Literature DB >> 26546269

Using in vivo imaging to measure RNA mobility in Xenopus laevis oocytes.

Erin A Powrie1, Veronica Ciocanel2, Jill A Kreiling1, James A Gagnon3, Bjӧrn Sandstede2, Kimberly L Mowry4.   

Abstract

RNA localization in the Xenopus oocyte is responsible for the establishment of polarity during oogenesis as well as the specification of germ layers during embryogenesis. However, the inability to monitor mRNA localization in live vertebrate oocytes has posed a major barrier to understanding the mechanisms driving directional transport. Here we describe a method for imaging MS2 tagged RNA in live Xenopus oocytes to study the dynamics of RNA localization. We also focus on methods for implementing and analyzing FRAP data. This protocol is optimized for imaging of the RNAs in stage II oocytes but it can be adapted to study dynamics of other molecules during oogenesis. Using this approach, mobility can be measured in different regions of the oocyte, enabling the direct observation of molecular dynamics throughout the oocyte.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Confocal microscopy; Fluorescence recovery after photobleaching; Live cell imaging; Oogenesis; RNA localization; Xenopus

Mesh:

Substances:

Year:  2015        PMID: 26546269      PMCID: PMC4808392          DOI: 10.1016/j.ymeth.2015.11.003

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  13 in total

1.  Analysis of binding reactions by fluorescence recovery after photobleaching.

Authors:  Brian L Sprague; Robert L Pego; Diana A Stavreva; James G McNally
Journal:  Biophys J       Date:  2004-06       Impact factor: 4.033

2.  Vegetal messenger RNA localization directed by a 340-nt RNA sequence element in Xenopus oocytes.

Authors:  K L Mowry; D A Melton
Journal:  Science       Date:  1992-02-21       Impact factor: 47.728

3.  Imaging dynamic interactions between spliceosomal proteins and pre-mRNA in living cells.

Authors:  José Rino; Robert M Martin; Teresa Carvalho; Maria Carmo-Fonseca
Journal:  Methods       Date:  2013-08-19       Impact factor: 3.608

Review 4.  Principles and roles of mRNA localization in animal development.

Authors:  Caroline Medioni; Kimberly Mowry; Florence Besse
Journal:  Development       Date:  2012-09       Impact factor: 6.868

5.  Oogenesis in Xenopus laevis (Daudin). I. Stages of oocyte development in laboratory maintained animals.

Authors:  J N Dumont
Journal:  J Morphol       Date:  1972-02       Impact factor: 1.804

6.  Mobility measurement by analysis of fluorescence photobleaching recovery kinetics.

Authors:  D Axelrod; D E Koppel; J Schlessinger; E Elson; W W Webb
Journal:  Biophys J       Date:  1976-09       Impact factor: 4.033

7.  Visualization of mRNA localization in Xenopus oocytes.

Authors:  James A Gagnon; Kimberly L Mowry
Journal:  Methods Mol Biol       Date:  2011

Review 8.  Molecular motors: directing traffic during RNA localization.

Authors:  James A Gagnon; Kimberly L Mowry
Journal:  Crit Rev Biochem Mol Biol       Date:  2011-04-11       Impact factor: 8.250

9.  Localization of RNAs to the mitochondrial cloud in Xenopus oocytes through entrapment and association with endoplasmic reticulum.

Authors:  Patrick Chang; Jan Torres; Raymond A Lewis; Kimberly L Mowry; Evelyn Houliston; Mary Lou King
Journal:  Mol Biol Cell       Date:  2004-08-03       Impact factor: 4.138

10.  Localization of ASH1 mRNA particles in living yeast.

Authors:  E Bertrand; P Chartrand; M Schaefer; S M Shenoy; R H Singer; R M Long
Journal:  Mol Cell       Date:  1998-10       Impact factor: 17.970

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  5 in total

Review 1.  Fluorescence techniques in developmental biology.

Authors:  Sapthaswaran Veerapathiran; Thorsten Wohland
Journal:  J Biosci       Date:  2018-07       Impact factor: 1.826

2.  Analysis of Active Transport by Fluorescence Recovery after Photobleaching.

Authors:  Maria-Veronica Ciocanel; Jill A Kreiling; James A Gagnon; Kimberly L Mowry; Björn Sandstede
Journal:  Biophys J       Date:  2017-04-25       Impact factor: 4.033

Review 3.  Role of Zinc (Zn) in Human Reproduction: A Journey from Initial Spermatogenesis to Childbirth.

Authors:  Sundaram Vickram; Karunakaran Rohini; Subramanian Srinivasan; David Nancy Veenakumari; Kumar Archana; Krishnan Anbarasu; Palanivelu Jeyanthi; Sundaram Thanigaivel; Govindarajan Gulothungan; Nanmaran Rajendiran; Padmalayam Sadanandan Srikumar
Journal:  Int J Mol Sci       Date:  2021-02-22       Impact factor: 5.923

4.  Multivalent interactions with RNA drive recruitment and dynamics in biomolecular condensates in Xenopus oocytes.

Authors:  Sarah E Cabral; Jessica P Otis; Kimberly L Mowry
Journal:  iScience       Date:  2022-07-21

5.  Cell Rover-a miniaturized magnetostrictive antenna for wireless operation inside living cells.

Authors:  Baju Joy; Yubin Cai; David C Bono; Deblina Sarkar
Journal:  Nat Commun       Date:  2022-09-22       Impact factor: 17.694

  5 in total

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