Literature DB >> 26567340

Genome-wide Screening of Regulators of Catalase Expression: ROLE OF A TRANSCRIPTION COMPLEX AND HISTONE AND tRNA MODIFICATION COMPLEXES ON ADAPTATION TO STRESS.

Patricia García1, Javier Encinar Del Dedo1, José Ayté2, Elena Hidalgo3.   

Abstract

In response to environmental cues, the mitogen-activated protein kinase Sty1-driven signaling cascade activates hundreds of genes to induce a robust anti-stress cellular response in fission yeast. Thus, upon stress imposition Sty1 transiently accumulates in the nucleus where it up-regulates transcription through the Atf1 transcription factor. Several regulators of transcription and translation have been identified as important to mount an integral response to oxidative stress, such as the Spt-Ada-Gcn5-acetyl transferase or Elongator complexes, respectively. With the aim of identifying new regulators of this massive gene expression program, we have used a GFP-based protein reporter and screened a fission yeast deletion collection using flow cytometry. We find that the levels of catalase fused to GFP, both before and after a threat of peroxides, are altered in hundreds of strains lacking components of chromatin modifiers, transcription complexes, and modulators of translation. Thus, the transcription elongation complex Paf1, the histone methylase Set1-COMPASS, and the translation-related Trm112 dimers are all involved in full expression of Ctt1-GFP and in wild-type tolerance to peroxides.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Schizosaccharomyces pombe; catalase; gene expression; stress response; transfer RNA (tRNA)

Mesh:

Substances:

Year:  2015        PMID: 26567340      PMCID: PMC4705398          DOI: 10.1074/jbc.M115.696658

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  37 in total

1.  The Paf1 complex is required for histone H3 methylation by COMPASS and Dot1p: linking transcriptional elongation to histone methylation.

Authors:  Nevan J Krogan; Jim Dover; Adam Wood; Jessica Schneider; Jonathan Heidt; Marry Ann Boateng; Kimberly Dean; Owen W Ryan; Ashkan Golshani; Mark Johnston; Jack F Greenblatt; Ali Shilatifard
Journal:  Mol Cell       Date:  2003-03       Impact factor: 17.970

2.  The Rtf1 component of the Paf1 transcriptional elongation complex is required for ubiquitination of histone H2B.

Authors:  Huck Hui Ng; Sudhanshu Dole; Kevin Struhl
Journal:  J Biol Chem       Date:  2003-07-21       Impact factor: 5.157

3.  The Paf1 complex is essential for histone monoubiquitination by the Rad6-Bre1 complex, which signals for histone methylation by COMPASS and Dot1p.

Authors:  Adam Wood; Jessica Schneider; Jim Dover; Mark Johnston; Ali Shilatifard
Journal:  J Biol Chem       Date:  2003-07-21       Impact factor: 5.157

4.  Activation of the redox sensor Pap1 by hydrogen peroxide requires modulation of the intracellular oxidant concentration.

Authors:  Ana P Vivancos; Esther A Castillo; Nic Jones; José Ayté; Elena Hidalgo
Journal:  Mol Microbiol       Date:  2004-06       Impact factor: 3.501

5.  Single atom modification (O-->S) of tRNA confers ribosome binding.

Authors:  S S Ashraf; E Sochacka; R Cain; R Guenther; A Malkiewicz; P F Agris
Journal:  RNA       Date:  1999-02       Impact factor: 4.942

6.  Heterologous modules for efficient and versatile PCR-based gene targeting in Schizosaccharomyces pombe.

Authors:  J Bähler; J Q Wu; M S Longtine; N G Shah; A McKenzie; A B Steever; A Wach; P Philippsen; J R Pringle
Journal:  Yeast       Date:  1998-07       Impact factor: 3.239

7.  The modification of the wobble base of tRNAGlu modulates the translation rate of glutamic acid codons in vivo.

Authors:  M K Krüger; S Pedersen; T G Hagervall; M A Sørensen
Journal:  J Mol Biol       Date:  1998-12-04       Impact factor: 5.469

8.  Methylation of histone H3 by Set2 in Saccharomyces cerevisiae is linked to transcriptional elongation by RNA polymerase II.

Authors:  Nevan J Krogan; Minkyu Kim; Amy Tong; Ashkan Golshani; Gerard Cagney; Veronica Canadien; Dawn P Richards; Bryan K Beattie; Andrew Emili; Charles Boone; Ali Shilatifard; Stephen Buratowski; Jack Greenblatt
Journal:  Mol Cell Biol       Date:  2003-06       Impact factor: 4.272

9.  The many roles of the conserved eukaryotic Paf1 complex in regulating transcription, histone modifications, and disease states.

Authors:  Brett N Tomson; Karen M Arndt
Journal:  Biochim Biophys Acta       Date:  2012-09-06

10.  Global transcriptional responses of fission yeast to environmental stress.

Authors:  Dongrong Chen; W Mark Toone; Juan Mata; Rachel Lyne; Gavin Burns; Katja Kivinen; Alvis Brazma; Nic Jones; Jürg Bähler
Journal:  Mol Biol Cell       Date:  2003-01       Impact factor: 4.138

View more
  4 in total

Review 1.  tRNA modification dynamics from individual organisms to metaepitranscriptomics of microbiomes.

Authors:  Wen Zhang; Marcus Foo; A Murat Eren; Tao Pan
Journal:  Mol Cell       Date:  2022-01-14       Impact factor: 17.970

2.  Bases of antisense lncRNA-associated regulation of gene expression in fission yeast.

Authors:  Maxime Wery; Camille Gautier; Marc Descrimes; Mayuko Yoda; Valérie Migeot; Damien Hermand; Antonin Morillon
Journal:  PLoS Genet       Date:  2018-07-05       Impact factor: 5.917

3.  A stress-blinded Atf1 can fully assemble heterochromatin in a RNAi-independent minimal mat locus but impairs directionality of mat2/3 switching.

Authors:  Rodrigo Fraile; Laura Sánchez-Mir; Guillem Murciano-Julià; José Ayté; Elena Hidalgo
Journal:  iScience       Date:  2022-08-02

4.  Distinct role of subunits of the Arabidopsis RNA polymerase II elongation factor PAF1C in transcriptional reprogramming.

Authors:  Simon Obermeyer; Richard Stöckl; Tobias Schnekenburger; Christoph Moehle; Uwe Schwartz; Klaus D Grasser
Journal:  Front Plant Sci       Date:  2022-09-29       Impact factor: 6.627

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.