Literature DB >> 26537824

DNA translocation through single-layer boron nitride nanopores.

Zonglin Gu1, Yuanzhao Zhang, Binquan Luan, Ruhong Zhou.   

Abstract

Ultra-thin nanopores have become promising biological sensors because of their outstanding signal-to-noise ratio and spatial resolution. Here, we show that boron nitride (BN), which is a new two-dimensional (2D) material similar to graphene, could be utilized for making a nanopore with an atomic thickness. Using an all-atom molecular dynamics simulation, we investigated the dynamics of DNA translocation through the BN nanopore. The results of our simulations demonstrated that it is possible to detect different double-stranded DNA (dsDNA) sequences from the recording of ionic currents through the pore during the DNA translocation. Surprisingly, opposite to results for a graphene nanopore, we found the calculated blockage current for poly(A-T)40 in a BN nanopore to be less than that for poly(G-C)40. Also in contrast with the case of graphene nanopores, dsDNA models moved smoothly and in an unimpeded manner through the BN nanopores in the simulations, suggesting a potential advantage for using BN nanopores to design stall-free sequencing devices. BN nanopores, which display several properties (such as being hydrophilic and non-metallic) that are superior to those of graphene, are thus expected to find applications in the next generation of high-speed and low-cost biological sensors.

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Year:  2015        PMID: 26537824     DOI: 10.1039/c5sm02197a

Source DB:  PubMed          Journal:  Soft Matter        ISSN: 1744-683X            Impact factor:   3.679


  5 in total

Review 1.  Flow of DNA in micro/nanofluidics: From fundamentals to applications.

Authors:  Lea Rems; Durgesh Kawale; L James Lee; Pouyan E Boukany
Journal:  Biomicrofluidics       Date:  2016-07-20       Impact factor: 2.800

2.  DNA Sequencing by Hexagonal Boron Nitride Nanopore: A Computational Study.

Authors:  Liuyang Zhang; Xianqiao Wang
Journal:  Nanomaterials (Basel)       Date:  2016-06-06       Impact factor: 5.076

3.  Revealing Topological Barriers against Knot Untying in Thermal and Mechanical Protein Unfolding by Molecular Dynamics Simulations.

Authors:  Yan Xu; Runshan Kang; Luyao Ren; Lin Yang; Tongtao Yue
Journal:  Biomolecules       Date:  2021-11-13

4.  Instability and translocation through nanopores of DNA interacting with single-layer materials.

Authors:  Mansoor H Alshehri; Faisal Z Duraihem; Mohammed A Aba Oud
Journal:  RSC Adv       Date:  2020-10-07       Impact factor: 4.036

5.  Fabrication of Low Noise Borosilicate Glass Nanopores for Single Molecule Sensing.

Authors:  Jayesh A Bafna; Gautam V Soni
Journal:  PLoS One       Date:  2016-06-10       Impact factor: 3.240

  5 in total

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