Literature DB >> 26590275

The Exiguobacterium sibiricum 255-15 GtfC Enzyme Represents a Novel Glycoside Hydrolase 70 Subfamily of 4,6-α-Glucanotransferase Enzymes.

Joana Gangoiti1, Tjaard Pijning2, Lubbert Dijkhuizen3.   

Abstract

The glycoside hydrolase 70 (GH70) family originally was established for glucansucrase enzymes found solely in lactic acid bacteria synthesizing α-glucan polysaccharides from sucrose (e.g., GtfA). In recent years, we have characterized GtfB and related Lactobacillus enzymes as 4,6-α-glucanotransferase enzymes. These GtfB-type enzymes constitute the first GH70 subfamily of enzymes that are unable to act on sucrose as a substrate but are active with maltodextrins and starch, cleave α1→4 linkages, and synthesize linear α1→6-glucan chains. The GtfB disproportionating type of activity results in the conversion of malto-oligosaccharides into isomalto/malto-polysaccharides with a relatively high percentage of α1→6 linkages. This paper reports the identification of the members of a second GH70 subfamily (designated GtfC enzymes) and the characterization of the Exiguobacterium sibiricum 255-15 GtfC enzyme, which is also inactive with sucrose and displays 4,6-α-glucanotransferase activity with malto-oligosaccharides. GtfC differs from GtfB in synthesizing isomalto/malto-oligosaccharides. Biochemically, the GtfB- and GtfC-type enzymes are related, but phylogenetically, they clearly constitute different GH70 subfamilies, displaying only 30% sequence identity. Whereas the GtfB-type enzyme largely has the same domain order as glucansucrases (with α-amylase domains A, B, and C plus domains IV and V), this GtfC-type enzyme differs in the order of these domains and completely lacks domain V. In GtfC, the sequence of conserved regions I to IV of clan GH-H is identical to that in GH13 (I-II-III-IV) but different from that in GH70 (II-III-IV-I because of a circular permutation of the (β/α)8 barrel. The GtfC 4,6-α-glucanotransferase enzymes thus represent structurally and functionally very interesting evolutionary intermediates between α-amylase and glucansucrase enzymes.
Copyright © 2016, American Society for Microbiology. All Rights Reserved.

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Year:  2015        PMID: 26590275      PMCID: PMC4711130          DOI: 10.1128/AEM.03420-15

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  32 in total

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Authors:  Štefan Janeček; Birte Svensson; E Ann MacGregor
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3.  4,6-α-glucanotransferase, a novel enzyme that structurally and functionally provides an evolutionary link between glycoside hydrolase enzyme families 13 and 70.

Authors:  Slavko Kralj; Pieter Grijpstra; Sander S van Leeuwen; Hans Leemhuis; Justyna M Dobruchowska; Rachel M van der Kaaij; Amarila Malik; Ariyanti Oetari; Johannis P Kamerling; Lubbert Dijkhuizen
Journal:  Appl Environ Microbiol       Date:  2011-09-23       Impact factor: 4.792

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Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

5.  Structural characterization of linear isomalto-/malto-oligomer products synthesized by the novel GTFB 4,6-α-glucanotransferase enzyme from Lactobacillus reuteri 121.

Authors:  Justyna M Dobruchowska; Gerrit J Gerwig; Slavko Kralj; Pieter Grijpstra; Hans Leemhuis; Lubbert Dijkhuizen; Johannis P Kamerling
Journal:  Glycobiology       Date:  2011-12-02       Impact factor: 4.313

6.  Structural characterization of bioengineered alpha-D-glucans produced by mutant glucansucrase GTF180 enzymes of Lactobacillus reuteri strain 180.

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Review 8.  Glucansucrases: three-dimensional structures, reactions, mechanism, α-glucan analysis and their implications in biotechnology and food applications.

Authors:  Hans Leemhuis; Tjaard Pijning; Justyna M Dobruchowska; Sander S van Leeuwen; Slavko Kralj; Bauke W Dijkstra; Lubbert Dijkhuizen
Journal:  J Biotechnol       Date:  2012-07-10       Impact factor: 3.307

9.  Structure of the α-1,6/α-1,4-specific glucansucrase GTFA from Lactobacillus reuteri 121.

Authors:  Tjaard Pijning; Andreja Vujičić-Žagar; Slavko Kralj; Lubbert Dijkhuizen; Bauke W Dijkstra
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-11-14

10.  4,6-α-Glucanotransferase activity occurs more widespread in Lactobacillus strains and constitutes a separate GH70 subfamily.

Authors:  Hans Leemhuis; Willem P Dijkman; Justyna M Dobruchowska; Tjaard Pijning; Pieter Grijpstra; Slavko Kralj; Johannis P Kamerling; Lubbert Dijkhuizen
Journal:  Appl Microbiol Biotechnol       Date:  2012-02-25       Impact factor: 4.813

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  8 in total

Review 1.  Remarkable evolutionary relatedness among the enzymes and proteins from the α-amylase family.

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Journal:  Cell Mol Life Sci       Date:  2016-05-06       Impact factor: 9.261

2.  Molecular and Functional Study of a Branching Sucrase-Like Glucansucrase Reveals an Evolutionary Intermediate between Two Subfamilies of the GH70 Enzymes.

Authors:  Minghui Yan; Bing-Hua Wang; Xiaofen Xu; Peng Chang; Feng Hang; Zhengjun Wu; Chunping You; Zhenmin Liu
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3.  Structural determinants of alternating (α1 → 4) and (α1 → 6) linkage specificity in reuteransucrase of Lactobacillus reuteri.

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Review 4.  Structure-function relationships of family GH70 glucansucrase and 4,6-α-glucanotransferase enzymes, and their evolutionary relationships with family GH13 enzymes.

Authors:  Xiangfeng Meng; Joana Gangoiti; Yuxiang Bai; Tjaard Pijning; Sander S Van Leeuwen; Lubbert Dijkhuizen
Journal:  Cell Mol Life Sci       Date:  2016-05-07       Impact factor: 9.261

5.  4,3-α-Glucanotransferase, a novel reaction specificity in glycoside hydrolase family 70 and clan GH-H.

Authors:  Joana Gangoiti; Sander S van Leeuwen; Gerrit J Gerwig; Stéphane Duboux; Christina Vafiadi; Tjaard Pijning; Lubbert Dijkhuizen
Journal:  Sci Rep       Date:  2017-01-06       Impact factor: 4.379

6.  Characterization of the Paenibacillus beijingensis DSM 24997 GtfD and its glucan polymer products representing a new glycoside hydrolase 70 subfamily of 4,6-α-glucanotransferase enzymes.

Authors:  Joana Gangoiti; Lisa Lamothe; Sander Sebastiaan van Leeuwen; Christina Vafiadi; Lubbert Dijkhuizen
Journal:  PLoS One       Date:  2017-04-11       Impact factor: 3.240

7.  Mining novel starch-converting Glycoside Hydrolase 70 enzymes from the Nestlé Culture Collection genome database: The Lactobacillus reuteri NCC 2613 GtfB.

Authors:  Joana Gangoiti; Sander S van Leeuwen; Xiangfeng Meng; Stéphane Duboux; Christina Vafiadi; Tjaard Pijning; Lubbert Dijkhuizen
Journal:  Sci Rep       Date:  2017-08-30       Impact factor: 4.379

8.  Xerotolerance: A New Property in Exiguobacterium Genus.

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Journal:  Microorganisms       Date:  2021-11-28
  8 in total

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