Literature DB >> 26583987

Ab Initio Extension of the AMOEBA Polarizable Force Field to Fe(2.).

David Semrouni1, William C Isley1, Carine Clavaguéra2, Jean-Pierre Dognon3, Christopher J Cramer1, Laura Gagliardi1.   

Abstract

We extend the AMOEBA polarizable molecular mechanics force field to the Fe(2+) cation in its singlet, triplet, and quintet spin states. Required parameters are obtained either directly from first principles calculations or optimized so as to reproduce corresponding interaction energy components in a hexaaquo environment derived from quantum mechanical energy decomposition analyses. We assess the importance of the damping of point-dipole polarization at short distance as well as the influence of charge-transfer for metal-water interactions in hydrated Fe(2+); this analysis informs the selection of model systems employed for parametrization. We validate our final Fe(2+) model through comparison of molecular dynamics (MD) simulations to available experimental data for aqueous ferrous ion in its quintet electronic ground state.

Entities:  

Year:  2013        PMID: 26583987     DOI: 10.1021/ct400237r

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  6 in total

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Authors:  Pengfei Li; Kenneth M Merz
Journal:  Chem Rev       Date:  2017-01-03       Impact factor: 60.622

2.  Hydration Gibbs free energies of open and closed shell trivalent lanthanide and actinide cations from polarizable molecular dynamics.

Authors:  Aude Marjolin; Christophe Gourlaouen; Carine Clavaguéra; Pengyu Y Ren; Jean-Philip Piquemal; Jean-Pierre Dognon
Journal:  J Mol Model       Date:  2014-10-09       Impact factor: 1.810

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Journal:  J Phys Chem A       Date:  2018-07-18       Impact factor: 2.781

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Authors:  Petri Peuravaara; Jouni Karjalainen; Jianfeng Zhu; Jiří Mareš; Perttu Lantto; Juha Vaara
Journal:  Sci Rep       Date:  2018-05-04       Impact factor: 4.379

5.  Extending the Nonbonded Cationic Dummy Model to Account for Ion-Induced Dipole Interactions.

Authors:  Qinghua Liao; Anna Pabis; Birgit Strodel; Shina Caroline Lynn Kamerlin
Journal:  J Phys Chem Lett       Date:  2017-10-23       Impact factor: 6.475

6.  Computational investigation of O2 diffusion through an intra-molecular tunnel in AlkB; influence of polarization on O2 transport.

Authors:  Hedieh Torabifard; G Andrés Cisneros
Journal:  Chem Sci       Date:  2017-07-05       Impact factor: 9.825

  6 in total

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