Literature DB >> 26527263

Crystallization and crystallographic analysis of an Arabidopsis nuclear proteinaceous RNase P.

Franziska Pinker1, Philippe Giegé2, Claude Sauter1.   

Abstract

RNase P activity is ubiquitous and involves the 5' maturation of precursor tRNAs. For a long time, it was thought that all RNases P were ribonucleoproteic enzymes. However, the characterization of RNase P in human mitochondria and in plants revealed a novel kind of RNase P composed of protein only, called PRORP for `proteinaceous RNase P'. Whereas in human mitochondria PRORP has two partners that are required for RNase P activity, PRORP proteins are active as single-subunit enzymes in plants. Three paralogues of PRORP are found in Arabidopsis thaliana. PRORP1 is responsible for RNase P in mitochondria and chloroplasts, while PRORP2 and PRORP3 are nuclear enzymes. Here, the purification and crystallization of the Arabidopsis PRORP2 protein are reported. Optimization of the initial crystallization conditions led to crystals that diffracted to 3 Å resolution.

Entities:  

Keywords:  PPR; RNase P; nuclear PRORP; tRNA maturation enzyme

Mesh:

Substances:

Year:  2015        PMID: 26527263      PMCID: PMC4631585          DOI: 10.1107/S2053230X15017033

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  17 in total

Review 1.  The enigma of ribonuclease P evolution.

Authors:  Enno Hartmann; Roland K Hartmann
Journal:  Trends Genet       Date:  2003-10       Impact factor: 11.639

2.  The NYN domains: novel predicted RNAses with a PIN domain-like fold.

Authors:  Vivek Anantharaman; L Aravind
Journal:  RNA Biol       Date:  2006-01-23       Impact factor: 4.652

Review 3.  A view of RNase P.

Authors:  Sidney Altman
Journal:  Mol Biosyst       Date:  2007-07-25

4.  RNase P without RNA: identification and functional reconstitution of the human mitochondrial tRNA processing enzyme.

Authors:  Johann Holzmann; Peter Frank; Esther Löffler; Keiryn L Bennett; Christopher Gerner; Walter Rossmanith
Journal:  Cell       Date:  2008-10-31       Impact factor: 41.582

5.  The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme.

Authors:  C Guerrier-Takada; K Gardiner; T Marsh; N Pace; S Altman
Journal:  Cell       Date:  1983-12       Impact factor: 41.582

Review 6.  Unexpected diversity of RNase P, an ancient tRNA processing enzyme: challenges and prospects.

Authors:  Lien B Lai; Agustín Vioque; Leif A Kirsebom; Venkat Gopalan
Journal:  FEBS Lett       Date:  2010-01-21       Impact factor: 4.124

7.  Novel mechanisms for maturation of chloroplast transfer RNA precursors.

Authors:  M J Wang; N W Davis; P Gegenheimer
Journal:  EMBO J       Date:  1988-06       Impact factor: 11.598

8.  Overview of the CCP4 suite and current developments.

Authors:  Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

9.  Structural insights into protein-only RNase P complexed with tRNA.

Authors:  Anthony Gobert; Franziska Pinker; Olivier Fuchsbauer; Bernard Gutmann; René Boutin; Pierre Roblin; Claude Sauter; Philippe Giegé
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

Review 10.  PPR proteins shed a new light on RNase P biology.

Authors:  Franziska Pinker; Géraldine Bonnard; Anthony Gobert; Bernard Gutmann; Kamel Hammani; Claude Sauter; Peter A Gegenheimer; Philippe Giegé
Journal:  RNA Biol       Date:  2013-06-19       Impact factor: 4.652

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  2 in total

1.  Biophysical analysis of Arabidopsis protein-only RNase P alone and in complex with tRNA provides a refined model of tRNA binding.

Authors:  Franziska Pinker; Cédric Schelcher; Pablo Fernandez-Millan; Anthony Gobert; Catherine Birck; Aurélien Thureau; Pierre Roblin; Philippe Giegé; Claude Sauter
Journal:  J Biol Chem       Date:  2017-07-10       Impact factor: 5.157

Review 2.  Mechanistic and Structural Studies of Protein-Only RNase P Compared to Ribonucleoproteins Reveal the Two Faces of the Same Enzymatic Activity.

Authors:  Cédric Schelcher; Claude Sauter; Philippe Giegé
Journal:  Biomolecules       Date:  2016-06-24
  2 in total

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