (K) | 100 |
|
| 8.0953(2), 37.568(2) |
|
| 2461.97(18) |
|
| 4 |
| Radiation type | Cu |
| (mm1) | 4.92 |
| Crystal size (mm) | 0.09 0.08 0.01 |
| Data collection | |
| Diffractometer | Oxford Diffraction Gemini |
| Absorption correction | Analytical [ |
|
| 0.695, 0.946 |
| No. of measured, independent and observed [ | 18553, 2214, 1885 |
|
| 0.103 |
| (sin /)max (1) | 0.600 |
| Refinement | |
|
| 0.052, 0.136, 1.05 |
| No. of reflections | 2214 |
| No. of parameters | 181 |
| H-atom treatment | H-atom parameters constrained |
| max, min (e 3) | 0.54, 0.34 |
| Absolute structure | Flack |
| Absolute structure parameter | 0.007(6) |
Computer programs: CrysAlis PRO (Agilent, 2014 ▸), SIR92 (Altomare et al., 1993 ▸), SHELXL2014 (Sheldrick, 2015 ▸), DIAMOND (Brandenburg, 1999 ▸) and WinGX (Farrugia, 2012 ▸).
| [Mn(C12H15NO5)2]·0.39H2O | |
| Cu | |
| Tetragonal, | Cell parameters from 2851 reflections |
| Hall symbol: P 4abw 2nw | θ = 3.5–67.6° |
| µ = 4.92 mm−1 | |
| Plate, black | |
| 0.09 × 0.08 × 0.01 mm | |
| Oxford Diffraction Gemini diffractometer | 2214 independent reflections |
| Graphite monochromator | 1885 reflections with |
| Detector resolution: 10.4738 pixels mm-1 | |
| ω scans | θmax = 67.7°, θmin = 4.7° |
| Absorption correction: analytical [ | |
| 18553 measured reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.54 e Å−3 | |
| 2214 reflections | Δρmin = −0.34 e Å−3 |
| 181 parameters | Absolute structure: Flack |
| 0 restraints | Absolute structure parameter: −0.007 (6) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. The solvent was modelled as a water molecule with a site occupancy refined to 0.195 (15). Associated hydrogen atoms were not located. |
| Occ. (<1) | |||||
| Mn1 | 0.68511 (10) | 0.68511 (10) | 0.5 | 0.0286 (3) | |
| C11 | 0.6187 (6) | 0.4968 (6) | 0.56423 (15) | 0.0308 (12) | |
| O11 | 0.5567 (4) | 0.5690 (5) | 0.53567 (9) | 0.0333 (8) | |
| C12 | 0.7784 (6) | 0.4298 (7) | 0.56576 (14) | 0.0330 (13) | |
| C13 | 0.8302 (7) | 0.3446 (7) | 0.59647 (14) | 0.0365 (13) | |
| H13 | 0.9372 | 0.2963 | 0.5969 | 0.044* | |
| C14 | 0.7305 (7) | 0.3297 (7) | 0.62568 (16) | 0.0385 (13) | |
| H14 | 0.7677 | 0.2721 | 0.6462 | 0.046* | |
| C15 | 0.5729 (7) | 0.4005 (7) | 0.62492 (15) | 0.0394 (13) | |
| H15 | 0.5037 | 0.393 | 0.6453 | 0.047* | |
| C16 | 0.5167 (7) | 0.4815 (7) | 0.59479 (14) | 0.0329 (11) | |
| O16 | 0.3648 (5) | 0.5520 (5) | 0.59131 (11) | 0.0414 (10) | |
| C161 | 0.2522 (8) | 0.5349 (8) | 0.62010 (18) | 0.0443 (15) | |
| H16A | 0.2355 | 0.4174 | 0.6253 | 0.066* | |
| H16B | 0.1462 | 0.5854 | 0.6137 | 0.066* | |
| H16C | 0.2971 | 0.5901 | 0.6412 | 0.066* | |
| C10 | 0.8942 (7) | 0.4456 (7) | 0.53655 (15) | 0.0364 (13) | |
| H10 | 0.9951 | 0.3863 | 0.5385 | 0.044* | |
| N10 | 0.8733 (5) | 0.5316 (6) | 0.50849 (12) | 0.0349 (11) | |
| C101 | 1.0070 (8) | 0.5533 (9) | 0.48146 (17) | 0.0502 (17) | |
| C111 | 0.9865 (8) | 0.7342 (9) | 0.46941 (19) | 0.0508 (17) | |
| H11A | 1.0338 | 0.8087 | 0.4876 | 0.061* | |
| H11B | 1.0475 | 0.7518 | 0.4469 | 0.061* | |
| O111 | 0.8214 (5) | 0.7719 (5) | 0.46438 (11) | 0.0444 (10) | |
| C112 | 1.1779 (9) | 0.5228 (11) | 0.4957 (2) | 0.072 (2) | |
| H11C | 1.1897 | 0.4044 | 0.5018 | 0.087* | |
| H11D | 1.26 | 0.5492 | 0.477 | 0.087* | |
| O112 | 1.2110 (7) | 0.6187 (10) | 0.52604 (19) | 0.096 (2) | |
| H112 | 1.2848 | 0.5727 | 0.5382 | 0.143* | |
| C113 | 0.9654 (11) | 0.4419 (9) | 0.44961 (19) | 0.065 (2) | |
| H11E | 0.8528 | 0.4678 | 0.441 | 0.078* | |
| H11F | 1.044 | 0.464 | 0.43 | 0.078* | |
| O113 | 0.9740 (11) | 0.2689 (7) | 0.45943 (17) | 0.105 (3) | |
| H113 | 0.9002 | 0.2478 | 0.4745 | 0.157* | |
| O1 | 0.787 (3) | 0.090 (3) | 0.4441 (6) | 0.048 (9) | 0.195 (15) |
| Mn1 | 0.0282 (4) | 0.0282 (4) | 0.0293 (6) | −0.0008 (5) | −0.0022 (4) | 0.0022 (4) |
| C11 | 0.031 (3) | 0.025 (3) | 0.036 (3) | −0.002 (2) | −0.005 (2) | 0.000 (2) |
| O11 | 0.026 (2) | 0.039 (2) | 0.034 (2) | −0.0011 (15) | −0.0036 (16) | 0.0023 (17) |
| C12 | 0.034 (3) | 0.030 (3) | 0.035 (3) | −0.005 (2) | −0.003 (2) | 0.002 (2) |
| C13 | 0.031 (3) | 0.037 (3) | 0.042 (3) | −0.001 (2) | −0.006 (2) | 0.003 (2) |
| C14 | 0.043 (3) | 0.035 (3) | 0.037 (3) | −0.005 (3) | −0.007 (2) | 0.008 (2) |
| C15 | 0.046 (3) | 0.035 (3) | 0.037 (3) | −0.008 (3) | 0.002 (3) | 0.001 (2) |
| C16 | 0.032 (3) | 0.029 (3) | 0.037 (3) | −0.005 (2) | 0.001 (2) | 0.003 (2) |
| O16 | 0.032 (2) | 0.052 (2) | 0.041 (2) | 0.0051 (17) | 0.0082 (17) | 0.0053 (19) |
| C161 | 0.038 (3) | 0.043 (4) | 0.052 (4) | 0.002 (3) | 0.011 (3) | 0.007 (3) |
| C10 | 0.026 (3) | 0.041 (3) | 0.042 (3) | 0.002 (2) | −0.002 (2) | 0.000 (3) |
| N10 | 0.028 (2) | 0.045 (3) | 0.032 (2) | −0.002 (2) | −0.0006 (18) | 0.007 (2) |
| C101 | 0.036 (3) | 0.067 (5) | 0.047 (4) | 0.008 (3) | 0.007 (3) | 0.012 (3) |
| C111 | 0.045 (4) | 0.060 (4) | 0.047 (4) | −0.008 (3) | 0.004 (3) | 0.016 (3) |
| O111 | 0.043 (2) | 0.048 (2) | 0.041 (2) | −0.010 (2) | −0.0092 (19) | 0.0110 (18) |
| C112 | 0.039 (4) | 0.098 (6) | 0.080 (6) | 0.006 (4) | 0.019 (4) | 0.035 (5) |
| O112 | 0.049 (3) | 0.142 (6) | 0.096 (5) | −0.025 (4) | −0.025 (3) | 0.055 (4) |
| C113 | 0.085 (6) | 0.056 (4) | 0.055 (4) | 0.015 (4) | 0.024 (4) | 0.012 (4) |
| O113 | 0.184 (8) | 0.053 (3) | 0.077 (4) | 0.048 (4) | 0.067 (5) | 0.025 (3) |
| O1 | 0.055 (16) | 0.037 (13) | 0.052 (15) | 0.017 (11) | 0.016 (11) | 0.008 (10) |
| Mn1—O111 | 1.871 (4) | C161—H16B | 0.98 |
| Mn1—O111i | 1.871 (4) | C161—H16C | 0.98 |
| Mn1—O11i | 1.939 (4) | C10—N10 | 1.275 (7) |
| Mn1—O11 | 1.939 (4) | C10—H10 | 0.95 |
| Mn1—N10 | 1.992 (5) | N10—C101 | 1.495 (7) |
| Mn1—N10i | 1.992 (5) | C101—C112 | 1.504 (10) |
| C11—O11 | 1.321 (6) | C101—C113 | 1.536 (10) |
| C11—C12 | 1.403 (8) | C101—C111 | 1.542 (10) |
| C11—C16 | 1.420 (8) | C111—O111 | 1.384 (8) |
| C12—C13 | 1.408 (7) | C111—H11A | 0.99 |
| C12—C10 | 1.449 (8) | C111—H11B | 0.99 |
| C13—C14 | 1.368 (8) | C112—O112 | 1.405 (11) |
| C13—H13 | 0.95 | C112—H11C | 0.99 |
| C14—C15 | 1.399 (9) | C112—H11D | 0.99 |
| C14—H14 | 0.95 | O112—H112 | 0.84 |
| C15—C16 | 1.384 (8) | C113—O113 | 1.450 (9) |
| C15—H15 | 0.95 | C113—H11E | 0.99 |
| C16—O16 | 1.362 (7) | C113—H11F | 0.99 |
| O16—C161 | 1.421 (7) | O113—H113 | 0.84 |
| C161—H16A | 0.98 | ||
| O111—Mn1—O111i | 94.0 (3) | H16A—C161—H16B | 109.5 |
| O111—Mn1—O11i | 89.58 (16) | O16—C161—H16C | 109.5 |
| O111i—Mn1—O11i | 172.89 (19) | H16A—C161—H16C | 109.5 |
| O111—Mn1—O11 | 172.89 (18) | H16B—C161—H16C | 109.5 |
| O111i—Mn1—O11 | 89.58 (16) | N10—C10—C12 | 126.0 (5) |
| O11i—Mn1—O11 | 87.6 (2) | N10—C10—H10 | 117 |
| O111—Mn1—N10 | 84.14 (18) | C12—C10—H10 | 117 |
| O111i—Mn1—N10 | 88.07 (19) | C10—N10—C101 | 122.0 (5) |
| O11i—Mn1—N10 | 98.44 (18) | C10—N10—Mn1 | 125.1 (4) |
| O11—Mn1—N10 | 89.82 (17) | C101—N10—Mn1 | 111.8 (4) |
| O111—Mn1—N10i | 88.07 (19) | N10—C101—C112 | 113.9 (5) |
| O111i—Mn1—N10i | 84.14 (18) | N10—C101—C113 | 107.5 (6) |
| O11i—Mn1—N10i | 89.82 (17) | C112—C101—C113 | 112.5 (7) |
| O11—Mn1—N10i | 98.44 (18) | N10—C101—C111 | 103.5 (5) |
| N10—Mn1—N10i | 168.6 (3) | C112—C101—C111 | 111.1 (6) |
| O11—C11—C12 | 123.7 (5) | C113—C101—C111 | 107.8 (5) |
| O11—C11—C16 | 118.3 (5) | O111—C111—C101 | 110.7 (5) |
| C12—C11—C16 | 118.0 (5) | O111—C111—H11A | 109.5 |
| C11—O11—Mn1 | 124.9 (3) | C101—C111—H11A | 109.5 |
| C11—C12—C13 | 119.8 (5) | O111—C111—H11B | 109.5 |
| C11—C12—C10 | 122.1 (5) | C101—C111—H11B | 109.5 |
| C13—C12—C10 | 118.1 (5) | H11A—C111—H11B | 108.1 |
| C14—C13—C12 | 121.6 (5) | C111—O111—Mn1 | 112.9 (4) |
| C14—C13—H13 | 119.2 | O112—C112—C101 | 111.9 (7) |
| C12—C13—H13 | 119.2 | O112—C112—H11C | 109.2 |
| C13—C14—C15 | 119.0 (5) | C101—C112—H11C | 109.2 |
| C13—C14—H14 | 120.5 | O112—C112—H11D | 109.2 |
| C15—C14—H14 | 120.5 | C101—C112—H11D | 109.2 |
| C16—C15—C14 | 120.7 (5) | H11C—C112—H11D | 107.9 |
| C16—C15—H15 | 119.7 | C112—O112—H112 | 109.5 |
| C14—C15—H15 | 119.7 | O113—C113—C101 | 111.0 (6) |
| O16—C16—C15 | 125.0 (5) | O113—C113—H11E | 109.4 |
| O16—C16—C11 | 114.3 (5) | C101—C113—H11E | 109.4 |
| C15—C16—C11 | 120.7 (5) | O113—C113—H11F | 109.4 |
| C16—O16—C161 | 117.7 (5) | C101—C113—H11F | 109.4 |
| O16—C161—H16A | 109.5 | H11E—C113—H11F | 108 |
| O16—C161—H16B | 109.5 | C113—O113—H113 | 109.5 |
| H··· | ||||
| O112—H112···O11ii | 0.84 | 2.2 | 2.850 (7) | 134 |
| O112—H112···O16ii | 0.84 | 2.1 | 2.802 (7) | 141 |
| O113—H113···O112iii | 0.84 | 2.3 | 2.965 (12) | 137 |