Literature DB >> 26542762

In vitro selection of RNA aptamers against CA125 tumor marker in ovarian cancer and its study by optical biosensing.

Ilaria Lamberti1, Simona Scarano2, Carla Lucia Esposito3, Antonio Antoccia4, Giovanni Antonini4, Caterina Tanzarella1, Vittorio De Franciscis5, Maria Minunni6.   

Abstract

Early identification of neoplastic diseases is essential to achieve timely therapeutic interventions and significantly reduce the mortality of patients. A well-known biomarker is the Cancer Antigen 125 (CA125) or 16 mucin (MUC 16), a glycoprotein of the human family of mucins, already used for the diagnostic and prognostic evaluation of ovarian cancer. Therefore, the detection of CA125 to now remains a promising tool in the early diagnosis of this tumor. In this paper, we describe the development of RNA aptamers that bind with high affinity the tumor antigen CA125. We performed eight cycles of selection against CA125 purified protein. The selected aptamers were cloned and sequenced and the binding properties of the most promising sequences were studied by Real Time PCR and Surface Plasmon Resonance (SPR) to evaluate their ability in targeting CA125 protein with perspective applications in aptamer-based bioassays.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Aptamers; CA125; SELEX; Surface Plasmon Resonance

Mesh:

Substances:

Year:  2015        PMID: 26542762     DOI: 10.1016/j.ymeth.2015.10.022

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  6 in total

1.  An electrochemical aptasensing platform for carbohydrate antigen 125 based on the use of flower-like gold nanostructures and target-triggered strand displacement amplification.

Authors:  Jishun Chen; Wanbao Hu; Jian Wei; Fei Yu; Lun Wu; Ceming Wang; Wei Wang; Shenyuan Zuo; Bing Shang; Qinhua Chen
Journal:  Mikrochim Acta       Date:  2019-05-30       Impact factor: 5.833

2.  Optimization of RNA Aptamer SELEX Methods: Improved Aptamer Transcript 3'-End Homogeneity, PAGE Purification Yield, and Target-Bound Aptamer RNA Recovery.

Authors:  Chandan Narayan; Suresh Veeramani; William H Thiel
Journal:  Nucleic Acid Ther       Date:  2021-11-10       Impact factor: 5.486

Review 3.  In vitro evolution of chemically-modified nucleic acid aptamers: Pros and cons, and comprehensive selection strategies.

Authors:  Farhana Lipi; Suxiang Chen; Madhuri Chakravarthy; Shilpa Rakesh; Rakesh N Veedu
Journal:  RNA Biol       Date:  2016-10-07       Impact factor: 4.652

4.  Selection of DNA Aptamers for Ovarian Cancer Biomarker CA125 Using One-Pot SELEX and High-Throughput Sequencing.

Authors:  Delia J Scoville; Tae Kyu Brian Uhm; Jamie A Shallcross; Rebecca J Whelan
Journal:  J Nucleic Acids       Date:  2017-02-09

Review 5.  Nanotechnology and Glycosaminoglycans: Paving the Way Forward for Ovarian Cancer Intervention.

Authors:  Yasar Hoosen; Priyamvada Pradeep; Pradeep Kumar; Lisa C du Toit; Yahya E Choonara; Viness Pillay
Journal:  Int J Mol Sci       Date:  2018-03-04       Impact factor: 5.923

Review 6.  Developments of Riboswitches and Toehold Switches for Molecular Detection-Biosensing and Molecular Diagnostics.

Authors:  Tin Hoang Trung Chau; Dung Hoang Anh Mai; Diep Ngoc Pham; Hoa Thi Quynh Le; Eun Yeol Lee
Journal:  Int J Mol Sci       Date:  2020-04-30       Impact factor: 5.923

  6 in total

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