| Literature DB >> 26587838 |
Chuen-Yu Cheng1, Wei-Lin Tu1, Shih-Han Wang1, Pin-Chi Tang1,2,3, Chih-Feng Chen1,2,3, Hsin-Hsin Chen4, Yen-Pai Lee1, Shuen-Ei Chen1,2,3, San-Yuan Huang1,2,3,5.
Abstract
This study investigated global gene expression in the small yellow follicles (6-8 mm diameter) of broiler-type B strain Taiwan country chickens (TCCs) in response to acute heat stress. Twelve 30-wk-old TCC hens were divided into four groups: control hens maintained at 25°C and hens subjected to 38°C acute heat stress for 2 h without recovery (H2R0), with 2-h recovery (H2R2), and with 6-h recovery (H2R6). Small yellow follicles were collected for RNA isolation and microarray analysis at the end of each time point. Results showed that 69, 51, and 76 genes were upregulated and 58, 15, 56 genes were downregulated after heat treatment of H2R0, H2R2, and H2R6, respectively, using a cutoff value of two-fold or higher. Gene ontology analysis revealed that these differentially expressed genes are associated with the biological processes of cell communication, developmental process, protein metabolic process, immune system process, and response to stimuli. Upregulation of heat shock protein 25, interleukin 6, metallopeptidase 1, and metalloproteinase 13, and downregulation of type II alpha 1 collagen, discoidin domain receptor tyrosine kinase 2, and Kruppel-like factor 2 suggested that acute heat stress induces proteolytic disintegration of the structural matrix and inflamed damage and adaptive responses of gene expression in the follicle cells. These suggestions were validated through gene expression, using quantitative real-time polymerase chain reaction. Functional annotation clarified that interleukin 6-related pathways play a critical role in regulating acute heat stress responses in the small yellow follicles of TCC hens.Entities:
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Year: 2015 PMID: 26587838 PMCID: PMC4654548 DOI: 10.1371/journal.pone.0143418
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Primers and product size of genes used for validation using quantitative real-time polymerase chain reaction.
| Gene symbol | GenBank accession number | Forward (F) primers 5'-3' | Product size (base pairs) |
|---|---|---|---|
| Reverse (R) primers 5'-3' | |||
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| NM_001010842 | F: CCGTCTTCTGCTGAGAGGAGTG | 117 |
| R: ACCGTTGTTCCGTCCCATCAC | |||
|
| NM_204628 | F: AGCAAAACACCTGTTACATTTCT | 96 |
| R: AGTCTGGCTGCTGGACATTT | |||
|
| NM_001031276 | F: CAGCCTAACTGACAAACAGATGAAG | 100 |
| R: GCATTCCTCATTCTCACATGAACAC | |||
|
| AF070478 | F: TTGGTGCTAAGTATAGATGAATGCC | 131 |
| R: TGTAGGTAGTCAGTGCTTGTTCG | |||
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| NM_001001471 | F: CCCTGCCTGCTAGGACAAG | 149 |
| R: AGGTCTGGGCTCTGGAAGG | |||
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| NM_204426 | F: CACTGAACGGATGGCACGAC | 137 |
| R: CCTCCACCCGCCCTACG | |||
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| CR387623 | F: TGCGGACGGGAGGAACTG | 103 |
| R: AGCAATAGGGTACTGCGAATGG | |||
|
| XM_418264 | F:CGCCGAGGATTGGACACAG | 139 |
| R: CACGGAGTTCACCCTTCACAG | |||
|
| NM_204305 | F: CATCACAGCCACACAGAAGA | 122 |
| R: TGACTTTCCCCACAGCCTTA |
a Abbreviations: HSP25, heat shock protein 25; IL6, interleukin 6; VTG2, vitellogenin 2; MMP13, metalloproteinase 13; PTRF, polymerase I and transcript release factor; COL2A1, type II alpha 1 collagen; DDR2, discoidin domain receptor tyrosine kinase 2; KLF2, Kruppel-like factor 2; GAPDH, glyceraldehyde-3-phosphate dehydrogenase.
Fig 1Body temperature (A) and respiratory rate (B) of acute-heat-stressed and control hens during stress and recovery periods.
Data are mean ± standard error (n = 12; n = 6 and n = 3 in groups with 2-h and 6-h recovery after heat stress, respectively). * Values differed between heat-stressed and control groups (p < 0.05).
Fig 2Venn diagram analysis of 219 upregulated (A) and 187 downregulated (B) genes in the small yellow follicles of broiler-type Taiwan country chickens with 38°C acute heat stress for 2 h and recovery for 0, 2, and 6 h.
H2R0, recovery for 0 h after heat stress; H2R2, recovery for 2 h after heat stress; H2R6, recovery for 6 h after heat stress.
Fig 3Classification of differentially expressed genes in small yellow follicles of broiler-type B strain Taiwan country chickens with 38°C acute heat stress for 2 h and recovery for 0, 2, and 6 h by cellular components (A), biological processes (B), and molecular functions (C).
Only the 212 genes with known functional definitions in the Gene Ontology and PANTHER databases were included.
Fig 4Network analysis of the differentially expressed genes in small yellow follicles of heat-stressed broiler-type B strain Taiwan country chickens.
(A) H2R0, recovered for 0 h after heat stress; (B) H2R2, recovered for 2 h after heat stress; (C) H2R6, recovered for 6 h after heat stress.
Multiples of changes of significantly differentially expressed genes in small yellow follicles of broiler-type B strain Taiwan country chickens after acute heat stress determined using microarray and quantitative reverse transcription polymerase chain reaction analyses.
| Fold change | Gene | |||||||
|---|---|---|---|---|---|---|---|---|
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| H2R0/CTL | ||||||||
| M | 34.42 | 2.54 | 8.88 | 0.76 | 2.18 | 0.68 | 0.41 | 0.32 |
| Q | 54.40 | 1.93 | 3.37 | 0.96 | 0.91 | 0.81 | 1.09 | 0.27 |
| H2R2/CTL | ||||||||
| M | 38.20 | 2.11 | 1.21 | 3.21 | 2.08 | 0.98 | 0.82 | 0.95 |
| Q | 36.39 | 3.05 | 1.01 | 3.40 | 0.84 | 0.48 | 3.98 | 0.32 |
| H2R6/CTL | ||||||||
| M | 10.46 | 0.96 | 1.75 | 0.73 | 2.03 | 0.43 | 0.41 | 0.43 |
| Q | 8.40 | 1.82 | 1.65 | 0.82 | 0.74 | 0.53 | 0.94 | 0.34 |
* Multiples of changes of two-fold or higher increase or decrease were defined as different (p < 0.05). The fold expression or repression of the target gene were normalized using glyceraldehyde-3-phosphate dehydrogenase as an internal control gene.
a Abbreviations: HSP25, heat shock protein 25; IL6, interleukin 6; VTG2, vitellogenin 2; MMP13, metalloproteinase 13; PTRF, polymerase I and transcript release factor; COL2A1, type II alpha 1 collagen; DDR2, discoidin domain receptor tyrosine kinase 2; KLF2, Kruppel-like factor 2.