Literature DB >> 26567642

Dissipation in noisy chemical networks: The role of deficiency.

M Polettini1, A Wachtel1, M Esposito1.   

Abstract

We study the effect of intrinsic noise on the thermodynamic balance of complex chemical networks subtending cellular metabolism and gene regulation. A topological network property called deficiency, known to determine the possibility of complex behavior such as multistability and oscillations, is shown to also characterize the entropic balance. In particular, when deficiency is zero the average stochastic dissipation rate equals that of the corresponding deterministic model, where correlations are disregarded. In fact, dissipation can be reduced by the effect of noise, as occurs in a toy model of metabolism that we employ to illustrate our findings. This phenomenon highlights that there is a close interplay between deficiency and the activation of new dissipative pathways at low molecule numbers.

Mesh:

Year:  2015        PMID: 26567642     DOI: 10.1063/1.4935064

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  2 in total

1.  Deciphering noise amplification and reduction in open chemical reaction networks.

Authors:  Fabrizio Pucci; Marianne Rooman
Journal:  J R Soc Interface       Date:  2018-12-21       Impact factor: 4.118

2.  Solving moment hierarchies for chemical reaction networks.

Authors:  Supriya Krishnamurthy; Eric Smith
Journal:  J Phys A Math Theor       Date:  2017-09-20       Impact factor: 2.132

  2 in total

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