Literature DB >> 26557798

A Series of Computational Neuroscience Labs Increases Comfort with MATLAB.

David F Nichols1.   

Abstract

Computational simulations allow for a low-cost, reliable means to demonstrate complex and often times inaccessible concepts to undergraduates. However, students without prior computer programming training may find working with code-based simulations to be intimidating and distracting. A series of computational neuroscience labs involving the Hodgkin-Huxley equations, an Integrate-and-Fire model, and a Hopfield Memory network were used in an undergraduate neuroscience laboratory component of an introductory level course. Using short focused surveys before and after each lab, student comfort levels were shown to increase drastically from a majority of students being uncomfortable or with neutral feelings about working in the MATLAB environment to a vast majority of students being comfortable working in the environment. Though change was reported within each lab, a series of labs was necessary in order to establish a lasting high level of comfort. Comfort working with code is important as a first step in acquiring computational skills that are required to address many questions within neuroscience.

Entities:  

Keywords:  Computational simulations; Hodgkin-Huxley equations; Hopfield Memory network; Integrate-and-Fire model; MATLAB

Year:  2015        PMID: 26557798      PMCID: PMC4640485     

Source DB:  PubMed          Journal:  J Undergrad Neurosci Educ        ISSN: 1544-2896


  13 in total

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Authors:  J J Hopfield
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Journal:  J Undergrad Neurosci Educ       Date:  2014-03-15

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Journal:  J Undergrad Neurosci Educ       Date:  2012-10-15

5.  Effective use of computer simulations in an introductory neuroscience laboratory.

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6.  Teaching Neurophysiology to Undergraduates using Neurons in Action.

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7.  MATLAB-based Simulation of Whole-Cell and Single-Channel Currents.

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8.  Characterizing Mystery Cell Lines: Student-driven Research Projects in an Undergraduate Neuroscience Laboratory Course.

Authors:  Michele L Lemons
Journal:  J Undergrad Neurosci Educ       Date:  2012-03-15

9.  Successful integration of interactive neuroscience simulations into a non-laboratory sensation & perception course.

Authors:  Uta Wolfe
Journal:  J Undergrad Neurosci Educ       Date:  2009-06-15

10.  Teaching basic principles of neuroscience with computer simulations.

Authors:  Evyatar Av-Ron; John H Byrne; Douglas A Baxter
Journal:  J Undergrad Neurosci Educ       Date:  2006-06-15
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  3 in total

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Journal:  J Undergrad Neurosci Educ       Date:  2017-06-15

2.  Are Electrode Caps Worth the Investment? An Evaluation of EEG Methods in Undergraduate Neuroscience Laboratory Courses and Research.

Authors:  Stephanie M Shields; Caitlin E Morse; E Drew Applebaugh; Tyler L Muntz; David F Nichols
Journal:  J Undergrad Neurosci Educ       Date:  2016-04-15

3.  Open Source Software Tools for Teaching Neuroscience.

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