Literature DB >> 26587713

Local vibrational coherences drive the primary photochemistry of vision.

Philip J M Johnson1, Alexei Halpin1, Takefumi Morizumi2, Valentyn I Prokhorenko3, Oliver P Ernst2,4, R J Dwayne Miller1,3.   

Abstract

The role of vibrational coherence-concerted vibrational motion on the excited-state potential energy surface-in the isomerization of retinal in the protein rhodopsin remains elusive, despite considerable experimental and theoretical efforts. We revisited this problem with resonant ultrafast heterodyne-detected transient-grating spectroscopy. The enhanced sensitivity that this technique provides allows us to probe directly the primary photochemical reaction of vision with sufficient temporal and spectral resolution to resolve all the relevant nuclear dynamics of the retinal chromophore during isomerization. We observed coherent photoproduct formation on a sub-50 fs timescale, and recovered a host of vibrational modes of the retinal chromophore that modulate the transient-grating signal during the isomerization reaction. Through Fourier filtering and subsequent time-domain analysis of the transient vibrational dynamics, the excited-state nuclear motions that drive the isomerization reaction were identified, and comprise stretching, torsional and out-of-plane wagging motions about the local C11=C12 isomerization coordinate.

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Year:  2015        PMID: 26587713     DOI: 10.1038/nchem.2398

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  43 in total

1.  The retinal conformation and its environment in rhodopsin in light of a new 2.2 A crystal structure.

Authors:  Tetsuji Okada; Minoru Sugihara; Ana-Nicoleta Bondar; Marcus Elstner; Peter Entel; Volker Buss
Journal:  J Mol Biol       Date:  2004-09-10       Impact factor: 5.469

2.  Bicycle-pedal model for the first step in the vision process.

Authors:  A Warshel
Journal:  Nature       Date:  1976-04-22       Impact factor: 49.962

3.  Photochemical reaction dynamics of the primary event of vision studied by means of a hybrid molecular simulation.

Authors:  Shigehiko Hayashi; Emad Tajkhorshid; Klaus Schulten
Journal:  Biophys J       Date:  2009-01       Impact factor: 4.033

4.  Ground- and excited-state vibrational coherence dynamics in Bacteriorhodopsin probed with degenerate four-wave-mixing experiments.

Authors:  Jan Philip Kraack; Tiago Buckup; Norbert Hampp; Marcus Motzkus
Journal:  Chemphyschem       Date:  2011-06-20       Impact factor: 3.102

5.  Product formation in rhodopsin by fast hydrogen motions.

Authors:  Oliver Weingart; Piero Altoè; Marco Stenta; Andrea Bottoni; Giorgio Orlandi; Marco Garavelli
Journal:  Phys Chem Chem Phys       Date:  2011-01-18       Impact factor: 3.676

6.  Mode-specificity of vibrationally coherent internal conversion in rhodopsin during the primary visual event.

Authors:  Christoph Schnedermann; Matz Liebel; Philipp Kukura
Journal:  J Am Chem Soc       Date:  2015-02-20       Impact factor: 15.419

7.  Evidence for the Two-State-Two-Mode model in retinal protonated Schiff-bases from pump degenerate four-wave-mixing experiments.

Authors:  Jan Philip Kraack; Tiago Buckup; Marcus Motzkus
Journal:  Phys Chem Chem Phys       Date:  2012-09-18       Impact factor: 3.676

8.  Modelling vibrational coherence in the primary rhodopsin photoproduct.

Authors:  O Weingart; M Garavelli
Journal:  J Chem Phys       Date:  2012-12-14       Impact factor: 3.488

9.  The photocycle and ultrafast vibrational dynamics of bacteriorhodopsin in lipid nanodiscs.

Authors:  Philip J M Johnson; Alexei Halpin; Takefumi Morizumi; Leonid S Brown; Valentyn I Prokhorenko; Oliver P Ernst; R J Dwayne Miller
Journal:  Phys Chem Chem Phys       Date:  2014-09-01       Impact factor: 3.676

10.  The photosensitivities of visual pigments in the presence of hydroxylamine.

Authors:  H J Dartnall
Journal:  Vision Res       Date:  1968-04       Impact factor: 1.886

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  29 in total

1.  Photochemistry: A coherent picture of vision.

Authors:  Richard A Mathies
Journal:  Nat Chem       Date:  2015-12       Impact factor: 24.427

2.  Relationship between Excited State Lifetime and Isomerization Quantum Yield in Animal Rhodopsins: Beyond the One-Dimensional Landau-Zener Model.

Authors:  Mohsen M T El-Tahawy; Artur Nenov; Oliver Weingart; Massimo Olivucci; Marco Garavelli
Journal:  J Phys Chem Lett       Date:  2018-06-06       Impact factor: 6.475

3.  Evolution of nonspectral rhodopsin function at high altitudes.

Authors:  Gianni M Castiglione; Frances E Hauser; Brian S Liao; Nathan K Lujan; Alexander Van Nynatten; James M Morrow; Ryan K Schott; Nihar Bhattacharyya; Sarah Z Dungan; Belinda S W Chang
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-22       Impact factor: 11.205

4.  Quantum-classical model of retinal photoisomerization reaction in visual pigment rhodopsin.

Authors:  V D Lakhno; A S Shigaev; T B Feldman; V A Nadtochenko; M A Ostrovsky
Journal:  Dokl Biochem Biophys       Date:  2017-01-06       Impact factor: 0.788

5.  What has light ever done for chemistry?

Authors:  Ksenija Glusac
Journal:  Nat Chem       Date:  2016-07-21       Impact factor: 24.427

Review 6.  Shedding new light on the generation of the visual chromophore.

Authors:  Krzysztof Palczewski; Philip D Kiser
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-05       Impact factor: 11.205

7.  Coherent ultrafast lattice-directed reaction dynamics of triiodide anion photodissociation.

Authors:  Rui Xian; Gastón Corthey; David M Rogers; Carole A Morrison; Valentyn I Prokhorenko; Stuart A Hayes; R J Dwayne Miller
Journal:  Nat Chem       Date:  2017-03-27       Impact factor: 24.427

8.  Coherent control of an opsin in living brain tissue.

Authors:  Kush Paul; Parijat Sengupta; Eugene D Ark; Haohua Tu; Youbo Zhao; Stephen A Boppart
Journal:  Nat Phys       Date:  2017-09-18       Impact factor: 20.034

9.  Z-isomerization of retinoids through combination of monochromatic photoisomerization and metal catalysis.

Authors:  Shirin Kahremany; Christopher Lane Sander; Gregory P Tochtrop; Adam Kubas; Krzysztof Palczewski
Journal:  Org Biomol Chem       Date:  2019-08-28       Impact factor: 3.876

10.  Optical resonance imaging: An optical analog to MRI with sub-diffraction-limited capabilities.

Authors:  Marco A Allodi; Peter D Dahlberg; Richard J Mazuski; Hunter C Davis; John P Otto; Gregory S Engel
Journal:  ACS Photonics       Date:  2016-11-08       Impact factor: 7.529

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