Literature DB >> 26588933

Oxidation of 5'-dGMP, 5'-dGDP, and 5'-dGTP by a platinum(IV) complex.

Ioannis Kipouros1, Sebastian Matias Fica-Contreras1, Gregory Joon Kee Bowe1, Sunhee Choi2.   

Abstract

We previously reported that a Pt(IV) complex, [Pt(IV)(dach)Cl4] [trans-d,l-1,2-diaminocyclohexanetetrachloroplatinum(IV)] binds to the N7 of 5'-dGMP (deoxyguanosine-5'-monophosphate) at a relatively fast rate and oxidizes it to 8-oxo-5'-dGMP. Here, we further studied the kinetics of the oxidation of 5'-dGMP by the Pt(IV) complex. The electron transfer rate constants between 5'-dGMP and Pt(IV) in [H8-5'-dGMP-Pt(IV)] and [D8-5'-dGMP-Pt(IV)] were similar, giving a small value of the kinetic isotope effect (KIE: 1.2 ± 0.2). This small KIE indicates that the deprotonation of H8 in [H8-5'-dGMP-Pt(IV)] is not involved in the rate-determining step in the electron transfer between guanine (G) and Pt(IV). We also studied the reaction of 5'-dGDP (deoxyguanosine-5'-diphosphate) and 5'-dGTP (deoxyguanosine-5'-triphosphate) with the Pt(IV) complex. Our results showed that [Pt(IV)(dach)Cl4] oxidized 5'-dGDP and 5'-dGTP to 8-oxo-5'-dGDP and 8-oxo-5'-dGTP, respectively, by the same mechanism and kinetics as for 5'-dGMP. The Pt(IV) complex binds to N7 followed by a two-electron inner sphere electron transfer from G to Pt(IV). The reaction was catalyzed by Pt(II) and occurred faster at higher pH. The electron transfer was initiated by either an intramolecular nucleophilic attack by any of the phosphate groups or an intermolecular nucleophilic attack by free OH(-) in the solution. The rates of reactions for the three nucleotides followed the order: 5'-dGMP > 5'-dGDP > 5'-dGTP, indicating that the bulkier the phosphate groups are, the slower the reaction is, due to the larger steric hindrance and rotational barrier of the phosphate groups.

Entities:  

Keywords:  5′-dGDP; 5′-dGMP; 5′-dGTP; Oxidation; Platinum(IV) complex

Mesh:

Substances:

Year:  2015        PMID: 26588933     DOI: 10.1007/s00775-015-1312-0

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  18 in total

1.  Oxidative Nucleobase Modifications Leading to Strand Scission.

Authors:  Cynthia J. Burrows; James G. Muller
Journal:  Chem Rev       Date:  1998-05-07       Impact factor: 60.622

Review 2.  Mitochondria, oxidants, and aging.

Authors:  Robert S Balaban; Shino Nemoto; Toren Finkel
Journal:  Cell       Date:  2005-02-25       Impact factor: 41.582

3.  1H and (31)P NMR and EPR of Pentaammineruthenium(III) Complexes of Endocyclically Coordinated Nucleotides, Nucleosides, and Related Heterocyclic Bases. Autoxidation of [(Guokappa(N7))(NH(3))(5)Ru(III)] (Guo = Guanosine). Crystal Structure of [7MeGuakappa(N9)(NH(3))(5)Ru]Cl(3).3H(2)O.

Authors:  V. M. Rodriguez-Bailey; K. J. LaChance-Galang; P. E. Doan; M. J. Clarke
Journal:  Inorg Chem       Date:  1997-04-23       Impact factor: 5.165

4.  Program DYNAFIT for the analysis of enzyme kinetic data: application to HIV proteinase.

Authors:  P Kuzmic
Journal:  Anal Biochem       Date:  1996-06-01       Impact factor: 3.365

5.  Density functional theory studies on the oxidation of 5'-dGMP and 5'-dAMP by a platinum(IV) complex.

Authors:  Alireza Ariafard; Elham S Tabatabaie; Simin Aghmasheh; Sahar Najaflo; Brian F Yates
Journal:  Inorg Chem       Date:  2012-07-18       Impact factor: 5.165

6.  Disproportionation of pentaammineruthenium(III)-nucleoside complexes leads to two-electron oxidation of nucleosides without involving oxygen molecules.

Authors:  Matthew W Wolf; Sunhee Choi
Journal:  J Biol Inorg Chem       Date:  2012-10-07       Impact factor: 3.358

7.  Mechanisms of DNA damage by chromium(V) carcinogens.

Authors:  R N Bose; B S Fonkeng; S Moghaddas; D Stroup
Journal:  Nucleic Acids Res       Date:  1998-04-01       Impact factor: 16.971

Review 8.  Reactive oxygen and nitrogen species in Alzheimer's disease.

Authors:  Mutay Aslan; Tomris Ozben
Journal:  Curr Alzheimer Res       Date:  2004-05       Impact factor: 3.498

Review 9.  Oxidative stress and oxidative damage in carcinogenesis.

Authors:  James E Klaunig; Lisa M Kamendulis; Barbara A Hocevar
Journal:  Toxicol Pathol       Date:  2009-12-17       Impact factor: 1.902

Review 10.  The defense mechanisms in mammalian cells against oxidative damage in nucleic acids and their involvement in the suppression of mutagenesis and cell death.

Authors:  Yusaku Nakabeppu; Daisuke Tsuchimoto; Masato Furuichi; Kunihiko Sakumi
Journal:  Free Radic Res       Date:  2004-05
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.