Literature DB >> 26553790

Identification and Annotation of Lipid Species in Metabolomics Studies Need Improvement.

Gerhard Liebisch1, Christer S Ejsing2, Kim Ekroos3.   

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Year:  2015        PMID: 26553790     DOI: 10.1373/clinchem.2015.244830

Source DB:  PubMed          Journal:  Clin Chem        ISSN: 0009-9147            Impact factor:   8.327


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  13 in total

Review 1.  Common cases of improper lipid annotation using high-resolution tandem mass spectrometry data and corresponding limitations in biological interpretation.

Authors:  Jeremy P Koelmel; Candice Z Ulmer; Christina M Jones; Richard A Yost; John A Bowden
Journal:  Biochim Biophys Acta Mol Cell Biol Lipids       Date:  2017-03-02       Impact factor: 4.698

2.  Integrated Structural Modeling of Full-Length LRH-1 Reveals Inter-domain Interactions Contribute to Receptor Structure and Function.

Authors:  Corey D Seacrist; Georg Kuenze; Reece M Hoffmann; Brandon E Moeller; John E Burke; Jens Meiler; Raymond D Blind
Journal:  Structure       Date:  2020-05-19       Impact factor: 5.006

3.  Gas-Phase Ion-Ion Reactions for Lipid Identification in Biological Tissue Sections.

Authors:  Boone M Prentice
Journal:  Methods Mol Biol       Date:  2022

4.  Retention dependences support highly confident identification of lipid species in human plasma by reversed-phase UHPLC/MS.

Authors:  Zuzana Vaňková; Ondřej Peterka; Michaela Chocholoušková; Denise Wolrab; Robert Jirásko; Michal Holčapek
Journal:  Anal Bioanal Chem       Date:  2021-07-09       Impact factor: 4.142

5.  Proposal for a common nomenclature for fragment ions in mass spectra of lipids.

Authors:  Josch K Pauling; Martin Hermansson; Jürgen Hartler; Klaus Christiansen; Sandra F Gallego; Bing Peng; Robert Ahrends; Christer S Ejsing
Journal:  PLoS One       Date:  2017-11-21       Impact factor: 3.240

6.  MS-based lipidomics of human blood plasma: a community-initiated position paper to develop accepted guidelines.

Authors:  Bo Burla; Makoto Arita; Masanori Arita; Anne K Bendt; Amaury Cazenave-Gassiot; Edward A Dennis; Kim Ekroos; Xianlin Han; Kazutaka Ikeda; Gerhard Liebisch; Michelle K Lin; Tze Ping Loh; Peter J Meikle; Matej Orešič; Oswald Quehenberger; Andrej Shevchenko; Federico Torta; Michael J O Wakelam; Craig E Wheelock; Markus R Wenk
Journal:  J Lipid Res       Date:  2018-08-16       Impact factor: 5.922

7.  Deciphering lipid structures based on platform-independent decision rules.

Authors:  Jürgen Hartler; Alexander Triebl; Andreas Ziegl; Martin Trötzmüller; Gerald N Rechberger; Oana A Zeleznik; Kathrin A Zierler; Federico Torta; Amaury Cazenave-Gassiot; Markus R Wenk; Alexander Fauland; Craig E Wheelock; Aaron M Armando; Oswald Quehenberger; Qifeng Zhang; Michael J O Wakelam; Guenter Haemmerle; Friedrich Spener; Harald C Köfeler; Gerhard G Thallinger
Journal:  Nat Methods       Date:  2017-10-23       Impact factor: 28.547

8.  Untargeted lipidomic analysis to broadly characterize the effects of pathogenic and non-pathogenic staphylococci on mammalian lipids.

Authors:  Naren Gajenthra Kumar; Daniel Contaifer; Paul R S Baker; Kim Ekroos; Kimberly K Jefferson; Dayanjan S Wijesinghe
Journal:  PLoS One       Date:  2018-10-31       Impact factor: 3.240

Review 9.  Reshaping Lipid Biochemistry by Pushing Barriers in Structural Lipidomics.

Authors:  Tiffany Porta Siegel; Kim Ekroos; Shane R Ellis
Journal:  Angew Chem Int Ed Engl       Date:  2019-02-18       Impact factor: 15.336

10.  LipidFinder 2.0: advanced informatics pipeline for lipidomics discovery applications.

Authors:  Jorge Alvarez-Jarreta; Patricia R S Rodrigues; Eoin Fahy; Anne O'Connor; Anna Price; Caroline Gaud; Simon Andrews; Paul Benton; Gary Siuzdak; Jade I Hawksworth; Maria Valdivia-Garcia; Stuart M Allen; Valerie B O'Donnell
Journal:  Bioinformatics       Date:  2021-06-16       Impact factor: 6.937

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