Literature DB >> 2657402

The Xenopus laevis U2 gene distal sequence element (enhancer) is composed of four subdomains that can act independently and are partly functionally redundant.

G Tebb1, I W Mattaj.   

Abstract

The sequences involved in enhancement of transcription of the Xenopus U2 small nuclear RNA gene by the distal sequence element (DSE) of its promoter were analyzed in detail by microinjection of mutant genes into Xenopus oocytes. The DSE was shown to be roughly 60 base pairs long. Within this region, four motifs were found to contribute to DSE function: an ATGCAAAT octamer sequence, an SpI binding site, and two additional motifs which, since they are related in sequence, may bind the same transcription factor. These motifs were named D2 (for DSE; U2). Both the octamer sequence and the SpI site bound nuclear factors in vitro, but no factor binding to the D2 motifs was detected. All four elements were independently capable of enhancing transcription of the U2 gene to some extent. Furthermore, when assayed under both competitive and noncompetitive conditions, the individual units of the DSE displayed functional redundancy.

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Year:  1989        PMID: 2657402      PMCID: PMC362587          DOI: 10.1128/mcb.9.4.1682-1690.1989

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  46 in total

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Authors:  D J Galas; A Schmitz
Journal:  Nucleic Acids Res       Date:  1978-09       Impact factor: 16.971

2.  A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.

Authors:  M M Bradford
Journal:  Anal Biochem       Date:  1976-05-07       Impact factor: 3.365

3.  Expression of a beta-globin gene is enhanced by remote SV40 DNA sequences.

Authors:  J Banerji; S Rusconi; W Schaffner
Journal:  Cell       Date:  1981-12       Impact factor: 41.582

4.  A tissue-specific transcription enhancer element is located in the major intron of a rearranged immunoglobulin heavy chain gene.

Authors:  S D Gillies; S L Morrison; V T Oi; S Tonegawa
Journal:  Cell       Date:  1983-07       Impact factor: 41.582

5.  A lymphocyte-specific cellular enhancer is located downstream of the joining region in immunoglobulin heavy chain genes.

Authors:  J Banerji; L Olson; W Schaffner
Journal:  Cell       Date:  1983-07       Impact factor: 41.582

6.  Host-specific activation of transcription by tandem repeats from simian virus 40 and Moloney murine sarcoma virus.

Authors:  L A Laimins; G Khoury; C Gorman; B Howard; P Gruss
Journal:  Proc Natl Acad Sci U S A       Date:  1982-11       Impact factor: 11.205

7.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

8.  A control region in the center of the 5S RNA gene directs specific initiation of transcription: II. The 3' border of the region.

Authors:  D F Bogenhagen; S Sakonju; D D Brown
Journal:  Cell       Date:  1980-01       Impact factor: 41.582

9.  Multiple point mutations affecting the simian virus 40 enhancer.

Authors:  H Weiher; M König; P Gruss
Journal:  Science       Date:  1983-02-11       Impact factor: 47.728

10.  Differential expression of multiple U1 small nuclear RNAs in oocytes and embryos of Xenopus laevis.

Authors:  D J Forbes; M W Kirschner; D Caput; J E Dahlberg; E Lund
Journal:  Cell       Date:  1984-10       Impact factor: 41.582

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  15 in total

1.  U4B snRNA gene enhancer activity requires functional octamer and SPH motifs.

Authors:  Z Zamrod; W E Stumph
Journal:  Nucleic Acids Res       Date:  1990-12-25       Impact factor: 16.971

2.  Differential protein-DNA interactions at the promoter and enhancer regions of developmentally regulated U4 snRNA genes.

Authors:  J H Miyake; I W Botros; W E Stumph
Journal:  Gene Expr       Date:  1992

3.  Octamer and SPH motifs in the U1 enhancer cooperate to activate U1 RNA gene expression.

Authors:  K A Roebuck; D P Szeto; K P Green; Q N Fan; W E Stumph
Journal:  Mol Cell Biol       Date:  1990-01       Impact factor: 4.272

4.  Binding of a liver-specific factor to the human albumin gene promoter and enhancer.

Authors:  M Frain; E Hardon; G Ciliberto; J M Sala-Trepat
Journal:  Mol Cell Biol       Date:  1990-03       Impact factor: 4.272

5.  Staf, a promiscuous activator for enhanced transcription by RNA polymerases II and III.

Authors:  M Schaub; E Myslinski; C Schuster; A Krol; P Carbon
Journal:  EMBO J       Date:  1997-01-02       Impact factor: 11.598

6.  Two distinct domains in Staf to selectively activate small nuclear RNA-type and mRNA promoters.

Authors:  C Schuster; A Krol; P Carbon
Journal:  Mol Cell Biol       Date:  1998-05       Impact factor: 4.272

7.  Structural requirements for the functional activity of a U1 snRNA gene enhancer.

Authors:  C H Cheung; Q N Fan; W E Stumph
Journal:  Nucleic Acids Res       Date:  1993-01-25       Impact factor: 16.971

8.  Functional characterization of elements in a human U6 small nuclear RNA gene distal control region.

Authors:  D A Danzeiser; O Urso; G R Kunkel
Journal:  Mol Cell Biol       Date:  1993-08       Impact factor: 4.272

9.  Cooperation between CCAAT and octamer motifs in the distal sequence element of the rat U3 small nucleolar RNA promoter.

Authors:  R A Ach; A M Weiner
Journal:  Nucleic Acids Res       Date:  1991-08-11       Impact factor: 16.971

10.  The 5S rDNA high dynamism in Diplodus sargus is a transposon-mediated mechanism. Comparison with other multigene families and Sparidae species.

Authors:  Manuel A Merlo; Ismael Cross; Manuel Manchado; Salvador Cárdenas; Laureana Rebordinos
Journal:  J Mol Evol       Date:  2013-01-26       Impact factor: 2.395

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