Literature DB >> 26594444

Crystal structure of ethyl 2-phenyl-9-phenyl-sulfonyl-9H-carbazole-3-carboxyl-ate.

M Umadevi1, P Raju2, R Yamuna3, A K Mohanakrishnan2, G Chakkaravarthi4.   

Abstract

In the title compound, C27H21NO4S, the dihedral angles between the carbazole ring system (r.m.s. deviation = 0.015 Å) and the sulfur-bonded and directly linked benzene rings are 79.98 (11) and 53.51 (18)°, respectively. The benzene rings subtend a dihedral angle of 48.4 (2)°. The ethyl side chain of the ester group has an extended conformation [C-O-C-C = -172.3 (3)°]. In the crystal, inversion dimers linked by pairs of weak C-H⋯O hydrogen bonds generate R 2 (2)(22) loops. The dimers are linked by weak C-H⋯π and π-π [centroid-to-centroid distances ranging from 3.5042 (14) to 3.888 (2) Å] inter-actions, thereby forming a three-dimensional supra-molecular network.

Entities:  

Keywords:  9H-carbazole-3-carboxyl­ate; C—H⋯π inter­actions; biological activity; crystal structure; ester; hydrogen bonding; indole derivatives; phenyl­sulfon­yl; π–π inter­actions

Year:  2015        PMID: 26594444      PMCID: PMC4647343          DOI: 10.1107/S205698901501662X

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For the biological activity of indole derivatives, see: Itoigawa et al. (2000 ▸); Ramsewak et al. (1999 ▸). For related structures, see: Chakkaravarthi et al. (2008 ▸, 2009 ▸).

Experimental

Crystal data

C27H21NO4S M = 455.51 Monoclinic, a = 13.7655 (8) Å b = 7.8207 (4) Å c = 20.9500 (12) Å β = 94.054 (2)° V = 2249.7 (2) Å3 Z = 4 Mo Kα radiation μ = 0.18 mm−1 T = 295 K 0.28 × 0.26 × 0.24 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▸) T min = 0.952, T max = 0.958 39017 measured reflections 4997 independent reflections 2939 reflections with I > 2σ(I) R int = 0.048

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.146 S = 1.04 4997 reflections 299 parameters 4 restraints H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.34 e Å−3

Data collection: APEX2 (Bruker, 2004 ▸); cell refinement: SAINT (Bruker, 2004 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▸); molecular graphics: PLATON (Spek, 2009 ▸); software used to prepare material for publication: SHELXL97 and PLATON. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S205698901501662X/hb7499sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S205698901501662X/hb7499Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S205698901501662X/hb7499Isup3.cml Click here for additional data file. . DOI: 10.1107/S205698901501662X/hb7499fig1.tif The mol­ecular structure of (I), with 30% probability displacement ellipsoids for non-H atoms. Click here for additional data file. b . DOI: 10.1107/S205698901501662X/hb7499fig2.tif The crystal packing of the title compound viewed along the b axis. The hydrogen bonds are shown as dashed lines (see Table 1), and C-bound H atoms have been omitted for clarity. CCDC reference: 1422541 Additional supporting information: crystallographic information; 3D view; checkCIF report
C27H21NO4SF(000) = 952
Mr = 455.51Dx = 1.345 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 9043 reflections
a = 13.7655 (8) Åθ = 2.8–24.7°
b = 7.8207 (4) ŵ = 0.18 mm1
c = 20.9500 (12) ÅT = 295 K
β = 94.054 (2)°Block, colourless
V = 2249.7 (2) Å30.28 × 0.26 × 0.24 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer4997 independent reflections
Radiation source: fine-focus sealed tube2939 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.048
ω and φ scanθmax = 27.3°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −17→17
Tmin = 0.952, Tmax = 0.958k = −9→9
39017 measured reflectionsl = −26→26
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.146H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0543P)2 + 1.1538P] where P = (Fo2 + 2Fc2)/3
4997 reflections(Δ/σ)max < 0.001
299 parametersΔρmax = 0.19 e Å3
4 restraintsΔρmin = −0.34 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.66860 (19)0.3090 (3)0.66383 (11)0.0483 (6)
C20.6003 (2)0.4052 (4)0.69291 (13)0.0620 (7)
H20.53990.35940.70070.074*
C30.6240 (3)0.5717 (4)0.71020 (15)0.0806 (10)
H30.57910.63920.72980.097*
C40.7125 (3)0.6369 (4)0.69873 (15)0.0834 (11)
H40.72730.74920.71030.100*
C50.7798 (3)0.5405 (5)0.67054 (16)0.0807 (10)
H50.84030.58690.66340.097*
C60.7586 (2)0.3740 (4)0.65255 (13)0.0625 (7)
H60.80410.30740.63320.075*
C70.48068 (17)0.1830 (3)0.55839 (12)0.0469 (6)
C80.4049 (2)0.1610 (3)0.59744 (14)0.0597 (7)
H80.41380.10590.63670.072*
C90.3155 (2)0.2248 (4)0.57535 (17)0.0699 (9)
H90.26320.21330.60070.084*
C100.3011 (2)0.3051 (4)0.51685 (17)0.0708 (9)
H100.23950.34620.50360.085*
C110.37638 (19)0.3250 (4)0.47802 (15)0.0600 (7)
H110.36670.37870.43850.072*
C120.46766 (17)0.2630 (3)0.49929 (12)0.0470 (6)
C130.55983 (17)0.2628 (3)0.47067 (11)0.0426 (6)
C140.58915 (19)0.3254 (3)0.41368 (12)0.0497 (6)
H140.54400.37650.38460.060*
C150.68539 (19)0.3126 (3)0.39965 (11)0.0475 (6)
C160.75333 (18)0.2285 (3)0.44225 (12)0.0466 (6)
C170.72340 (17)0.1631 (3)0.49910 (11)0.0444 (6)
H170.76730.10610.52740.053*
C180.62778 (17)0.1835 (3)0.51332 (11)0.0416 (5)
C190.7118 (2)0.4012 (3)0.34099 (14)0.0607 (7)
C200.8370 (3)0.5489 (6)0.2923 (2)0.1093 (14)
H20A0.80040.65260.28220.131*
H20B0.83020.47330.25560.131*
C210.9384 (4)0.5893 (7)0.3073 (3)0.157 (2)
H21A0.94430.66530.34340.236*
H21B0.96440.64340.27110.236*
H21C0.97390.48600.31750.236*
C220.8555 (2)0.1969 (4)0.42791 (15)0.0608 (7)
C230.9301 (2)0.2432 (6)0.4718 (2)0.0980 (12)
H230.91620.29780.50960.118*
C241.0256 (3)0.2082 (8)0.4597 (3)0.158 (2)
H241.07560.23800.48980.190*
C251.0471 (4)0.1317 (8)0.4049 (4)0.173 (3)
H251.11170.11260.39660.208*
C260.9744 (4)0.0826 (6)0.3620 (3)0.147 (2)
H260.98950.02630.32480.176*
C270.8780 (3)0.1146 (4)0.37239 (18)0.0861 (11)
H270.82870.08110.34240.103*
N10.58011 (14)0.1277 (2)0.56748 (9)0.0444 (5)
O10.57068 (14)0.0310 (2)0.67859 (9)0.0702 (6)
O20.72574 (14)0.0126 (2)0.62797 (9)0.0634 (5)
O30.65793 (19)0.4200 (3)0.29378 (10)0.0948 (8)
O40.80077 (15)0.4669 (3)0.34730 (10)0.0734 (6)
S10.63858 (5)0.10114 (8)0.63854 (3)0.0509 (2)
U11U22U33U12U13U23
C10.0547 (16)0.0481 (14)0.0409 (13)0.0008 (12)−0.0055 (11)0.0048 (11)
C20.0679 (19)0.0637 (17)0.0538 (16)0.0102 (15)0.0008 (14)−0.0075 (14)
C30.109 (3)0.068 (2)0.0622 (19)0.019 (2)−0.0103 (19)−0.0144 (16)
C40.132 (3)0.0536 (18)0.0597 (19)−0.006 (2)−0.030 (2)0.0012 (15)
C50.089 (3)0.078 (2)0.072 (2)−0.029 (2)−0.0194 (18)0.0139 (18)
C60.0603 (19)0.0667 (18)0.0591 (17)−0.0064 (14)−0.0056 (14)0.0076 (14)
C70.0411 (15)0.0379 (12)0.0624 (16)−0.0072 (11)0.0091 (12)−0.0121 (11)
C80.0522 (18)0.0551 (15)0.0735 (18)−0.0113 (13)0.0173 (14)−0.0106 (14)
C90.0479 (19)0.0633 (18)0.101 (3)−0.0128 (14)0.0230 (17)−0.0223 (18)
C100.0380 (17)0.0687 (19)0.105 (3)−0.0051 (14)−0.0003 (17)−0.0231 (18)
C110.0417 (16)0.0593 (16)0.0779 (19)−0.0003 (13)−0.0036 (14)−0.0114 (14)
C120.0425 (15)0.0393 (12)0.0587 (15)−0.0049 (11)0.0016 (12)−0.0124 (11)
C130.0383 (14)0.0390 (12)0.0503 (14)−0.0034 (10)0.0006 (11)−0.0076 (11)
C140.0518 (16)0.0478 (13)0.0485 (14)0.0027 (12)−0.0038 (12)−0.0051 (11)
C150.0537 (16)0.0427 (13)0.0464 (14)0.0003 (12)0.0064 (12)−0.0030 (11)
C160.0444 (15)0.0412 (12)0.0550 (15)−0.0004 (11)0.0078 (12)−0.0024 (11)
C170.0397 (14)0.0450 (13)0.0484 (14)0.0038 (11)0.0029 (11)0.0005 (11)
C180.0438 (15)0.0358 (11)0.0454 (13)−0.0048 (10)0.0055 (11)−0.0058 (10)
C190.074 (2)0.0547 (16)0.0545 (17)0.0057 (15)0.0150 (15)0.0020 (13)
C200.124 (4)0.106 (3)0.105 (3)−0.003 (3)0.052 (3)0.041 (2)
C210.121 (4)0.149 (4)0.212 (6)−0.001 (3)0.091 (4)0.068 (4)
C220.0500 (17)0.0580 (16)0.0767 (19)0.0079 (13)0.0211 (15)0.0163 (14)
C230.046 (2)0.137 (3)0.111 (3)−0.007 (2)0.006 (2)0.036 (3)
C240.046 (3)0.217 (6)0.214 (5)0.001 (3)0.016 (3)0.115 (4)
C250.089 (3)0.160 (5)0.284 (7)0.056 (3)0.106 (3)0.131 (4)
C260.158 (4)0.086 (3)0.215 (5)0.055 (3)0.137 (4)0.052 (3)
C270.094 (3)0.0635 (19)0.108 (3)0.0209 (17)0.056 (2)0.0117 (18)
N10.0435 (12)0.0426 (10)0.0477 (11)−0.0024 (9)0.0078 (9)−0.0016 (9)
O10.0807 (14)0.0662 (12)0.0660 (12)−0.0102 (10)0.0219 (11)0.0172 (10)
O20.0687 (11)0.0556 (11)0.0662 (12)0.0211 (9)0.0060 (9)0.0091 (9)
O30.113 (2)0.115 (2)0.0549 (13)−0.0079 (15)−0.0046 (13)0.0193 (13)
O40.0736 (15)0.0710 (13)0.0786 (14)0.0018 (11)0.0273 (11)0.0238 (11)
S10.0585 (4)0.0428 (3)0.0519 (4)0.0026 (3)0.0086 (3)0.0075 (3)
C1—C61.375 (4)C15—C191.478 (4)
C1—C21.379 (4)C16—C171.385 (3)
C1—S11.750 (3)C16—C221.480 (3)
C2—C31.384 (4)C17—C181.379 (3)
C2—H20.9300C17—H170.9300
C3—C41.357 (5)C18—N11.419 (3)
C3—H30.9300C19—O31.202 (3)
C4—C51.361 (5)C19—O41.326 (3)
C4—H40.9300C20—O41.438 (4)
C5—C61.381 (4)C20—C211.443 (6)
C5—H50.9300C20—H20A0.9700
C6—H60.9300C20—H20B0.9700
C7—C81.381 (3)C21—H21A0.9600
C7—C121.388 (4)C21—H21B0.9600
C7—N11.435 (3)C21—H21C0.9600
C8—C91.377 (4)C22—C231.377 (5)
C8—H80.9300C22—C271.383 (4)
C9—C101.379 (4)C23—C241.385 (5)
C9—H90.9300C23—H230.9300
C10—C111.371 (4)C24—C251.345 (9)
C10—H100.9300C24—H240.9300
C11—C121.391 (4)C25—C261.354 (9)
C11—H110.9300C25—H250.9300
C12—C131.441 (3)C26—C271.383 (5)
C13—C141.377 (3)C26—H260.9300
C13—C181.393 (3)C27—H270.9300
C14—C151.381 (3)N1—S11.655 (2)
C14—H140.9300O1—S11.4103 (18)
C15—C161.409 (3)O2—S11.4163 (18)
C6—C1—C2121.6 (3)C18—C17—H17120.4
C6—C1—S1119.2 (2)C16—C17—H17120.4
C2—C1—S1119.1 (2)C17—C18—C13121.4 (2)
C1—C2—C3118.3 (3)C17—C18—N1129.7 (2)
C1—C2—H2120.9C13—C18—N1108.8 (2)
C3—C2—H2120.9O3—C19—O4123.1 (3)
C4—C3—C2120.3 (3)O3—C19—C15124.6 (3)
C4—C3—H3119.8O4—C19—C15112.2 (3)
C2—C3—H3119.8O4—C20—C21107.9 (4)
C3—C4—C5121.1 (3)O4—C20—H20A110.1
C3—C4—H4119.5C21—C20—H20A110.1
C5—C4—H4119.5O4—C20—H20B110.1
C4—C5—C6120.2 (3)C21—C20—H20B110.1
C4—C5—H5119.9H20A—C20—H20B108.4
C6—C5—H5119.9C20—C21—H21A109.5
C1—C6—C5118.6 (3)C20—C21—H21B109.5
C1—C6—H6120.7H21A—C21—H21B109.5
C5—C6—H6120.7C20—C21—H21C109.5
C8—C7—C12122.0 (2)H21A—C21—H21C109.5
C8—C7—N1129.6 (3)H21B—C21—H21C109.5
C12—C7—N1108.4 (2)C23—C22—C27119.0 (3)
C9—C8—C7116.7 (3)C23—C22—C16119.6 (3)
C9—C8—H8121.6C27—C22—C16121.4 (3)
C7—C8—H8121.6C22—C23—C24119.9 (5)
C8—C9—C10122.2 (3)C22—C23—H23120.1
C8—C9—H9118.9C24—C23—H23120.1
C10—C9—H9118.9C25—C24—C23120.9 (6)
C11—C10—C9120.7 (3)C25—C24—H24119.5
C11—C10—H10119.6C23—C24—H24119.5
C9—C10—H10119.6C24—C25—C26119.7 (5)
C10—C11—C12118.3 (3)C24—C25—H25120.1
C10—C11—H11120.8C26—C25—H25120.1
C12—C11—H11120.8C25—C26—C27121.1 (6)
C7—C12—C11120.0 (2)C25—C26—H26119.4
C7—C12—C13108.0 (2)C27—C26—H26119.4
C11—C12—C13132.0 (3)C22—C27—C26119.4 (4)
C14—C13—C18119.3 (2)C22—C27—H27120.3
C14—C13—C12132.9 (2)C26—C27—H27120.3
C18—C13—C12107.7 (2)C18—N1—C7106.97 (19)
C13—C14—C15120.2 (2)C18—N1—S1122.35 (16)
C13—C14—H14119.9C7—N1—S1123.77 (16)
C15—C14—H14119.9C19—O4—C20117.6 (3)
C14—C15—C16120.2 (2)O1—S1—O2120.49 (12)
C14—C15—C19116.0 (2)O1—S1—N1106.47 (11)
C16—C15—C19123.7 (2)O2—S1—N1106.51 (10)
C17—C16—C15119.5 (2)O1—S1—C1109.47 (12)
C17—C16—C22117.2 (2)O2—S1—C1108.49 (12)
C15—C16—C22123.2 (2)N1—S1—C1104.18 (10)
C18—C17—C16119.3 (2)
C6—C1—C2—C30.7 (4)C14—C15—C19—O3−31.9 (4)
S1—C1—C2—C3−177.4 (2)C16—C15—C19—O3152.3 (3)
C1—C2—C3—C4−0.2 (4)C14—C15—C19—O4144.6 (2)
C2—C3—C4—C5−0.4 (5)C16—C15—C19—O4−31.2 (3)
C3—C4—C5—C60.6 (5)C17—C16—C22—C23−54.3 (4)
C2—C1—C6—C5−0.6 (4)C15—C16—C22—C23129.2 (3)
S1—C1—C6—C5177.5 (2)C17—C16—C22—C27122.7 (3)
C4—C5—C6—C1−0.1 (4)C15—C16—C22—C27−53.8 (4)
C12—C7—C8—C9−1.0 (4)C27—C22—C23—C240.5 (5)
N1—C7—C8—C9−178.3 (2)C16—C22—C23—C24177.6 (3)
C7—C8—C9—C100.8 (4)C22—C23—C24—C251.0 (7)
C8—C9—C10—C11−0.2 (4)C23—C24—C25—C26−2.3 (9)
C9—C10—C11—C12−0.3 (4)C24—C25—C26—C272.1 (9)
C8—C7—C12—C110.5 (4)C23—C22—C27—C26−0.8 (5)
N1—C7—C12—C11178.4 (2)C16—C22—C27—C26−177.8 (3)
C8—C7—C12—C13−179.2 (2)C25—C26—C27—C22−0.5 (7)
N1—C7—C12—C13−1.3 (2)C17—C18—N1—C7179.8 (2)
C10—C11—C12—C70.1 (4)C13—C18—N1—C7−2.9 (2)
C10—C11—C12—C13179.7 (2)C17—C18—N1—S128.0 (3)
C7—C12—C13—C14−179.2 (2)C13—C18—N1—S1−154.65 (16)
C11—C12—C13—C141.2 (4)C8—C7—N1—C18−179.8 (2)
C7—C12—C13—C18−0.5 (3)C12—C7—N1—C182.6 (2)
C11—C12—C13—C18179.9 (2)C8—C7—N1—S1−28.5 (3)
C18—C13—C14—C15−1.3 (3)C12—C7—N1—S1153.85 (16)
C12—C13—C14—C15177.3 (2)O3—C19—O4—C20−6.6 (4)
C13—C14—C15—C162.9 (3)C15—C19—O4—C20176.9 (3)
C13—C14—C15—C19−173.1 (2)C21—C20—O4—C19−172.3 (3)
C14—C15—C16—C17−1.8 (3)C18—N1—S1—O1−174.87 (17)
C19—C15—C16—C17173.8 (2)C7—N1—S1—O138.1 (2)
C14—C15—C16—C22174.6 (2)C18—N1—S1—O2−45.1 (2)
C19—C15—C16—C22−9.7 (4)C7—N1—S1—O2167.82 (18)
C15—C16—C17—C18−0.8 (3)C18—N1—S1—C169.47 (19)
C22—C16—C17—C18−177.5 (2)C7—N1—S1—C1−77.6 (2)
C16—C17—C18—C132.4 (3)C6—C1—S1—O1152.0 (2)
C16—C17—C18—N1179.5 (2)C2—C1—S1—O1−29.9 (2)
C14—C13—C18—C17−1.4 (3)C6—C1—S1—O218.7 (2)
C12—C13—C18—C17179.7 (2)C2—C1—S1—O2−163.2 (2)
C14—C13—C18—N1−179.00 (19)C6—C1—S1—N1−94.5 (2)
C12—C13—C18—N12.1 (2)C2—C1—S1—N183.7 (2)
D—H···AD—HH···AD···AD—H···A
C25—H25···O2i0.932.533.439 (5)166
C11—H11···Cg2ii0.932.833.752 (3)172
Table 1

Hydrogen-bond geometry (, )

Cg2 is the centroid of the C1C6 ring.

DHA DHHA D A DHA
C25H25O2i 0.932.533.439(5)166
C11H11Cg2ii 0.932.833.752(3)172

Symmetry codes: (i) ; (ii) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Biologically active carbazole alkaloids from Murraya koenigii.

Authors:  R S Ramsewak; M G Nair; G M Strasburg; D L DeWitt; J L Nitiss
Journal:  J Agric Food Chem       Date:  1999-02       Impact factor: 5.279

3.  Antitumor agents. 203. Carbazole alkaloid murrayaquinone A and related synthetic carbazolequinones as cytotoxic agents.

Authors:  M Itoigawa; Y Kashiwada; C Ito; H Furukawa; Y Tachibana; K F Bastow; K H Lee
Journal:  J Nat Prod       Date:  2000-07       Impact factor: 4.050

4.  7,9-Dimethyl-5-phenyl-sulfonyl-5H-benzo[b]carbazole.

Authors:  G Chakkaravarthi; V Dhayalan; A K Mohanakrishnan; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-08-06

5.  6-Meth-oxy-9-phenyl-sulfonyl-2-(2-thien-yl)-9H-thieno[2,3-b]carbazole.

Authors:  G Chakkaravarthi; A Marx; V Dhayalan; A K Mohanakrishnan; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-02-06

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  6 in total

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