Literature DB >> 26526752

A river model to map convergent cancer evolution and guide therapy in RCC.

Elizabeth Y Wei1, James J Hsieh2.   

Abstract

Intratumoural heterogeneity in clear cell renal cell carcinoma (ccRCC) complicates identification and validation of biomarkers and thwarts attempts to improve precision medicine. Efforts to depict intratumoural heterogeneity and to pinpoint strategies for disease control resulted in the creation of the trunk-branch model of mutational cancer evolution, which emphasizes targeting trunk mutations. However, most patients with ccRCC receiving current therapeutics that target these mutations, such as inhibitors of vascular endothelial growth factors, eventually develop resistance. A novel paradigm might improve depiction of cancer evolution and advise therapeutic selection: the river model is based on findings from multiregion sequencing in samples from exceptional responders to mTOR inhibitors. The accumulating data on genotypic and phenotypic convergence in renal cell carcinoma and other malignancies can be used to examine how a mutable river model might best describe clinically significant phenotype-convergent events that could guide effective cancer control. This model originates from studying exceptional responders and its generalizability awaits validation.

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Year:  2015        PMID: 26526752     DOI: 10.1038/nrurol.2015.260

Source DB:  PubMed          Journal:  Nat Rev Urol        ISSN: 1759-4812            Impact factor:   14.432


  65 in total

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Journal:  Genetics       Date:  2006-04       Impact factor: 4.562

2.  Efficacy and safety of trastuzumab as a single agent in first-line treatment of HER2-overexpressing metastatic breast cancer.

Authors:  Charles L Vogel; Melody A Cobleigh; Debu Tripathy; John C Gutheil; Lyndsay N Harris; Louis Fehrenbacher; Dennis J Slamon; Maureen Murphy; William F Novotny; Michael Burchmore; Steven Shak; Stanford J Stewart; Michael Press
Journal:  J Clin Oncol       Date:  2002-02-01       Impact factor: 44.544

3.  The patterns and dynamics of genomic instability in metastatic pancreatic cancer.

Authors:  Peter J Campbell; Shinichi Yachida; Laura J Mudie; Philip J Stephens; Erin D Pleasance; Lucy A Stebbings; Laura A Morsberger; Calli Latimer; Stuart McLaren; Meng-Lay Lin; David J McBride; Ignacio Varela; Serena A Nik-Zainal; Catherine Leroy; Mingming Jia; Andrew Menzies; Adam P Butler; Jon W Teague; Constance A Griffin; John Burton; Harold Swerdlow; Michael A Quail; Michael R Stratton; Christine Iacobuzio-Donahue; P Andrew Futreal
Journal:  Nature       Date:  2010-10-28       Impact factor: 49.962

4.  A signature of chromosomal instability inferred from gene expression profiles predicts clinical outcome in multiple human cancers.

Authors:  Scott L Carter; Aron C Eklund; Isaac S Kohane; Lyndsay N Harris; Zoltan Szallasi
Journal:  Nat Genet       Date:  2006-08-20       Impact factor: 38.330

Review 5.  Cancer as an evolutionary and ecological process.

Authors:  Lauren M F Merlo; John W Pepper; Brian J Reid; Carlo C Maley
Journal:  Nat Rev Cancer       Date:  2006-11-16       Impact factor: 60.716

Review 6.  Intra-tumour heterogeneity: a looking glass for cancer?

Authors:  Andriy Marusyk; Vanessa Almendro; Kornelia Polyak
Journal:  Nat Rev Cancer       Date:  2012-04-19       Impact factor: 60.716

7.  Clinical and pathologic impact of select chromatin-modulating tumor suppressors in clear cell renal cell carcinoma.

Authors:  A Ari Hakimi; Ying-Bei Chen; James Wren; Mithat Gonen; Omar Abdel-Wahab; Adriana Heguy; Han Liu; Shugaku Takeda; Satish K Tickoo; Victor E Reuter; Martin H Voss; Robert J Motzer; Jonathan A Coleman; Emily H Cheng; Paul Russo; James J Hsieh
Journal:  Eur Urol       Date:  2012-09-27       Impact factor: 20.096

8.  Intratumor heterogeneity in localized lung adenocarcinomas delineated by multiregion sequencing.

Authors:  Jianjun Zhang; Junya Fujimoto; Jianhua Zhang; David C Wedge; Xingzhi Song; Jiexin Zhang; Sahil Seth; Chi-Wan Chow; Yu Cao; Curtis Gumbs; Kathryn A Gold; Neda Kalhor; Latasha Little; Harshad Mahadeshwar; Cesar Moran; Alexei Protopopov; Huandong Sun; Jiabin Tang; Xifeng Wu; Yuanqing Ye; William N William; J Jack Lee; John V Heymach; Waun Ki Hong; Stephen Swisher; Ignacio I Wistuba; P Andrew Futreal
Journal:  Science       Date:  2014-10-10       Impact factor: 47.728

Review 9.  Intratumor heterogeneity: evolution through space and time.

Authors:  Charles Swanton
Journal:  Cancer Res       Date:  2012-09-20       Impact factor: 12.701

Review 10.  Deciphering intratumor heterogeneity and temporal acquisition of driver events to refine precision medicine.

Authors:  Crispin Hiley; Elza C de Bruin; Nicholas McGranahan; Charles Swanton
Journal:  Genome Biol       Date:  2014-08-27       Impact factor: 13.583

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  28 in total

1.  Genomic landscape and evolution of metastatic chromophobe renal cell carcinoma.

Authors:  Jozefina Casuscelli; Nils Weinhold; Gunes Gundem; Lu Wang; Emily C Zabor; Esther Drill; Patricia I Wang; Gouri J Nanjangud; Almedina Redzematovic; Amrita M Nargund; Brandon J Manley; Maria E Arcila; Nicholas M Donin; John C Cheville; R Houston Thompson; Allan J Pantuck; Paul Russo; Emily H Cheng; William Lee; Satish K Tickoo; Irina Ostrovnaya; Chad J Creighton; Elli Papaemmanuil; Venkatraman E Seshan; A Ari Hakimi; James J Hsieh
Journal:  JCI Insight       Date:  2017-06-15

2.  Therapeutic Guide for mTOuRing through the Braided Kidney Cancer Genomic River.

Authors:  Martin H Voss; James J Hsieh
Journal:  Clin Cancer Res       Date:  2016-02-26       Impact factor: 12.531

3.  Tumor Xenografts of Human Clear Cell Renal Cell Carcinoma But Not Corresponding Cell Lines Recapitulate Clinical Response to Sunitinib: Feasibility of Using Biopsy Samples.

Authors:  Yiyu Dong; Brandon J Manley; Maria F Becerra; Almedina Redzematovic; Jozefina Casuscelli; Daniel M Tennenbaum; Ed Reznik; Song Han; Nicole Benfante; Ying-Bei Chen; Maria E Arcila; Omer Aras; Martin H Voss; Darren R Feldman; Robert J Motzer; Nicola Fabbri; John H Healey; Patrick J Boland; Mohit Chawla; Jeremy C Durack; Chung-Han Lee; Jonathan A Coleman; Paul Russo; A Ari Hakimi; Emily H Cheng; James J Hsieh
Journal:  Eur Urol Focus       Date:  2016-08-25

4.  Mechanistically distinct cancer-associated mTOR activation clusters predict sensitivity to rapamycin.

Authors:  Jianing Xu; Can G Pham; Steven K Albanese; Yiyu Dong; Toshinao Oyama; Chung-Han Lee; Vanessa Rodrik-Outmezguine; Zhan Yao; Song Han; David Chen; Daniel L Parton; John D Chodera; Neal Rosen; Emily H Cheng; James J Hsieh
Journal:  J Clin Invest       Date:  2016-08-02       Impact factor: 14.808

Review 5.  Renal cell carcinoma.

Authors:  James J Hsieh; Mark P Purdue; Sabina Signoretti; Charles Swanton; Laurence Albiges; Manuela Schmidinger; Daniel Y Heng; James Larkin; Vincenzo Ficarra
Journal:  Nat Rev Dis Primers       Date:  2017-03-09       Impact factor: 52.329

6.  The Efficacy of Lenvatinib Plus Everolimus in Patients with Metastatic Renal Cell Carcinoma Exhibiting Primary Resistance to Front-Line Targeted Therapy or Immunotherapy.

Authors:  Lana Hamieh; Rachel L Beck; Valerie H Le; James J Hsieh
Journal:  Clin Genitourin Cancer       Date:  2020-03-14       Impact factor: 2.872

7.  Genomic Biomarkers of a Randomized Trial Comparing First-line Everolimus and Sunitinib in Patients with Metastatic Renal Cell Carcinoma.

Authors:  James J Hsieh; David Chen; Patricia I Wang; Mahtab Marker; Almedina Redzematovic; Ying-Bei Chen; S Duygu Selcuklu; Nils Weinhold; Nancy Bouvier; Kety H Huberman; Umesh Bhanot; Michael S Chevinsky; Parul Patel; Patrizia Pinciroli; Helen H Won; Daoqi You; Agnes Viale; William Lee; A Ari Hakimi; Michael F Berger; Nicholas D Socci; Emily H Cheng; Jennifer Knox; Martin H Voss; Maurizio Voi; Robert J Motzer
Journal:  Eur Urol       Date:  2016-10-15       Impact factor: 20.096

Review 8.  Precision medicine from the renal cancer genome.

Authors:  Yasser Riazalhosseini; Mark Lathrop
Journal:  Nat Rev Nephrol       Date:  2016-10-03       Impact factor: 28.314

9.  Hyperpolarized MRI Visualizes Warburg Effects and Predicts Treatment Response to mTOR Inhibitors in Patient-Derived ccRCC Xenograft Models.

Authors:  Yiyu Dong; Roozbeh Eskandari; Chelsea Ray; Kristin L Granlund; Lidia Dos Santos-Cunha; Vesselin Z Miloushev; Sui Seng Tee; Sangmoo Jeong; Omer Aras; Ying-Bei Chen; Emily H Cheng; James J Hsieh; Kayvan R Keshari
Journal:  Cancer Res       Date:  2018-11-20       Impact factor: 12.701

10.  The difficulty in selecting patients for cytoreductive nephrectomy: An evaluation of previously described predictive models.

Authors:  Brandon J Manley; Daniel M Tennenbaum; Emily A Vertosick; James J Hsieh; Daniel D Sjoberg; Melissa Assel; Nicole E Benfante; Seth A Strope; Eric Kim; Jozefina Casuscelli; Maria F Becerra; Jonathan A Coleman; Abraham Ari Hakimi; Paul Russo
Journal:  Urol Oncol       Date:  2016-08-24       Impact factor: 3.498

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