Literature DB >> 26527279

Analysis of the Histone H3.1 Interactome: A Suitable Chaperone for the Right Event.

Eric I Campos1, Arne H Smits2, Young-Hoon Kang3, Sébastien Landry4, Thelma M Escobar1, Shruti Nayak5, Beatrix M Ueberheide6, Daniel Durocher4, Michiel Vermeulen2, Jerard Hurwitz3, Danny Reinberg7.   

Abstract

Despite minimal disparity at the sequence level, mammalian H3 variants bind to distinct sets of polypeptides. Although histone H3.1 predominates in cycling cells, our knowledge of the soluble complexes that it forms en route to deposition or following eviction from chromatin remains limited. Here, we provide a comprehensive analysis of the H3.1-binding proteome, with emphasis on its interactions with histone chaperones and components of the replication fork. Quantitative mass spectrometry revealed 170 protein interactions, whereas a large-scale biochemical fractionation of H3.1 and associated enzymatic activities uncovered over twenty stable protein complexes in dividing human cells. The sNASP and ASF1 chaperones play pivotal roles in the processing of soluble histones but do not associate with the active CDC45/MCM2-7/GINS (CMG) replicative helicase. We also find TONSL-MMS22L to function as a H3-H4 histone chaperone. It associates with the regulatory MCM5 subunit of the replicative helicase.
Copyright © 2015 Elsevier Inc. All rights reserved.

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Year:  2015        PMID: 26527279      PMCID: PMC4656108          DOI: 10.1016/j.molcel.2015.08.005

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  67 in total

1.  The histone chaperone facilitates chromatin transcription (FACT) protein maintains normal replication fork rates.

Authors:  Takuya Abe; Kazuto Sugimura; Yoshifumi Hosono; Yasunari Takami; Motomu Akita; Akari Yoshimura; Shusuke Tada; Tatsuo Nakayama; Hiromu Murofushi; Katsuzumi Okumura; Shunichi Takeda; Masami Horikoshi; Masayuki Seki; Takemi Enomoto
Journal:  J Biol Chem       Date:  2011-07-07       Impact factor: 5.157

2.  Requirement of RSF and FACT for transcription of chromatin templates in vitro.

Authors:  G LeRoy; G Orphanides; W S Lane; D Reinberg
Journal:  Science       Date:  1998-12-04       Impact factor: 47.728

3.  FACT, a factor that facilitates transcript elongation through nucleosomes.

Authors:  G Orphanides; G LeRoy; C H Chang; D S Luse; D Reinberg
Journal:  Cell       Date:  1998-01-09       Impact factor: 41.582

4.  A genome-wide camptothecin sensitivity screen identifies a mammalian MMS22L-NFKBIL2 complex required for genomic stability.

Authors:  Brenda C O'Connell; Britt Adamson; John R Lydeard; Mathew E Sowa; Alberto Ciccia; Andrea L Bredemeyer; Michael Schlabach; Steven P Gygi; Stephen J Elledge; J Wade Harper
Journal:  Mol Cell       Date:  2010-11-04       Impact factor: 17.970

5.  RNAi-based screening identifies the Mms22L-Nfkbil2 complex as a novel regulator of DNA replication in human cells.

Authors:  Wojciech Piwko; Michael H Olma; Michael Held; Julien N Bianco; Patrick G A Pedrioli; Kay Hofmann; Philippe Pasero; Daniel W Gerlich; Matthias Peter
Journal:  EMBO J       Date:  2010-11-26       Impact factor: 11.598

6.  POB3 is required for both transcription and replication in the yeast Saccharomyces cerevisiae.

Authors:  M B Schlesinger; T Formosa
Journal:  Genetics       Date:  2000-08       Impact factor: 4.562

7.  Nucleosomal DNA regulates the core-histone-binding subunit of the human Hat1 acetyltransferase.

Authors:  A Verreault; P D Kaufman; R Kobayashi; B Stillman
Journal:  Curr Biol       Date:  1998-01-15       Impact factor: 10.834

8.  Identification of the MMS22L-TONSL complex that promotes homologous recombination.

Authors:  Eris Duro; Cecilia Lundin; Katrine Ask; Luis Sanchez-Pulido; Thomas J MacArtney; Rachel Toth; Chris P Ponting; Anja Groth; Thomas Helleday; John Rouse
Journal:  Mol Cell       Date:  2010-11-04       Impact factor: 17.970

9.  The structural basis for MCM2-7 helicase activation by GINS and Cdc45.

Authors:  Alessandro Costa; Ivar Ilves; Nele Tamberg; Tatjana Petojevic; Eva Nogales; Michael R Botchan; James M Berger
Journal:  Nat Struct Mol Biol       Date:  2011-03-06       Impact factor: 15.369

10.  Sequential establishment of marks on soluble histones H3 and H4.

Authors:  Francisca Alvarez; Francisca Muñoz; Pierre Schilcher; Axel Imhof; Geneviève Almouzni; Alejandra Loyola
Journal:  J Biol Chem       Date:  2011-03-29       Impact factor: 5.157

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  35 in total

1.  Structural characterization of the Asf1-Rtt109 interaction and its role in histone acetylation.

Authors:  Lukas Lercher; Nataliya Danilenko; John Kirkpatrick; Teresa Carlomagno
Journal:  Nucleic Acids Res       Date:  2018-03-16       Impact factor: 16.971

Review 2.  Fly Fishing for Histones: Catch and Release by Histone Chaperone Intrinsically Disordered Regions and Acidic Stretches.

Authors:  Christopher Warren; David Shechter
Journal:  J Mol Biol       Date:  2017-06-10       Impact factor: 5.469

3.  A computational method using the random walk with restart algorithm for identifying novel epigenetic factors.

Authors:  JiaRui Li; Lei Chen; ShaoPeng Wang; YuHang Zhang; XiangYin Kong; Tao Huang; Yu-Dong Cai
Journal:  Mol Genet Genomics       Date:  2017-09-20       Impact factor: 3.291

Review 4.  Replication-Coupled Nucleosome Assembly in the Passage of Epigenetic Information and Cell Identity.

Authors:  Albert Serra-Cardona; Zhiguo Zhang
Journal:  Trends Biochem Sci       Date:  2017-12-29       Impact factor: 13.807

5.  STK38 kinase acts as XPO1 gatekeeper regulating the nuclear export of autophagy proteins and other cargoes.

Authors:  Alexandre Pj Martin; Maarten Jacquemyn; Joanna Lipecka; Cerina Chhuon; Vasily N Aushev; Brigitte Meunier; Manish K Singh; Nicolas Carpi; Matthieu Piel; Patrice Codogno; Alexander Hergovich; Maria Carla Parrini; Gerard Zalcman; Ida Chiara Guerrera; Dirk Daelemans; Jacques H Camonis
Journal:  EMBO Rep       Date:  2019-09-23       Impact factor: 8.807

6.  Bi-allelic Variants in TONSL Cause SPONASTRIME Dysplasia and a Spectrum of Skeletal Dysplasia Phenotypes.

Authors:  Lindsay C Burrage; John J Reynolds; Nissan Vida Baratang; Jennifer B Phillips; Jeremy Wegner; Ashley McFarquhar; Martin R Higgs; Audrey E Christiansen; Denise G Lanza; John R Seavitt; Mahim Jain; Xiaohui Li; David A Parry; Vandana Raman; David Chitayat; Ivan K Chinn; Alison A Bertuch; Lefkothea Karaviti; Alan E Schlesinger; Dawn Earl; Michael Bamshad; Ravi Savarirayan; Harsha Doddapaneni; Donna Muzny; Shalini N Jhangiani; Christine M Eng; Richard A Gibbs; Weimin Bi; Lisa Emrick; Jill A Rosenfeld; John Postlethwait; Monte Westerfield; Mary E Dickinson; Arthur L Beaudet; Emmanuelle Ranza; Celine Huber; Valérie Cormier-Daire; Wei Shen; Rong Mao; Jason D Heaney; Jordan S Orange; Débora Bertola; Guilherme L Yamamoto; Wagner A R Baratela; Merlin G Butler; Asim Ali; Mehdi Adeli; Daniel H Cohn; Deborah Krakow; Andrew P Jackson; Melissa Lees; Amaka C Offiah; Colleen M Carlston; John C Carey; Grant S Stewart; Carlos A Bacino; Philippe M Campeau; Brendan Lee
Journal:  Am J Hum Genet       Date:  2019-02-14       Impact factor: 11.025

7.  MGO3 and GIP1 act synergistically for the maintenance of centromeric cohesion.

Authors:  Morgane Batzenschlager; Anne-Catherine Schmit; Etienne Herzog; Joerg Fuchs; Veit Schubert; Guy Houlné; Marie-Edith Chabouté
Journal:  Nucleus       Date:  2017-01-02       Impact factor: 4.197

Review 8.  Asymmetric Histone Inheritance in Asymmetrically Dividing Stem Cells.

Authors:  Matthew Wooten; Rajesh Ranjan; Xin Chen
Journal:  Trends Genet       Date:  2019-11-18       Impact factor: 11.639

Review 9.  Histone chaperone networks shaping chromatin function.

Authors:  Colin M Hammond; Caroline B Strømme; Hongda Huang; Dinshaw J Patel; Anja Groth
Journal:  Nat Rev Mol Cell Biol       Date:  2017-01-05       Impact factor: 94.444

10.  Phospho-H1 Decorates the Inter-chromatid Axis and Is Evicted along with Shugoshin by SET during Mitosis.

Authors:  Swathi Krishnan; Arne H Smits; Michiel Vermeulen; Danny Reinberg
Journal:  Mol Cell       Date:  2017-08-03       Impact factor: 17.970

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